prot_M-pyrifera_M_contig7893.18546.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig7893.18546.1
Unique Nameprot_M-pyrifera_M_contig7893.18546.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length256
Homology
BLAST of mRNA_M-pyrifera_M_contig7893.18546.1 vs. uniprot
Match: A0A6H5KHM1_9PHAE (HAMP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KHM1_9PHAE)

HSP 1 Score: 206 bits (523), Expect = 9.220e-59
Identity = 131/270 (48.52%), Postives = 175/270 (64.81%), Query Frame = 0
Query:    1 YDPRVRPWYKLAVDATGISDETGLGDVAITAPYTDAVDS--NWMVTIARAVY---DSTSSQVLGVVGVDVLLEAAQRLVEELFFLQSGFSILATAEEGVVLAAPSRVWNRVEAVKSTTVCAAVNGMCSGRE---WKDLL----SGEVVKFSSTSFSDDGKQIEAMLIAAPVRPTFN--LETGDTVLTHYIISAVTHDEVFAEAERMSTDIQRSTENILALTLSIAAATVIAVGVAVFVLSGTMTNSITKMSSAARSISRDGAKTDVFGSV 256
            YDP  R WY+LA DA  +  ET LG   +T PYTDAV S  +W+VT+ARAVY    +TS  +LGVVGVD+ LE  Q  VE + FL++G+SILATA+EGVVLAA +  W+R  A   T VC   NG+CSG E   W+DLL    +G +  F + S +          IAAP+  TF   +  G+  +THYI+SAV  DE+F   + M+  I+ ST  I+  T  +A +T++AV ++V+ L+G++T  I KM+SAARSIS+DGAKTDVFGSV
Sbjct:  243 YDPTERDWYELA-DAAVMDSETFLGGAIVTPPYTDAVGSENDWLVTLARAVYRNSGTTSGSLLGVVGVDMRLEQVQESVEGINFLETGYSILATADEGVVLAAGA-AWDRDTAENITKVCDLGNGICSGDEGDSWEDLLLETKNGGIKTFKAVSTTGXXXXXXXXXIAAPITTTFGTAVSGGEGKVTHYILSAVPRDEIFQPVDGMADLIRESTTEIMVTTAIVACSTLVAVALSVYFLAGSITRPIVKMTSAARSISKDGAKTDVFGSV 510          
BLAST of mRNA_M-pyrifera_M_contig7893.18546.1 vs. uniprot
Match: D8LT17_ECTSI (Methyl-accepting chemotaxis protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT17_ECTSI)

HSP 1 Score: 195 bits (495), Expect = 9.600e-55
Identity = 127/268 (47.39%), Postives = 172/268 (64.18%), Query Frame = 0
Query:    1 YDPRVRPWYKLAVDATGISDETGLGDVAITAPYTDAVDSNWMVTIARAVYD---STSSQVLGVVGVDVLLEAAQRLVEELFFLQSGFSILATAEEGVVLAAPSRVWNRVEAVKSTTVCAAVNGMCSGR---EWKDLLS----GEVVKFSSTSFSDDGKQIEAMLIAAPVRPTFNLET--GDTVLTHYIISAVTHDEVFAEAERMSTDIQRSTENILALTLSIAAATVIAVGVAVFVLSGTMTNSITKMSSAARSISRDGAKTDVFGSV 256
            +DP VRPWY+ A DA  +   T LG   I+ PY DA+D  W++++ARAVY    ST   +LGVVG+DV LE  Q  VE + FL +G+SILATA+ G+VLAA   VW++    ++ TVCA  NG+CSG    EW DLL+    G +  F+STS +  G   E +L+AAPV   F   T  G   +THYI+SAV  +E+F     M+  I+ ST  I+  T  +A  T++AV ++V+ L+G++T  I KM+SAARSI+ DGAKTDVFGSV
Sbjct:  242 FDPTVRPWYQGAEDAA-VDSGTSLGAAIISDPYKDAIDDEWLLSLARAVYSDSGSTRGNLLGVVGMDVRLEQVQESVEGINFLNTGYSILATAD-GIVLAAG--VWDKDATEEAPTVCAIGNGICSGSDGDEWVDLLAEIENGGIKSFTSTSTA--GVDEEWILVAAPVEGNFATATSGGAGTVTHYILSAVPRNEIFEPVVGMADSIRDSTVQIIVTTAIVACFTLVAVALSVYFLAGSITRPIVKMTSAARSIAADGAKTDVFGSV 503          
BLAST of mRNA_M-pyrifera_M_contig7893.18546.1 vs. uniprot
Match: D8LT16_ECTSI (HAMP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT16_ECTSI)

