prot_M-pyrifera_M_contig7984.18731.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig7984.18731.1
Unique Nameprot_M-pyrifera_M_contig7984.18731.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length82
Homology
BLAST of mRNA_M-pyrifera_M_contig7984.18731.1 vs. uniprot
Match: D7FXA2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXA2_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 4.320e-54
Identity = 78/81 (96.30%), Postives = 80/81 (98.77%), Query Frame = 0
Query:    1 MNRSWDHIQNKYIGTGHSDTTKFEWATNQHRDSIASHIGHSDLLTYFAVAENNAVGRVRYQLLEKMLQPCGPPPAKDDDDV 81
            MNRSWDHIQNKY+GTGHSDTTKFEWATNQHRDSIASHIGHSDLL YFAVAENNAVGRVRYQLLEKMLQPCGPPPAKDDDD+
Sbjct:   42 MNRSWDHIQNKYVGTGHSDTTKFEWATNQHRDSIASHIGHSDLLMYFAVAENNAVGRVRYQLLEKMLQPCGPPPAKDDDDI 122          
BLAST of mRNA_M-pyrifera_M_contig7984.18731.1 vs. uniprot
Match: A0A662XDD1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XDD1_9STRA)

HSP 1 Score: 142 bits (358), Expect = 5.310e-42
Identity = 58/79 (73.42%), Postives = 72/79 (91.14%), Query Frame = 0
Query:    1 MNRSWDHIQNKYIGTGHSDTTKFEWATNQHRDSIASHIGHSDLLTYFAVAENNAVGRVRYQLLEKMLQPCGPPPAKDDD 79
            +NR W+H+Q KY+GTGH+DTTKFEWA NQHRD++ASH+GHSD+L +FAVAEN A+GRVRY +LEKMLQPCGPPP K++D
Sbjct:   59 VNRQWEHLQAKYVGTGHADTTKFEWAVNQHRDTLASHLGHSDMLAFFAVAENEAIGRVRYNMLEKMLQPCGPPPQKEED 137          
BLAST of mRNA_M-pyrifera_M_contig7984.18731.1 vs. uniprot
Match: H3G531_PHYRM (Splicing factor subunit n=20 Tax=Oomycota TaxID=4762 RepID=H3G531_PHYRM)

HSP 1 Score: 140 bits (353), Expect = 6.720e-42
Identity = 57/79 (72.15%), Postives = 72/79 (91.14%), Query Frame = 0
Query:    1 MNRSWDHIQNKYIGTGHSDTTKFEWATNQHRDSIASHIGHSDLLTYFAVAENNAVGRVRYQLLEKMLQPCGPPPAKDDD 79
            +NR W+H+Q KY+GTGH+DTTKFEWA NQHRD++ASH+GHSD+L YFAVAEN ++GRVRY +LEKMLQPCGPPP K+++
Sbjct:    9 INRQWEHLQAKYVGTGHADTTKFEWAVNQHRDTLASHLGHSDMLAYFAVAENESMGRVRYNMLEKMLQPCGPPPQKEEE 87          
BLAST of mRNA_M-pyrifera_M_contig7984.18731.1 vs. uniprot
Match: A0A6G0XHV2_9STRA (Splicing factor subunit n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XHV2_9STRA)

HSP 1 Score: 140 bits (352), Expect = 9.260e-42
Identity = 57/78 (73.08%), Postives = 71/78 (91.03%), Query Frame = 0
Query:    1 MNRSWDHIQNKYIGTGHSDTTKFEWATNQHRDSIASHIGHSDLLTYFAVAENNAVGRVRYQLLEKMLQPCGPPPAKDD 78
            +NR W+H+Q+KY+GTGH+DT+KFEWA NQHRD++ASHIGHSD+L YFAVAEN ++GRVR+ +LEKMLQPCGPPP K D
Sbjct:    8 INRQWEHLQSKYVGTGHADTSKFEWAVNQHRDTLASHIGHSDMLAYFAVAENESIGRVRFNMLEKMLQPCGPPPKKQD 85          
BLAST of mRNA_M-pyrifera_M_contig7984.18731.1 vs. uniprot
Match: A0A8J5IQX8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IQX8_9STRA)

