prot_M-pyrifera_M_contig7982.18725.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig7982.18725.1
Unique Nameprot_M-pyrifera_M_contig7982.18725.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length92
Homology
BLAST of mRNA_M-pyrifera_M_contig7982.18725.1 vs. uniprot
Match: D7FYS9_ECTSI (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYS9_ECTSI)

HSP 1 Score: 143 bits (361), Expect = 1.470e-42
Identity = 76/93 (81.72%), Postives = 81/93 (87.10%), Query Frame = 0
Query:    1 MATPVGAGPIIQDGAPKGGFPKIQISRQLPSTRGPRGAVVLGLVTVTMAVGYYKLGQANKGRRALRHEKRLARIALMPMLQVSS-RQCSLAVR 92
            MATPVG GPI+QD APKGGFPK+QISRQLPS RGPRG+VVLGLVTVTMAVGYYKLGQANK RRA +HEKRLARIALMPMLQ    R+  LA R
Sbjct:    1 MATPVGTGPIVQDVAPKGGFPKVQISRQLPSGRGPRGSVVLGLVTVTMAVGYYKLGQANKARRAEQHEKRLARIALMPMLQAEEDRKAVLAKR 93          
BLAST of mRNA_M-pyrifera_M_contig7982.18725.1 vs. uniprot
Match: I0YQ01_COCSC (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=2 Tax=Coccomyxa TaxID=41891 RepID=I0YQ01_COCSC)

HSP 1 Score: 71.2 bits (173), Expect = 9.930e-14
Identity = 34/73 (46.58%), Postives = 50/73 (68.49%), Query Frame = 0
Query:    9 PIIQDGAPKGGFPKIQISRQLPSTRGPRGAVVLGLVTVTMAVGYYKLGQANKGRRALRHEKRLARIALMPMLQ 81
            P++QDG P GGFP I+ +R++PST GP G  +  +    MA G+Y++G+ N+ RRAL+ EK   R A+ P+LQ
Sbjct:   19 PVLQDGPPPGGFPSIRYARRIPST-GPTGFTLFAVGAAVMAFGFYRVGEFNRYRRALKAEKMTMRTAIYPVLQ 90          
BLAST of mRNA_M-pyrifera_M_contig7982.18725.1 vs. uniprot
Match: A0A7J7IHL6_9RHOD (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IHL6_9RHOD)

HSP 1 Score: 58.5 bits (140), Expect = 8.690e-9
Identity = 31/82 (37.80%), Postives = 44/82 (53.66%), Query Frame = 0
Query:   11 IQDGAPKGGFPKIQISRQLPSTRGPRGAVVLGLVTVTMAVGYYKLGQANKGRRALRHEKRLARIALMPMLQVSSRQCSLAVR 92
            +QDG P GG+P++ + R LP   GP    +     V MA G++++G  N  RR L  E++  R AL+P LQ    Q  L  R
Sbjct:   25 VQDGPPAGGYPRLDVRRNLPRNVGPSATFLFLGGAVVMAYGFWRVGTFNVHRRELLEERQQVRAALVPFLQAEEDQRYLEAR 106          
BLAST of mRNA_M-pyrifera_M_contig7982.18725.1 vs. uniprot
Match: M1UR10_CYAM1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=2 Tax=cellular organisms TaxID=131567 RepID=M1UR10_CYAM1)

HSP 1 Score: 57.8 bits (138), Expect = 1.760e-8
Identity = 28/71 (39.44%), Postives = 40/71 (56.34%), Query Frame = 0
Query:   11 IQDGAPKGGFPKIQISRQLPSTRGPRGAVVLGLVTVTMAVGYYKLGQANKGRRALRHEKRLARIALMPMLQ 81
            +QDG P GG+P++ + R LP   GP    +     + MA G++++G  N  RR L  E+R  R AL P LQ
Sbjct:   25 LQDGPPPGGYPRLDVRRNLPRNVGPSATALFLGSALVMAYGFWRMGNYNLHRRELLEERRQVRAALAPFLQ 95          
BLAST of mRNA_M-pyrifera_M_contig7982.18725.1 vs. uniprot
Match: F0YB35_AURAN (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YB35_AURAN)

HSP 1 Score: 55.5 bits (132), Expect = 1.270e-7
Identity = 29/72 (40.28%), Postives = 46/72 (63.89%), Query Frame = 0
Query:   10 IIQDGAPKGGFPKIQISRQLPSTRGPRGAVVLGLVTVTMAVGYYKLGQANKGRRALRHEKRLARIALMPMLQ 81
            ++QD  P GG+P + I ++    RGP G ++     +T+A G+Y++GQ N  R A + EKR AR+A++P LQ
Sbjct:   18 VVQDMPPAGGYPDV-IFKKATINRGPDGWMIWVGSLLTVAFGFYRVGQCNLERNAAKKEKREARMAIVPYLQ 88          
BLAST of mRNA_M-pyrifera_M_contig7982.18725.1 vs. uniprot
Match: M2XA08_GALSU (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XA08_GALSU)

HSP 1 Score: 52.8 bits (125), Expect = 1.630e-6
Identity = 31/74 (41.89%), Postives = 44/74 (59.46%), Query Frame = 0
Query:   11 IQDGAPKGGFPKIQISRQLPSTRGPRGAVVL---GLVTVTMAVGYYKLGQANKGRRALRHEKRLARIALMPMLQ 81
            IQDG P GG+P I + R LP   GP G+ +L   GL+T+    G++ L ++ + RR L  EK   R+A+ P LQ
Sbjct:   24 IQDGPPPGGYPPIDVRRNLPKV-GPSGSTLLIGVGLITI---YGFWGLSRSAQRRRRLNQEKYQVRLAITPFLQ 93          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7982.18725.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FYS9_ECTSI1.470e-4281.72NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
I0YQ01_COCSC9.930e-1446.58NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A7J7IHL6_9RHOD8.690e-937.80NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
M1UR10_CYAM11.760e-839.44NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
F0YB35_AURAN1.270e-740.28NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
M2XA08_GALSU1.630e-641.89NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009346GRIM-19PFAMPF06212GRIM-19coord: 11..82
e-value: 4.1E-15
score: 55.9
IPR009346GRIM-19PANTHERPTHR12966NADH DEHYDROGENASE UBIQUINONE 1 ALPHA SUBCOMPLEX SUBUNIT 13coord: 7..81
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 56..92
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..36
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 37..55
NoneNo IPR availableTMHMMTMhelixcoord: 37..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7982contigM-pyrifera_M_contig7982:745..1290 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7982.18725.1mRNA_M-pyrifera_M_contig7982.18725.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig7982 745..1290 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig7982.18725.1 ID=prot_M-pyrifera_M_contig7982.18725.1|Name=mRNA_M-pyrifera_M_contig7982.18725.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=92bp
MATPVGAGPIIQDGAPKGGFPKIQISRQLPSTRGPRGAVVLGLVTVTMAV
GYYKLGQANKGRRALRHEKRLARIALMPMLQVSSRQCSLAVR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009346GRIM-19