HSP 1 Score: 192 bits (487), Expect = 1.200e-53
Identity = 126/268 (47.01%), Postives = 169/268 (63.06%), Query Frame = 0
Query:    1 YDPRVRPWYKLAVDATGISDETGLGDVAITAPYTDAVDSNWMVTIARAVYDS---TSSQVLGVVGVDVLLEAAQRLVEELFFLQSGFSILATAEEGVVLAAPSRVWNRVEAVKSTTVCAAVNGMCSGRE---WKDLLS----GEVVKFSSTSFSDDGKQIEAMLIAAPVRPTFN--LETGDTVLTHYIISAVTHDEVFAEAERMSTDIQRSTENILALTLSIAAATVIAVGVAVFVLSGTMTNSITKMSSAARSISRDGAKTDVFGSV 256
            +DP VRPWY+ A D      ET LG   IT P+  A+D +W+V +ARAVY +   TS  +LGVVG+DV LE  Q  VE + FL +G+SILATA+EGVVLAA   VW+   + ++ TVC    G+CSGR+   W DL++    GEV  F  TS S DG   E +L+AAPV  TF+  +  G   +THYI+SAV  +E+F     M   I  ST  I+  T  +A  T++AV ++V+ L+G++   I KM+ AARSI+ DGA+TDVFGSV
Sbjct:  242 FDPTVRPWYETAEDED-YDSETFLGPAIITDPFKGAIDDDWLVALARAVYSNSGTTSGSLLGVVGMDVRLEEVQESVEAINFLDTGYSILATADEGVVLAAG--VWDEDASEEAPTVCDLGIGICSGRDGDGWTDLIADTENGEVKSF--TSKSTDGVDEEWILVAAPVEGTFDTAISGGAGTVTHYILSAVPRNEIFETVVGMVDVIWDSTIQIIIPTAIVACCTLVAVALSVYFLAGSIVRPIVKMTKAARSITADGAETDVFGSV 504          
BLAST of mRNA_M-pyrifera_M_contig7893.18546.1 vs. uniprot
Match: A0A6H5JHX1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHX1_9PHAE)

HSP 1 Score: 147 bits (372), Expect = 7.820e-38
Identity = 114/284 (40.14%), Postives = 159/284 (55.99%), Query Frame = 0
Query:    1 YDPRVRPW---YKLAVDATGISDETGLGDVAITAPYTDAVDSNWMVTIARAVYDSTSSQVLGVVGVDVLLEAAQRLVEELFFLQSGFSILATAEEGVVLAAPSRVWNRVEAVKSTTVCAAVNGMCSGRE---WKDLLS----GEVVKFSSTSFSDDGKQIEAMLIAAPVRPTFN--LETGDTVLTHYIISAVTHDEVFAEAERM-----STDIQRSTENILAL-----------TLSIAAATVIAVGVAVFVLSGTMTNSITKMSSAARSISRDGAKTDVFGSV 256
            +DP V PW   Y+ A D      ET L    IT P+  ++D +W+V +ARAVY      +LGVVG+DV L   Q  VE + FL +G+SILATA+EGVVLAA    W+   + ++ TVC    G+ SGR+   W DL +    GEV  F+S   S      E +L+AAPV  TF+  +  G   + HYI+SAV  +E+F     M      + IQ    ++L+L           T  +A  T++AV +AV+ L+G++T  I KM+ AARS + DGA+ DVFGSV
Sbjct:   94 FDPTVPPWERWYETAEDPD-YDSETFLAPAIITDPFKGSIDDDWLVALARAVYS-----LLGVVGMDVRLGQLQESVEAINFLDTGYSILATADEGVVLAAAE--WDEDASQEALTVCDLRIGISSGRDGDGWTDLKADTENGEVKSFTS---SPPTASTEWILVAAPVEGTFDTAISGGAGTVAHYILSAVPRNEIFEPVVGMMGLIWDSTIQEFHVHLLSLFSSLHVQIIIPTAIVACCTLVAVALAVYFLAGSITRPIVKMTKAARSTTADGAEHDVFGSV 366          
BLAST of mRNA_M-pyrifera_M_contig7893.18546.1 vs. uniprot
Match: A0A6H5KHM8_9PHAE (HAMP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHM8_9PHAE)