HSP 1 Score: 140 bits (353), Expect = 2.400e-41
Identity = 57/79 (72.15%), Postives = 72/79 (91.14%), Query Frame = 0
Query:    1 MNRSWDHIQNKYIGTGHSDTTKFEWATNQHRDSIASHIGHSDLLTYFAVAENNAVGRVRYQLLEKMLQPCGPPPAKDDD 79
            +NR W+H+Q KY+GTGH+DTTKFEWA NQHRD++ASH+GHSD+L YFAVAEN ++GRVRY +LEKMLQPCGPPP K+++
Sbjct:   51 INRQWEHLQAKYVGTGHADTTKFEWAVNQHRDTLASHLGHSDMLAYFAVAENESMGRVRYNMLEKMLQPCGPPPQKEEE 129          
BLAST of mRNA_M-pyrifera_M_contig7984.18731.1 vs. uniprot
Match: A0A1W0A9Q9_9STRA (Splicing factor subunit n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A9Q9_9STRA)

HSP 1 Score: 139 bits (349), Expect = 2.660e-41
Identity = 56/79 (70.89%), Postives = 71/79 (89.87%), Query Frame = 0
Query:    1 MNRSWDHIQNKYIGTGHSDTTKFEWATNQHRDSIASHIGHSDLLTYFAVAENNAVGRVRYQLLEKMLQPCGPPPAKDDD 79
            +NR W+H+Q KY+GTGH+DT+KFEWA NQHRD++ASHIGH D+L YFAVAEN ++GRVRY +LEKM+QPCGPPP K++D
Sbjct:    8 INRQWEHLQAKYVGTGHADTSKFEWAVNQHRDTLASHIGHKDMLAYFAVAENESIGRVRYAMLEKMVQPCGPPPIKEED 86          
BLAST of mRNA_M-pyrifera_M_contig7984.18731.1 vs. uniprot
Match: K3WSC6_GLOUD (Splicing factor subunit n=4 Tax=Pythiaceae TaxID=4782 RepID=K3WSC6_GLOUD)

HSP 1 Score: 138 bits (347), Expect = 5.360e-41
Identity = 56/79 (70.89%), Postives = 71/79 (89.87%), Query Frame = 0
Query:    1 MNRSWDHIQNKYIGTGHSDTTKFEWATNQHRDSIASHIGHSDLLTYFAVAENNAVGRVRYQLLEKMLQPCGPPPAKDDD 79
            +NR W+H+Q KY+GTGH+DTTKFEWA NQHRD++ASH+GH D+L+YFA AEN AVGRV++ +LEKMLQPCGPPP K+D+
Sbjct:    8 INRQWEHLQAKYVGTGHADTTKFEWAVNQHRDTLASHLGHYDMLSYFAAAENEAVGRVKFNMLEKMLQPCGPPPQKEDE 86          
BLAST of mRNA_M-pyrifera_M_contig7984.18731.1 vs. uniprot
Match: W7TXH4_9STRA (Splicing factor subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXH4_9STRA)

HSP 1 Score: 137 bits (346), Expect = 8.330e-41
Identity = 61/81 (75.31%), Postives = 71/81 (87.65%), Query Frame = 0
Query:    1 MNRSWDHIQNKYIGTGHSDTTKFEWATNQHRDSIASHIGHSDLLTYFAVAENNAVGRVRYQLLEKMLQPCGPPPA-KDDDD 80
            +NRSW+H+QNKY+GTGH D TK EW TNQHRD+ A+H+GH D L Y AVA+N+AVGRVRYQLLEKMLQPCGPPPA KDD+D
Sbjct:    8 INRSWEHLQNKYVGTGHPDLTKHEWLTNQHRDTYATHLGHHDQLAYIAVAQNDAVGRVRYQLLEKMLQPCGPPPAAKDDED 88          
BLAST of mRNA_M-pyrifera_M_contig7984.18731.1 vs. uniprot
Match: A0A835ZDN9_9STRA (Splicing factor subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDN9_9STRA)

