prot_M-pyrifera_M_contig77796.18301.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig77796.18301.1
Unique Nameprot_M-pyrifera_M_contig77796.18301.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length60
Homology
BLAST of mRNA_M-pyrifera_M_contig77796.18301.1 vs. uniprot
Match: UPI00190A5CD4 (RICIN domain-containing protein n=1 Tax=Streptomyces sp. MBT65 TaxID=1488395 RepID=UPI00190A5CD4)

HSP 1 Score: 51.2 bits (121), Expect = 6.120e-6
Identity = 23/51 (45.10%), Postives = 31/51 (60.78%), Query Frame = 0
Query:    3 NMCLDIEGGGAFAGVPVVLKECNGTNTQKWTMDAQTGLIQSQANTSLCLDA 53
            N CLDI  G    G  VV   C  ++TQ W +DA  G++QS A++ LCLD+
Sbjct:  378 NRCLDIRDGDLTEGTDVVTAPCTSSDTQLWRVDAARGVVQSSADSDLCLDS 428          
BLAST of mRNA_M-pyrifera_M_contig77796.18301.1 vs. uniprot
Match: A0A7G1NW64_9ACTN (Hydrolase n=2 Tax=Streptomyces aurantiacus group TaxID=2838335 RepID=A0A7G1NW64_9ACTN)

HSP 1 Score: 50.8 bits (120), Expect = 8.400e-6
Identity = 25/51 (49.02%), Postives = 34/51 (66.67%), Query Frame = 0
Query:    3 NMCLDIEGGGAFAGVPVVLKECNGTNTQKWTMDAQTGLIQSQANTSLCLDA 53
            ++CLDI+GG A AGV   L  C+   TQKWT +   GL++S A+  LCLD+
Sbjct:  398 DLCLDIKGGTAKAGVGAELDTCSAAGTQKWTYEKD-GLLRSAADPGLCLDS 447          
BLAST of mRNA_M-pyrifera_M_contig77796.18301.1 vs. uniprot
Match: A0A6B3BYU7_9ACTN (Ricin-type beta-trefoil lectin domain protein n=2 Tax=unclassified Streptomyces TaxID=2593676 RepID=A0A6B3BYU7_9ACTN)

HSP 1 Score: 50.4 bits (119), Expect = 1.150e-5
Identity = 25/50 (50.00%), Postives = 33/50 (66.00%), Query Frame = 0
Query:    5 CLDIEGGGAFAGVPVVLKECNGTN-TQKWTMDAQTGLIQSQANTSLCLDA 53
            CLDI GG    G  VV   C+ +  TQ+W +DA +GL++S ANT LCLD+
Sbjct:  418 CLDIRGGELEKGTDVVTATCSASAATQRWQVDAGSGLLRSSANTDLCLDS 467          
BLAST of mRNA_M-pyrifera_M_contig77796.18301.1 vs. uniprot
Match: UPI001AD62C77 (ricin-type beta-trefoil lectin domain protein n=2 Tax=Streptomyces TaxID=1883 RepID=UPI001AD62C77)

HSP 1 Score: 49.7 bits (117), Expect = 2.140e-5
Identity = 22/49 (44.90%), Postives = 31/49 (63.27%), Query Frame = 0
Query:    5 CLDIEGGGAFAGVPVVLKECNGTNTQKWTMDAQTGLIQSQANTSLCLDA 53
            CLDI  G    G  VV   C+G+ TQ+W +D   G++QS A++ LCLD+
Sbjct:  391 CLDILDGDLSNGTDVVTAPCSGSTTQRWRVDTARGVVQSYADSGLCLDS 439          
BLAST of mRNA_M-pyrifera_M_contig77796.18301.1 vs. uniprot
Match: UPI0005BD9EC2 (RICIN domain-containing protein n=1 Tax=Streptomyces xylophagus TaxID=285514 RepID=UPI0005BD9EC2)

HSP 1 Score: 49.3 bits (116), Expect = 2.930e-5
Identity = 21/49 (42.86%), Postives = 31/49 (63.27%), Query Frame = 0
Query:    5 CLDIEGGGAFAGVPVVLKECNGTNTQKWTMDAQTGLIQSQANTSLCLDA 53
            CLDI  G    G  V+   C+ +NTQ W +D+  G++QS A++ LCLD+
Sbjct:  381 CLDIRDGDLTEGTDVITAACSSSNTQLWRVDSARGVVQSGADSDLCLDS 429          
BLAST of mRNA_M-pyrifera_M_contig77796.18301.1 vs. uniprot
Match: A0A250VIJ2_STROL (Hydrolase n=15 Tax=Actinomycetia TaxID=1760 RepID=A0A250VIJ2_STROL)