HSP 1 Score: 142 bits (358), Expect = 3.160e-35
Identity = 117/290 (40.34%), Postives = 161/290 (55.52%), Query Frame = 0
Query:    1 YDPRVRPWY--------------KLAVDATGISDETGLGDVAITAP----------YTDAV--DSNWMVTIARAVYDSTSSQ--VLGVVGVDVLLEAAQRLVEELFFLQSGFSILATAEEGVVLAAPSRVWNRVEAVKSTTVCAAVNGMCSGREWKDLLS----GEVVKFSSTSFSDDGKQIEAMLIAAPVRPTFNLET--GDTVLTHYIISAVTHDEVFAEAERMSTDIQRSTENILALTLSIAAATVIAVGVAVFVLSGTMTNSITKMSSAARSISRDGAKTDVFGSV 256
            +DP VRPWY               LAVD  G++ +T L      AP          YT A   +  +   + +   DS S++  +LGVVG+DV LE  Q  VE + FL +G+SILATA+ G+VLAA   VW+R    K+        G   G EW DLL+    G + +F+STS +  G   E +L+AAPV   F   T  G   +THYI+SAV  +E+F     M+  I+ ST  I+  T  +A  T++AV ++V+ L+G++T  I KM+SAARSI+ DGAKTDVFGSV
Sbjct:  225 FDPTVRPWYAVESGLKGPKAIYANLAVDG-GVNKKTALTAPRRIAPINCENFEKPVYTQASSKEQGFEADVHKFSNDSDSTRGNLLGVVGMDVRLEQVQESVEGINFLNTGYSILATAD-GIVLAAG--VWDRDGTEKAPEGKGRTLGDSDGDEWVDLLAEIENGGIKRFTSTSTA--GVDEEWILVAAPVEGNFATATSGGAGTVTHYILSAVPRNEIFEPVVGMADLIRDSTVQIIVTTAIVACFTMVAVALSVYFLAGSITRPIVKMTSAARSIAADGAKTDVFGSV 508          
BLAST of mRNA_M-pyrifera_M_contig7893.18546.1 vs. uniprot
Match: A0A138ZYR3_GONPJ (Cache domain-containing protein n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A138ZYR3_GONPJ)

