prot_M-pyrifera_M_contig78539.18454.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig78539.18454.1
Unique Nameprot_M-pyrifera_M_contig78539.18454.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length147
Homology
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BLAST of mRNA_M-pyrifera_M_contig78539.18454.1 vs. uniprot
Match: A0A553AJ84_9FLAO (Gliding motility-associated C-terminal domain-containing protein n=1 Tax=Flavobacterium sp. GT3R68 TaxID=2594437 RepID=A0A553AJ84_9FLAO)

HSP 1 Score: 53.1 bits (126), Expect = 2.830e-5
Identity = 42/123 (34.15%), Postives = 59/123 (47.97%), Query Frame = 0 
Query:   10 AANDLCSDAIQIAASGGVVMGNTGYASNATLLTSSCNGVRLNTIGGVWYTITPAAGTKVLATTCENSFFDTELALLYGGCNEQTCVTADDNACSSYESLSINAEDSALAWTADGSEYLLYVTG 132
            A NDLCS AI IA  GG     T  A+     T +C        GG+WY+     G  V  + C  S +DT++ ++ G C   TCVT +D+ CS+   ++IN+          G  Y +YV G
Sbjct:  520 ATNDLCSGAIPIAC-GGTATQTTVGATTTGAPTGTCG--TTGGSGGLWYSYV-GTGDVVTFSLC-GSAYDTKIQVVTGACGTFTCVTGNDDFCSTQSQVTINS--------VLGINYYVYVFG 629
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig78539.18454.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A553AJ84_9FLAO2.830e-534.15Gliding motility-associated C-terminal domain-cont... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig78539contigM-pyrifera_M_contig78539:273..713 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig78539.18454.1mRNA_M-pyrifera_M_contig78539.18454.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig78539 273..713 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig78539.18454.1 ID=prot_M-pyrifera_M_contig78539.18454.1|Name=mRNA_M-pyrifera_M_contig78539.18454.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=147bp
LTDCEAGTEAANDLCSDAIQIAASGGVVMGNTGYASNATLLTSSCNGVRL
NTIGGVWYTITPAAGTKVLATTCENSFFDTELALLYGGCNEQTCVTADDN
ACSSYESLSINAEDSALAWTADGSEYLLYVTGKQYSAGNFQLTVVIS
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