prot_M-pyrifera_M_contig8002.18766.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8002.18766.1
Unique Nameprot_M-pyrifera_M_contig8002.18766.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length167
Homology
BLAST of mRNA_M-pyrifera_M_contig8002.18766.1 vs. uniprot
Match: D8LC33_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC33_ECTSI)

HSP 1 Score: 184 bits (468), Expect = 9.120e-54
Identity = 100/170 (58.82%), Postives = 119/170 (70.00%), Query Frame = 0
Query:    1 MGVNDVATLVLEDNEGITYDFYTFQVVDFDAESGAMALERRNLFRCGLFRYSCALENVSKLEITEEDVYTVSAHAFEHMRQTKEFGLRVLFSVPLGPGRPSFPSPHS---TNASIPASFSSNSMPALSGGTSAGXXXXXXXXGTHGAPTLLGSRGPRRRRWGLLLSRVCL 167
            MGVNDVATLVLEDN+GITYDFYTFQVV+FDA+SGAMAL+R NLF CG+FRYSCALEN+SK+EITE +VY +SAHAFEH+RQTKEFGLRV+FSVPLG  + +   P S    NA +  S    S P+  G   +             A     +  PRRRRWG+L  R+ L
Sbjct:  132 MGVNDVATLVLEDNQGITYDFYTFQVVEFDADSGAMALDRWNLFHCGVFRYSCALENISKVEITEGNVYMMSAHAFEHLRQTKEFGLRVIFSVPLGASQAATAHPRSPRPNNAGMNFSDPGGSSPSSDGDGISAVSGTVGGAPVARAAARRAAGAPRRRRWGVLFRRLLL 301          
BLAST of mRNA_M-pyrifera_M_contig8002.18766.1 vs. uniprot
Match: A0A6H5JJL0_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJL0_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 6.110e-36
Identity = 80/151 (52.98%), Postives = 102/151 (67.55%), Query Frame = 0
Query:   25 QVVDFDAESGAMALERRNLFRCGLFRYSCALENVSKLEITEEDVYTVSAHAFEHMRQTKEFGLRVLFSVPLGPGRPSFPSPHS---TNASIPASFSSNSMPALSGGTSAGXXXXXXXXGTHGAPTLLGSR-----GPRRRRWGLLLSRVCL 167
            +VV+FDA+SGAMAL+R NLF CG+FRYSCALEN+SK+EITE +VY +SAHAFEH+RQTKEFGLRV+FSVPLG  + +   P S   +NA++  S +  S P+  G   +G           GAP   G+       PRRRRWG+L  R+ L
Sbjct:  354 EVVEFDADSGAMALDRWNLFNCGVFRYSCALENISKIEITEGNVYMMSAHAFEHLRQTKEFGLRVIFSVPLGASQETTAHPRSPRPSNAAMNLSDTDGSSPSSDGDGISGVSGTVG-----GAPVARGTARRAVGAPRRRRWGVLFRRLLL 499          
BLAST of mRNA_M-pyrifera_M_contig8002.18766.1 vs. uniprot
Match: A0A7S2Y0H0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0H0_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 1.580e-7
Identity = 32/74 (43.24%), Postives = 44/74 (59.46%), Query Frame = 0
Query:   25 QVVDFDAESGAMALERRNLFRCGLFRYSCALENVSKLEITEEDVYTVSA---HAFEHMRQTKEFGLRVLFSVPL 95
            +V  FDAESG   LER NL       Y+CALEN+S L+I  + V+T ++   H   H+ + +EF LRVL   P+
Sbjct:  214 EVAVFDAESGVFRLERSNLVSRPQVLYTCALENISALQIAGDTVFTFTSSRRHTDNHLMERQEFSLRVLLCRPM 287          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8002.18766.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LC33_ECTSI9.120e-5458.82RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JJL0_9PHAE6.110e-3652.98RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S2Y0H0_9STRA1.580e-743.24Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8002contigM-pyrifera_M_contig8002:6731..11490 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8002.18766.1mRNA_M-pyrifera_M_contig8002.18766.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8002 253..11490 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8002.18766.1 ID=prot_M-pyrifera_M_contig8002.18766.1|Name=mRNA_M-pyrifera_M_contig8002.18766.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=167bp
MGVNDVATLVLEDNEGITYDFYTFQVVDFDAESGAMALERRNLFRCGLFR
YSCALENVSKLEITEEDVYTVSAHAFEHMRQTKEFGLRVLFSVPLGPGRP
SFPSPHSTNASIPASFSSNSMPALSGGTSAGSGGGGGGNGTHGAPTLLGS
RGPRRRRWGLLLSRVCL
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