HSP 1 Score: 65.1 bits (157), Expect = 1.660e-8
Identity = 66/260 (25.38%), Postives = 110/260 (42.31%), Query Frame = 0
Query:    1 YDPRVRPWYKLAVDATGISDETGLGDVAITAPYTDAVDSNWMVTIARAVYDSTSSQVLGVVGVDVLLEAAQRLVEELFFLQSGFSILATAEEGVVLAAPSRVWNRVEAVKSTTVCAAVNGMCSGREWKDLLSGEVVKFSSTSFSDDGKQIEAMLIAAPVRPTFNLETGDTVLTHYIISAVTHDEVFAEAERMSTDIQRSTENILA----LTLSIAAATVIAVGVAVFVLSGTMTNSITKMSSAARSISRDGAKTDVFGSV 256
            YDPRVRPWYK A                +T PY DA    W +T++  + +++S  ++GV GVDV+++  +  +E         S+  T   GV L+ PS       A    T   A N   +   W  + S      SS  + D       ++    V    N+  G    ++  +SA     V    +    ++Q    NILA    +++ I  A +I V  +V +L+ +    + ++S  +  ISR+  + D+F  V
Sbjct:   43 YDPRVRPWYKDA-------QANPTSAYVVTDPYRDAFGQGWEITVSSLIRNTSSGAIIGVAGVDVVIDTLKATLESQAAKGGSMSLYQT--NGVALSNPSWNLKTWTADVPFTYRNATNPTINADLWDRMRSASSGVASSEVYKDPSSGDNYLV----VYKVLNITNGKLSPSYVSVSAFPMALVNIPVQ----NVQARMNNILATYSGISVGIFLAVLIIVSTSVAILANSAAQPLVRLSHESEKISRNIGENDLFAGV 285          
BLAST of mRNA_M-pyrifera_M_contig7893.18546.1 vs. uniprot
Match: A0A5P9IJG2_9GAMM (Methyl-accepting chemotaxis protein II n=1 Tax=Halomonas sp. THAF5a TaxID=2587844 RepID=A0A5P9IJG2_9GAMM)

HSP 1 Score: 63.5 bits (153), Expect = 7.310e-8
Identity = 39/99 (39.39%), Postives = 55/99 (55.56%), Query Frame = 0
Query:    1 YDPRVRPWYKLAVDATGISDETGLGDVAITAPYTDAVDSNWMVTIARAVYDSTSSQVLGVVGVDVLLEAAQRLVEELFFLQSGFSILATAEEGVVLAAP 99
            YDPRVRPWY+ AV+A         G+V +T PY DA     +VT A   Y     +++ V G DV L+A   +V+E+    S  + LATA+ G ++A P
Sbjct:  114 YDPRVRPWYRQAVEA---------GEVVVTTPYADATSDKRVVTFAAPYY--RQGELVAVAGGDVALDAIIAIVDEIMPTPSSLAFLATAD-GTLVAHP 200          
BLAST of mRNA_M-pyrifera_M_contig7893.18546.1 vs. uniprot
Match: A0A1N6Y257_9BACI (Methyl-accepting chemotaxis protein n=11 Tax=Bacteria TaxID=2 RepID=A0A1N6Y257_9BACI)

HSP 1 Score: 63.5 bits (153), Expect = 7.520e-8
Identity = 42/111 (37.84%), Postives = 58/111 (52.25%), Query Frame = 0
Query:    1 YDPRVRPWYKLAVDATGISDETGLGDVAITAPYTDAVDSNWMVTIARAVYDSTSSQVLGVVGVDVLLEAAQRLVEELFFLQSGFSILATAEEGVVLAAPSRVWN--RVEAV 109
            YDP  RPWYK AV++ G        +V  T PY DA     +VTIA+ + D  ++Q LGV+ +D+ L A   ++ E      G+  L    +GV LA P+   N  R EAV
Sbjct:  133 YDPTARPWYKQAVESPG--------EVIYTEPYEDASTGKTVVTIAKTIDDPKTNQRLGVIAMDLELNALNSMITEAEVNYGGYGFLFD-RQGVALAHPTETGNNLRQEAV 234          
BLAST of mRNA_M-pyrifera_M_contig7893.18546.1 vs. uniprot
Match: U2CSZ8_9FIRM (Methyl-accepting chemotaxis protein signaling domain protein n=2 Tax=Eubacteriales TaxID=186802 RepID=U2CSZ8_9FIRM)

HSP 1 Score: 62.0 bits (149), Expect = 2.450e-7
Identity = 35/86 (40.70%), Postives = 51/86 (59.30%), Query Frame = 0
Query:    1 YDPRVRPWYKLAVDATGISDETGLGDVAITAPYTDAVDSN-WMVTIARAVYDSTSSQVLGVVGVDVLLEAAQRLVEELFFLQSGFS 85
            YDP    WYKLA++  G         VAIT PY D++    + +T A+AV DS ++QV+GVVG+DV L    +LV ++    SG++
Sbjct:  128 YDPTKTNWYKLALEKDG--------QVAITQPYEDSIQKGVYEITFAKAVKDSKTNQVVGVVGIDVKLSTISKLVSQVKLGDSGYA 205          
BLAST of mRNA_M-pyrifera_M_contig7893.18546.1 vs. uniprot
Match: A0A7C2HUS5_9THEO (Cache domain-containing protein (Fragment) n=1 Tax=Ammonifex degensii TaxID=42838 RepID=A0A7C2HUS5_9THEO)

