prot_M-pyrifera_M_contig77525.18247.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig77525.18247.1
Unique Nameprot_M-pyrifera_M_contig77525.18247.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length130
Homology
BLAST of mRNA_M-pyrifera_M_contig77525.18247.1 vs. uniprot
Match: A0A7K1Z8Z6_9ACTN (Cupin domain-containing protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1Z8Z6_9ACTN)

HSP 1 Score: 187 bits (476), Expect = 4.130e-59
Identity = 90/124 (72.58%), Postives = 101/124 (81.45%), Query Frame = 0
Query:    3 ESGPIFRHLSKLDWETKADQKAEVAALAAQADDVGARRSRLTTGEFGFHSHISEMPPGFEVPPHTHNISEHMTILEGSINVSDGTVLETGDTVVIPGGHLYGFTVGDAGVRFLVVRGADAATDF 126
            E GPIFRHL +L WET ADQKAEVAALAAQAD +GARRSRLT GE GFHSHISEMPPGF VPPHTH+I+E M ILEGS+ V++G VL  GDT VIP GH+YGFT G+ GVRF V R  +AAT+ 
Sbjct:   14 EQGPIFRHLDRLKWETAADQKAEVAALAAQADALGARRSRLTAGEHGFHSHISEMPPGFVVPPHTHDINEIMLILEGSVEVTNGVVLNAGDTAVIPAGHMYGFTAGEQGVRFFVARTGEAATNI 137          
BLAST of mRNA_M-pyrifera_M_contig77525.18247.1 vs. uniprot
Match: A0A7Y2GK09_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2GK09_9ACTN)

HSP 1 Score: 112 bits (280), Expect = 1.800e-29
Identity = 56/120 (46.67%), Postives = 72/120 (60.00%), Query Frame = 0
Query:    8 FRHLSKLDWETKADQKAEVAALAAQADDVGARRSRLTTGEFGFHSHISEMPPGFEVPPHTHNISEHMTILEGSINVSDGTVLETGDTVVIPGGHLYGFTVGDAGVRFLVVRGADAATDFN 127
            +  L++L WE   D   EVA LAA+A    ARR+++TTG  GFHS ISE+P GFE+PPH+H   E M +L G   V  G  L  GD   IPGG  YG T G  G+RF+V+R   + T  +
Sbjct:    6 YYKLAELPWEDPEDAPPEVAELAAKAVGTTARRAQVTTGAIGFHSQISELPAGFEIPPHSHTAPELMVVLAGGGQVVGGPALNAGDVAEIPGGSEYGLTAGPDGIRFMVIRPEASTTHIS 125          
BLAST of mRNA_M-pyrifera_M_contig77525.18247.1 vs. uniprot
Match: A0A6N8YND3_9CHLR (Cupin domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6N8YND3_9CHLR)

HSP 1 Score: 52.8 bits (125), Expect = 3.540e-6
Identity = 33/83 (39.76%), Postives = 45/83 (54.22%), Query Frame = 0
Query:   46 GEFGFHSHISEMPPGFEVPPHTHNISEHMTILEGSINVS-DGTVLETG--DTVVIPGGHLYGF-TVGDAGVRFLVVRGADAAT 124
            G   F + IS  PPG +VP H+HN+ E +T+LEGS     DG V   G  DT  IPGG  + F   GD  ++ + V  + + T
Sbjct:   26 GTDAFTAGISHFPPGLQVPMHSHNVEEMVTVLEGSGECEIDGVVRPVGLFDTTFIPGGVTHCFRNTGDVPMKIMWVYASTSVT 108          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig77525.18247.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A7K1Z8Z6_9ACTN4.130e-5972.58Cupin domain-containing protein n=2 Tax=Acidimicro... [more]
A0A7Y2GK09_9ACTN1.800e-2946.67Uncharacterized protein n=1 Tax=Acidimicrobiales b... [more]
A0A6N8YND3_9CHLR3.540e-639.76Cupin domain-containing protein n=1 Tax=Chloroflex... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013096Cupin 2, conserved barrelPFAMPF07883Cupin_2coord: 55..117
e-value: 1.2E-6
score: 28.1
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10coord: 18..127
e-value: 1.8E-12
score: 48.7
IPR011051RmlC-like cupin domain superfamilySUPERFAMILY51182RmlC-like cupinscoord: 43..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig77525contigM-pyrifera_M_contig77525:509..898 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig77525.18247.1mRNA_M-pyrifera_M_contig77525.18247.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig77525 509..898 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig77525.18247.1 ID=prot_M-pyrifera_M_contig77525.18247.1|Name=mRNA_M-pyrifera_M_contig77525.18247.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=130bp
MHESGPIFRHLSKLDWETKADQKAEVAALAAQADDVGARRSRLTTGEFGF
HSHISEMPPGFEVPPHTHNISEHMTILEGSINVSDGTVLETGDTVVIPGG
HLYGFTVGDAGVRFLVVRGADAATDFNAK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013096Cupin_2
IPR014710RmlC-like_jellyroll
IPR011051RmlC_Cupin_sf