prot_M-pyrifera_M_contig79705.18703.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig79705.18703.1
Unique Nameprot_M-pyrifera_M_contig79705.18703.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length255
Homology
BLAST of mRNA_M-pyrifera_M_contig79705.18703.1 vs. uniprot
Match: A9V916_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V916_MONBE)

HSP 1 Score: 174 bits (441), Expect = 1.560e-46
Identity = 106/278 (38.13%), Postives = 155/278 (55.76%), Query Frame = 0
Query:    1 GGHNHHNARVGLWIEGGRYENPGDDCSNFNSLVMNLEGVDVLTNTVTLR--APPIDPVGFETGDLDIIPGDLLDFWDRPNGKLLIRAKVASVST-------PPPLTNVTFSPSSPLPT--LPSTV---------EVFHFNRSATQLVIRNSAFINCRRIGILLHADRALISNNYFEGLGGGIVESWPDPDEGLCTTRCLIRNNIAIETNQLGRYAAPIWTTVFAVN---NSICHDDILVQNNTFLQGPGPFFRIHDASYVSFVANNITRCATDPSPVL 255
            GG NHH+ R+G WI  G +E+PGDD  + + LVM+++ V +   TV LR   P +     E G+L +  GD L F+D   G++L+RA + ++ T       P  L ++      P+PT  +P  +         +VF  +R+A +LV R +   N RR+G+L    +AL+ +N   GLGGG+VE +  P EGLC    L+RNN  + TNQL R AAPIW      N   +  CHD++ V+NNTF+ GPGP F +   + V+   N++ RC TD S  L
Sbjct:  410 GGGNHHSMRIGPWISDGLFESPGDDTCHVSGLVMSVDRV-INETTVALRPSVPDVFAAQVELGNLWLQVGDELSFYDHMTGRILLRAHIHALGTGGLVDGMPTTLAHL----DQPVPTGAVPGIIGGNFNATVTQVFDTSRTAERLVFRRNVLHNGRRVGLLAKGRQALVEHNTAVGLGGGLVELFNAPYEGLCAHSYLVRNNTCLYTNQLDRVAAPIWVERLPNNAQLDQFCHDNLTVENNTFVVGPGPIFLLDAIANVTLRDNHLVRCTTDHSAYL 682          
BLAST of mRNA_M-pyrifera_M_contig79705.18703.1 vs. uniprot
Match: A0A7V3T7Q6_9BACT (Right-handed parallel beta-helix repeat-containing protein n=1 Tax=Verrucomicrobia subdivision 3 bacterium TaxID=2052186 RepID=A0A7V3T7Q6_9BACT)

HSP 1 Score: 155 bits (392), Expect = 1.690e-39
Identity = 102/268 (38.06%), Postives = 132/268 (49.25%), Query Frame = 0
Query:    1 GGHNHHNARVGLWIEGGRYENPGDDCSNFNSLVMNLEGVDVLTNTVTLRAPPIDPVGFETGDLDIIPGDLLDFWDRPNGKLLIRAKVASVSTPPPLTNVTFS-------PSSP---------LPTLPSTVEVFHFNRSATQLVIRNSAFINCRRIGILLHADRALISNNYFEGLGGGIVESWPDPDEGLCTTRCLIRNNIAIETNQLGRYAAPIWTTVFAVNNSICHDDILVQNNTFLQGPGPFFRIHDASYVSFVANNITRCATDPS 252
            GGHNHHNAR+G WIEG  +EN GDD  + N+LVM +E              P D VG   G LDI PGD+L F++R  G+L+   KV +VS       VT         P  P         +P   S  +VF+ +R+  Q V RN+   N RR+G+L      LI NN FEGLGGG VE W  P EGL     ++R+N   +  QL R  A IW T+F   +   H ++L+  N     P P   +HD    + V NN    A   S
Sbjct:  528 GGHNHHNARLGPWIEGCTWENTGDDICHVNALVMGVEEKLAPDRIRLSLRNPYDVVGPSVG-LDIRPGDVLQFFNRAEGRLVSERKVVNVSKLEKSLEVTLDGDVGNIVPGRPGVKRAGLKKVPADDSITQVFNASRTCNQFVFRNNTVRNGRRVGVLAKGRGGLIENNTFEGLGGGAVELWNAPFEGLGAMDYVVRDNRISDCGQLAREHAAIWATMFKGGSDKLHRNLLITGNQITGFPNPAILLHDVQ-CAVVRNNCIVSAQQKS 793          
BLAST of mRNA_M-pyrifera_M_contig79705.18703.1 vs. uniprot
Match: A0A7C4QLZ2_9BACT (Beta_helix domain-containing protein n=1 Tax=Verrucomicrobia subdivision 3 bacterium TaxID=2052186 RepID=A0A7C4QLZ2_9BACT)