HSP 1 Score: 137 bits (346), Expect = 8.330e-41
Identity = 57/80 (71.25%), Postives = 72/80 (90.00%), Query Frame = 0
Query:    1 MNRSWDHIQNKYIGTGHSDTTKFEWATNQHRDSIASHIGHSDLLTYFAVAENNAVGRVRYQLLEKMLQPCGPPPAKDDDD 80
             N+SWDHIQ K++GTGH DT+KFEWATNQHRD+IAS++GHSD++ Y++VA+N + GRVRY L+EKMLQPCGPPP KDD+D
Sbjct:    8 FNKSWDHIQAKFVGTGHGDTSKFEWATNQHRDTIASNVGHSDIIDYYSVAQNLSQGRVRYNLMEKMLQPCGPPPPKDDED 87          
BLAST of mRNA_M-pyrifera_M_contig7984.18731.1 vs. uniprot
Match: F0YCR2_AURAN (Splicing factor subunit n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YCR2_AURAN)

HSP 1 Score: 137 bits (345), Expect = 9.630e-41
Identity = 58/74 (78.38%), Postives = 68/74 (91.89%), Query Frame = 0
Query:    1 MNRSWDHIQNKYIGTGHSDTTKFEWATNQHRDSIASHIGHSDLLTYFAVAENNAVGRVRYQLLEKMLQPCGPPP 74
            +NRSWDHIQ KY+GTGHSD TKFEWA+NQHRDSIASH+GH D++TYFAVA+ +++GR RY LLEKMLQPCGPPP
Sbjct:    8 INRSWDHIQAKYVGTGHSDMTKFEWASNQHRDSIASHLGHGDIMTYFAVAQGDSIGRTRYALLEKMLQPCGPPP 81          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7984.18731.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXA2_ECTSI4.320e-5496.30Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A662XDD1_9STRA5.310e-4273.42Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
H3G531_PHYRM6.720e-4272.15Splicing factor subunit n=20 Tax=Oomycota TaxID=47... [more]
A0A6G0XHV2_9STRA9.260e-4273.08Splicing factor subunit n=1 Tax=Aphanomyces euteic... [more]
A0A8J5IQX8_9STRA2.400e-4172.15Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]
A0A1W0A9Q9_9STRA2.660e-4170.89Splicing factor subunit n=1 Tax=Thraustotheca clav... [more]
K3WSC6_GLOUD5.360e-4170.89Splicing factor subunit n=4 Tax=Pythiaceae TaxID=4... [more]
W7TXH4_9STRA8.330e-4175.31Splicing factor subunit n=2 Tax=Monodopsidaceae Ta... [more]
A0A835ZDN9_9STRA8.330e-4171.25Splicing factor subunit n=1 Tax=Tribonema minus Ta... [more]
F0YCR2_AURAN9.630e-4178.38Splicing factor subunit n=1 Tax=Aureococcus anopha... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017089Splicing factor 3B, subunit 5PIRSFPIRSF037010SF3B5coord: 1..80
e-value: 3.4E-35
score: 118.0
IPR009846Splicing factor 3B subunit 5/RDS3 complex subunit 10PFAMPF07189SF3b10coord: 2..74
e-value: 1.1E-35
score: 121.6
IPR009846Splicing factor 3B subunit 5/RDS3 complex subunit 10PANTHERPTHR20978FAMILY NOT NAMEDcoord: 2..78
NoneNo IPR availablePANTHERPTHR20978:SF0SPLICING FACTOR 3B SUBUNIT 5coord: 2..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7984contigM-pyrifera_M_contig7984:2598..4475 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7984.18731.1mRNA_M-pyrifera_M_contig7984.18731.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig7984 2577..5258 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig7984.18731.1 ID=prot_M-pyrifera_M_contig7984.18731.1|Name=mRNA_M-pyrifera_M_contig7984.18731.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=82bp
MNRSWDHIQNKYIGTGHSDTTKFEWATNQHRDSIASHIGHSDLLTYFAVA
ENNAVGRVRYQLLEKMLQPCGPPPAKDDDDV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017089Splicing_factor_3B_subunit_5
IPR009846SF3b5/RDS3-10