prot_M-pyrifera_M_contig79810.18722.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig79810.18722.1
Unique Nameprot_M-pyrifera_M_contig79810.18722.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length78
Homology
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BLAST of mRNA_M-pyrifera_M_contig79810.18722.1 vs. uniprot
Match: A7NQ13_ROSCS (FHA domain containing protein n=2 Tax=Roseiflexus castenholzii TaxID=120962 RepID=A7NQ13_ROSCS)

HSP 1 Score: 57.8 bits (138), Expect = 6.380e-8
Identity = 27/71 (38.03%), Postives = 44/71 (61.97%), Query Frame = 0 
Query:    1 NKLFIEDIRLSRNHLMVTWSQAGWMAEDLNSYGGTMLTRTEVMHQPVELRAGDVLSLSDGIVTLTVAQAVH 71
            N + ++D ++SR+HL +TW+ A ++AED+ S GGT+L     +  P  LR GD L+L D ++ L +   V 
Sbjct:   70 NTILLDDPKISRHHLRLTWNGAAFVAEDVGSSGGTLLNGVS-LRAPTALRPGDTLTLGDTMLRLGIVSEVE 139
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79810.18722.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A7NQ13_ROSCS6.380e-838.03FHA domain containing protein n=2 Tax=Roseiflexus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000253Forkhead-associated (FHA) domainPFAMPF00498FHAcoord: 3..57
e-value: 2.4E-8
score: 34.2
NoneNo IPR availableGENE3D2.60.200.20coord: 1..73
e-value: 5.4E-11
score: 44.3
IPR008984SMAD/FHA domain superfamilySUPERFAMILY49879SMAD/FHA domaincoord: 3..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig79810contigM-pyrifera_M_contig79810:421..717 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig79810.18722.1mRNA_M-pyrifera_M_contig79810.18722.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig79810 421..717 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig79810.18722.1 ID=prot_M-pyrifera_M_contig79810.18722.1|Name=mRNA_M-pyrifera_M_contig79810.18722.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=78bp
NKLFIEDIRLSRNHLMVTWSQAGWMAEDLNSYGGTMLTRTEVMHQPVELR
AGDVLSLSDGIVTLTVAQAVHEQPKAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000253FHA_dom
IPR008984SMAD_FHA_dom_sf