prot_M-pyrifera_M_contig79751.18711.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig79751.18711.1
Unique Nameprot_M-pyrifera_M_contig79751.18711.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length45
Homology
BLAST of mRNA_M-pyrifera_M_contig79751.18711.1 vs. uniprot
Match: A0A7S4HLU2_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HLU2_9EUKA)

HSP 1 Score: 69.3 bits (168), Expect = 1.100e-12
Identity = 30/42 (71.43%), Postives = 34/42 (80.95%), Query Frame = 0
Query:    1 HYVTRQPFYLRQMIVPGTMEEFKRQGVRFNDLGIWSRAHSWS 42
            HYVTRQPFYLRQM  PG M EFK+QGVRFNDL I+ R H ++
Sbjct:  287 HYVTRQPFYLRQMCAPGVMNEFKKQGVRFNDLEIYKRDHRYN 328          
BLAST of mRNA_M-pyrifera_M_contig79751.18711.1 vs. uniprot
Match: UPI001E55C5B0 (fatty acid desaturase n=1 Tax=Aquabacterium sp. CECT 9606 TaxID=2845822 RepID=UPI001E55C5B0)

HSP 1 Score: 50.8 bits (120), Expect = 4.340e-6
Identity = 20/41 (48.78%), Postives = 28/41 (68.29%), Query Frame = 0
Query:    1 HYVTRQPFYLRQMIVPGTMEEFKRQGVRFNDLGIWSRAHSW 41
            H+V ++PFY+RQM  P      +  GVRFND+G +SRA+ W
Sbjct:  291 HFVVKEPFYVRQMTAPVAHRVMREVGVRFNDIGTFSRANRW 331          
BLAST of mRNA_M-pyrifera_M_contig79751.18711.1 vs. uniprot
Match: U6ZUL1_9PSED (Fatty acid desaturase n=11 Tax=Pseudomonas TaxID=286 RepID=U6ZUL1_9PSED)

HSP 1 Score: 47.8 bits (112), Expect = 5.350e-5
Identity = 19/45 (42.22%), Postives = 30/45 (66.67%), Query Frame = 0
Query:    1 HYVTRQPFYLRQMIVPGTMEEFKRQGVRFNDLGIWSRAHSWSGYE 45
            H+V ++PFY+RQM  P       + GVRFND+G ++RA+ ++  E
Sbjct:  291 HFVVKEPFYIRQMTAPVAHRVMAQMGVRFNDMGTFTRANRFAAKE 335          
BLAST of mRNA_M-pyrifera_M_contig79751.18711.1 vs. uniprot
Match: M5DUF4_9GAMM (FA_desaturase domain-containing protein n=7 Tax=root TaxID=1 RepID=M5DUF4_9GAMM)

HSP 1 Score: 47.8 bits (112), Expect = 5.360e-5
Identity = 18/39 (46.15%), Postives = 28/39 (71.79%), Query Frame = 0
Query:    1 HYVTRQPFYLRQMIVPGTMEEFKRQGVRFNDLGIWSRAH 39
            H+V R PFY+R +    + E  ++QG+RFND+G +SRA+
Sbjct:  317 HFVVRDPFYIRHLATKESHEVLRKQGIRFNDMGTFSRAN 355          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79751.18711.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A7S4HLU2_9EUKA1.100e-1271.43Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
UPI001E55C5B04.340e-648.78fatty acid desaturase n=1 Tax=Aquabacterium sp. CE... [more]
U6ZUL1_9PSED5.350e-542.22Fatty acid desaturase n=11 Tax=Pseudomonas TaxID=2... [more]
M5DUF4_9GAMM5.360e-546.15FA_desaturase domain-containing protein n=7 Tax=ro... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig79751contigM-pyrifera_M_contig79751:827..961 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig79751.18711.1mRNA_M-pyrifera_M_contig79751.18711.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig79751 827..961 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig79751.18711.1 ID=prot_M-pyrifera_M_contig79751.18711.1|Name=mRNA_M-pyrifera_M_contig79751.18711.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=45bp
HYVTRQPFYLRQMIVPGTMEEFKRQGVRFNDLGIWSRAHSWSGYE
back to top