HSP 1 Score: 48.9 bits (115), Expect = 4.010e-5
Identity = 21/52 (40.38%), Postives = 31/52 (59.62%), Query Frame = 0
Query:    2 NNMCLDIEGGGAFAGVPVVLKECNGTNTQKWTMDAQTGLIQSQANTSLCLDA 53
            + +CLDI  G    G  VV   C    TQ+W +D+  G++QS A++ LCLD+
Sbjct:  384 SGLCLDIRDGDLTQGTDVVTAPCTSARTQRWRVDSGRGVLQSYADSDLCLDS 435          
BLAST of mRNA_M-pyrifera_M_contig77796.18301.1 vs. uniprot
Match: A0A1H5D535_9ACTN (Ricin-type beta-trefoil lectin domain-containing protein n=4 Tax=Streptomyces TaxID=1883 RepID=A0A1H5D535_9ACTN)

HSP 1 Score: 48.5 bits (114), Expect = 5.490e-5
Identity = 20/49 (40.82%), Postives = 29/49 (59.18%), Query Frame = 0
Query:    5 CLDIEGGGAFAGVPVVLKECNGTNTQKWTMDAQTGLIQSQANTSLCLDA 53
            CLD+  G    G  V+   C  + TQ W +DA  G++QS A++ LCLD+
Sbjct:  395 CLDVRDGDLTEGTDVITASCTSSGTQLWRVDATRGVVQSSADSDLCLDS 443          
BLAST of mRNA_M-pyrifera_M_contig77796.18301.1 vs. uniprot
Match: UPI00124AF52A (ricin-type beta-trefoil lectin domain protein n=1 Tax=Streptomyces albicerus TaxID=2569859 RepID=UPI00124AF52A)

HSP 1 Score: 48.5 bits (114), Expect = 5.520e-5
Identity = 23/51 (45.10%), Postives = 35/51 (68.63%), Query Frame = 0
Query:    3 NMCLDIEGGGAFAGVPVVLKECNGTNTQKWTMDAQTGLIQSQANTSLCLDA 53
            ++CLDI+GG A AGV   L+ C+   TQ+W+ + + GL++S  N  LCLD+
Sbjct:  403 DLCLDIKGGTAKAGVGTKLETCSAAGTQRWSYE-EDGLLRSVDNPELCLDS 452          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig77796.18301.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
UPI00190A5CD46.120e-645.10RICIN domain-containing protein n=1 Tax=Streptomyc... [more]
A0A7G1NW64_9ACTN8.400e-649.02Hydrolase n=2 Tax=Streptomyces aurantiacus group T... [more]
A0A6B3BYU7_9ACTN1.150e-550.00Ricin-type beta-trefoil lectin domain protein n=2 ... [more]
UPI001AD62C772.140e-544.90ricin-type beta-trefoil lectin domain protein n=2 ... [more]
UPI0005BD9EC22.930e-542.86RICIN domain-containing protein n=1 Tax=Streptomyc... [more]
A0A250VIJ2_STROL4.010e-540.38Hydrolase n=15 Tax=Actinomycetia TaxID=1760 RepID=... [more]
A0A1H5D535_9ACTN5.490e-540.82Ricin-type beta-trefoil lectin domain-containing p... [more]
UPI00124AF52A5.520e-545.10ricin-type beta-trefoil lectin domain protein n=1 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000772Ricin B, lectin domainPFAMPF00652Ricin_B_lectincoord: 2..56
e-value: 1.3E-11
score: 44.8
IPR000772Ricin B, lectin domainPROSITEPS50231RICIN_B_LECTINcoord: 1..60
score: 16.206
NoneNo IPR availableGENE3D2.80.10.50coord: 1..60
e-value: 3.6E-13
score: 51.4
IPR035992Ricin B-like lectinsSUPERFAMILY50370Ricin B-like lectinscoord: 2..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig77796contigM-pyrifera_M_contig77796:727..906 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig77796.18301.1mRNA_M-pyrifera_M_contig77796.18301.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig77796 727..921 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig77796.18301.1 ID=prot_M-pyrifera_M_contig77796.18301.1|Name=mRNA_M-pyrifera_M_contig77796.18301.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=60bp
MNNMCLDIEGGGAFAGVPVVLKECNGTNTQKWTMDAQTGLIQSQANTSLC
LDAGSTGGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000772Ricin_B_lectin
IPR035992Ricin_B-like_lectins