HSP 1 Score: 60.5 bits (145), Expect = 3.530e-7
Identity = 37/101 (36.63%), Postives = 56/101 (55.45%), Query Frame = 0
Query:    1 YDPRVRPWYKLAVDATGISDETGLGDVAITAPYTDAVDSNWMVTIARAVYDSTSSQVLGVVGVDVLLEAAQRLVEELFFLQSGFSILATAEEGVVLAAPSR 101
            +DPR RPWY+ AV+  G +         +T PY DA      +T+A  VY      ++GV+G+DV L+ AQ+LV+ L F + GF ++   E G +L  P +
Sbjct:  130 FDPRKRPWYRQAVNRQGFT---------VTEPYVDAATGKPCLTLAIPVYQE--KVLMGVLGLDVSLDTAQKLVQNLNFWRKGFFVVID-EGGHILIHPEK 218          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7893.18546.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KHM1_9PHAE9.220e-5948.52HAMP domain-containing protein n=2 Tax=Ectocarpus ... [more]
D8LT17_ECTSI9.600e-5547.39Methyl-accepting chemotaxis protein n=1 Tax=Ectoca... [more]
D8LT16_ECTSI1.200e-5347.01HAMP domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JHX1_9PHAE7.820e-3840.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KHM8_9PHAE3.160e-3540.34HAMP domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A138ZYR3_GONPJ1.660e-825.38Cache domain-containing protein n=1 Tax=Gonapodya ... [more]
A0A5P9IJG2_9GAMM7.310e-839.39Methyl-accepting chemotaxis protein II n=1 Tax=Hal... [more]
A0A1N6Y257_9BACI7.520e-837.84Methyl-accepting chemotaxis protein n=11 Tax=Bacte... [more]
U2CSZ8_9FIRM2.450e-740.70Methyl-accepting chemotaxis protein signaling doma... [more]
A0A7C2HUS5_9THEO3.530e-736.63Cache domain-containing protein (Fragment) n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.450.20coord: 1..65
e-value: 2.1E-15
score: 58.6
NoneNo IPR availablePANTHERPTHR32089FAMILY NOT NAMEDcoord: 1..105
NoneNo IPR availablePANTHERPTHR32089:SF103coord: 1..105
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..202
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 227..256
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 203..226
NoneNo IPR availableTMHMMTMhelixcoord: 203..225
IPR033479Double Cache domain 1PFAMPF02743dCache_1coord: 2..123
e-value: 8.2E-14
score: 52.0
IPR029151Periplasmic sensor-like domain superfamilySUPERFAMILY103190Sensory domain-likecoord: 1..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7893contigM-pyrifera_M_contig7893:2891..3658 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7893.18546.1mRNA_M-pyrifera_M_contig7893.18546.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig7893 2891..3658 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig7893.18546.1 ID=prot_M-pyrifera_M_contig7893.18546.1|Name=mRNA_M-pyrifera_M_contig7893.18546.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=256bp
YDPRVRPWYKLAVDATGISDETGLGDVAITAPYTDAVDSNWMVTIARAVY
DSTSSQVLGVVGVDVLLEAAQRLVEELFFLQSGFSILATAEEGVVLAAPS
RVWNRVEAVKSTTVCAAVNGMCSGREWKDLLSGEVVKFSSTSFSDDGKQI
EAMLIAAPVRPTFNLETGDTVLTHYIISAVTHDEVFAEAERMSTDIQRST
ENILALTLSIAAATVIAVGVAVFVLSGTMTNSITKMSSAARSISRDGAKT
DVFGSV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033479dCache_1
IPR029151Sensor-like_sf