prot_M-pyrifera_M_contig77785.18294.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig77785.18294.1
Unique Nameprot_M-pyrifera_M_contig77785.18294.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length219
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig77785.18294.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009457Domain of unknown function DUF1084PFAMPF06454DUF1084coord: 1..218
e-value: 4.2E-12
score: 46.0
IPR040226THH1/TOM1/TOM3PANTHERPTHR31142FAMILY NOT NAMEDcoord: 1..217
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 51..69
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 96..115
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 31..50
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 167..191
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 217..219
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 147..166
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 116..135
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 136..146
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 192..216
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 70..95
NoneNo IPR availableTMHMMTMhelixcoord: 70..92
NoneNo IPR availableTMHMMTMhelixcoord: 2..21
NoneNo IPR availableTMHMMTMhelixcoord: 145..167
NoneNo IPR availableTMHMMTMhelixcoord: 113..135
NoneNo IPR availableTMHMMTMhelixcoord: 188..210

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig77785contigM-pyrifera_M_contig77785:85..741 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig77785.18294.1mRNA_M-pyrifera_M_contig77785.18294.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig77785 85..741 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig77785.18294.1 ID=prot_M-pyrifera_M_contig77785.18294.1|Name=mRNA_M-pyrifera_M_contig77785.18294.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=219bp
LGVVYSVCSVVAVLLLVRAHVRSPPWTAPKLILGCCAGALAGRAAFLFSA
DRWDGLSWAVHPAALDPGDAIVHGLGEVPGLLLLGACVLVLVRWVDAFGG
YTAQGAARVRRMYRPVVLFGGIAIAIAQIAIWSAYAVSSALEAAEWAFAA
AILQAIAFLLVASALVEMGRRLRRKTRDAPVNPRLRRAATRVVGVTSASC
AILLALRAFITALAAFENR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009457DUF1084
IPR040226THH1/TOM1/TOM3