HSP 1 Score: 141 bits (356), Expect = 7.690e-35
Identity = 95/271 (35.06%), Postives = 126/271 (46.49%), Query Frame = 0
Query:    1 GGHNHHNARVGLWIEGGRYENPGDDCSNFNSLVMNLEGVDVLTNTVTLRAPPIDPVGFETGDLDIIPGDLLDFWDRPNGKLLIRAKVASVSTPPPLTNVTFS-PSSPLPT---LPS------------TVEVFHFNRSATQLVIRNSAFINCRRIGILLHADRALISNNYFEGLGGGIVESWPDPDEGLCTTRCLIRNNIAIETNQLGRYAAPIWTTVFAVNNSICHDDILVQNNTFLQGPGPFFRIHDASYVSFVANNITRCATDPSPVL 255
            GG+NHHNAR G WIEG  +EN GDD  + N   M         + V     P D  G E   LD   GD L F++   G+LL   +VA V+     T V    P   + T   LPS              ++F+ +R   Q V RN+   N RRIG+L   +  LI  N FE LGGG VE W  P EGL     ++R+N  +   +L R  A IW T+F       H ++L++ N     P P   +HDA+ V    N IT  +    PV+
Sbjct:  377 GGNNHHNARTGPWIEGCLFENCGDDVCHVNGYAMAAASQPAPDSLVINLHQPYDQFGREAR-LDFRDGDRLLFYEEKTGRLLAERRVAGVTPQEKTTQVRLDRPLDGIKTGKLLPSKQANYAVLDDTAVTQIFNASRMCNQFVFRNNVARNSRRIGVLAKGNGGLIEGNLFENLGGGGVEFWNAPFEGLAAENYVVRDNRILNCGRLARKHAAIWATMFKTGGDQLHRNLLIERNEIAGFPPPAILLHDATNVVLRGNRITVASEAFEPVV 646          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79705.18703.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A9V916_MONBE1.560e-4638.13Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
A0A7V3T7Q6_9BACT1.690e-3938.06Right-handed parallel beta-helix repeat-containing... [more]
A0A7C4QLZ2_9BACT7.690e-3535.06Beta_helix domain-containing protein n=1 Tax=Verru... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 11..253
e-value: 2.4E-10
score: 42.0
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 119..247

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig79705contigM-pyrifera_M_contig79705:17..781 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig79705.18703.1mRNA_M-pyrifera_M_contig79705.18703.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig79705 17..781 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig79705.18703.1 ID=prot_M-pyrifera_M_contig79705.18703.1|Name=mRNA_M-pyrifera_M_contig79705.18703.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=255bp
GGHNHHNARVGLWIEGGRYENPGDDCSNFNSLVMNLEGVDVLTNTVTLRA
PPIDPVGFETGDLDIIPGDLLDFWDRPNGKLLIRAKVASVSTPPPLTNVT
FSPSSPLPTLPSTVEVFHFNRSATQLVIRNSAFINCRRIGILLHADRALI
SNNYFEGLGGGIVESWPDPDEGLCTTRCLIRNNIAIETNQLGRYAAPIWT
TVFAVNNSICHDDILVQNNTFLQGPGPFFRIHDASYVSFVANNITRCATD
PSPVL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence