prot_M-pyrifera_M_contig7931.18622.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig7931.18622.1
Unique Nameprot_M-pyrifera_M_contig7931.18622.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length388
Homology
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BLAST of mRNA_M-pyrifera_M_contig7931.18622.1 vs. uniprot
Match: A0A6H5KM27_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM27_9PHAE)

HSP 1 Score: 253 bits (645), Expect = 1.600e-76
Identity = 136/210 (64.76%), Postives = 155/210 (73.81%), Query Frame = 0 
Query:   69 MVPAIMDVCPELFCPEHRGAGPEESSVLVGERSGVSFVVDGGXXXXXXXXXGADDPSATAFLRRAAGALRSAPSMATDVLRELLTCPASVLLSAGEEALKGMLPKIAGEYFPRQTTVASLCSSVWMRLYELHPNGQAMETWTLNALLQGDSEAALPRNVTYETMCREPVLIFRCRPEALSCPYLLRILLRVLRSLLLASERTIDQAVVAK 278
            M+PA+MDVCPELFCPE RG   + +    G+    + VV+               P   AF+RRA GA+ +AP  A DVLR LL CP   LLS  E+ LKG+LPKIAG  FPR+++VASLC  VWMRLY+ HP+GQAMETWTLNALLQ D+EA LPR VTYE MCREPVL+FRCR EALSCPYLLRILLRVLRSLLLASERTIDQAVVAK
Sbjct:    1 MLPAVMDVCPELFCPEQRGDSCDGNDY--GDVVDATAVVEPPSGKFASGQEITPHPLDKAFVRRATGAVVAAPGGAVDVLRALLACPVPALLSTAEDVLKGVLPKIAGPDFPRRSSVASLCCDVWMRLYDAHPHGQAMETWTLNALLQTDAEAPLPRAVTYEIMCREPVLVFRCRGEALSCPYLLRILLRVLRSLLLASERTIDQAVVAK 208
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BLAST of mRNA_M-pyrifera_M_contig7931.18622.1 vs. uniprot
Match: D7FZF5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZF5_ECTSI)

HSP 1 Score: 236 bits (602), Expect = 2.290e-69
Identity = 131/258 (50.78%), Postives = 156/258 (60.47%), Query Frame = 0 
Query:   40 MLRFTAEAVW-------GRGRGGSCRDQGLASLHAFMVPAIMDVCPELFCPEHRGAGPEESSVLVGERSGVSFVVDGGXXXXXXXXXGADDPSATAFLRRAAGALRSAPSMATDVLRELLTCPASVLLSAGEEALKGMLPKIAGEYFPRQTTVASLCSSVWMRLYELHPNGQAMETWTLNALLQGDSEAALPRNVTYETMCREPVLIFRCRPEALSCPYLLRILLRVLRSLLLASERTIDQAVVAKERRWEMVSVSNR 290
            M+R TA   W       G      CRD+GLASLHAFM+PA+MDVCPELFCPE RG   +++    G+    + VV+               P   AF+RRA GA+ +AP  A DVLR LL CP   LLS  E+ LKG+LPK+AG  FPR+++VASLC +VWMRLY+ HP+GQAMETWTLNALLQ D+EA LPR VTYETMCREPVL+FRCR EA                            V+AK  RWEMV  S R
Sbjct:    1 MIRLTAREAWAERAVDGGXXXXXXCRDEGLASLHAFMLPAVMDVCPELFCPEQRGNSCDDNHY--GDAVDGTAVVEAPSGSFVSGQEITPHPLDKAFVRRATGAVVAAPGGAVDVLRALLACPVPALLSTAEDVLKGVLPKVAGPDFPRRSSVASLCCNVWMRLYDAHPHGQAMETWTLNALLQTDAEAPLPRAVTYETMCREPVLVFRCRGEA----------------------------VLAKNSRWEMVCASAR 228
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BLAST of mRNA_M-pyrifera_M_contig7931.18622.1 vs. uniprot
Match: D7FZF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZF6_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 3.700e-6
Identity = 25/29 (86.21%), Postives = 27/29 (93.10%), Query Frame = 0 
Query:    1 MPALLATCFALYHSHCISQRRSPFPGPYR 29
            MPALLATCFALYH+HCIS RRSPFP P+R
Sbjct: 1134 MPALLATCFALYHTHCISLRRSPFPAPFR 1162
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7931.18622.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KM27_9PHAE1.600e-7664.76Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7FZF5_ECTSI2.290e-6950.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FZF6_ECTSI3.700e-686.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029321Integrator complex subunit 2PFAMPF14750INTS2coord: 129..295
e-value: 1.7E-15
score: 55.8
IPR029321Integrator complex subunit 2PANTHERPTHR28608FAMILY NOT NAMEDcoord: 128..292
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..387
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7931contigM-pyrifera_M_contig7931:201..11826 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7931.18622.1mRNA_M-pyrifera_M_contig7931.18622.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig7931 177..11826 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig7931.18622.1 ID=prot_M-pyrifera_M_contig7931.18622.1|Name=mRNA_M-pyrifera_M_contig7931.18622.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=388bp
MPALLATCFALYHSHCISQRRSPFPGPYRYELRELPLSRMLRFTAEAVWG
RGRGGSCRDQGLASLHAFMVPAIMDVCPELFCPEHRGAGPEESSVLVGER
SGVSFVVDGGAAGGGGGGTGADDPSATAFLRRAAGALRSAPSMATDVLRE
LLTCPASVLLSAGEEALKGMLPKIAGEYFPRQTTVASLCSSVWMRLYELH
PNGQAMETWTLNALLQGDSEAALPRNVTYETMCREPVLIFRCRPEALSCP
YLLRILLRVLRSLLLASERTIDQAVVAKERRWEMVSVSNRRKKEKAVIEA
AIAGSVAAASAGSGGGIQVWEDYEEESSRVDGCMMLLIQQAIVARCLLVV
ALGGAGHSNSGGGGGGGGGGGEVFGGGIASRTQASVK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029321INTS2