prot_M-pyrifera_M_contig77464.18236.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig77464.18236.1
Unique Nameprot_M-pyrifera_M_contig77464.18236.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length108
Homology
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BLAST of mRNA_M-pyrifera_M_contig77464.18236.1 vs. uniprot
Match: A0A1H6FF12_9GAMM (Serine/threonine-protein kinase D n=1 Tax=Thiotrichales bacterium HS_08 TaxID=1899563 RepID=A0A1H6FF12_9GAMM)

HSP 1 Score: 55.5 bits (132), Expect = 1.220e-6
Identity = 30/76 (39.47%), Postives = 43/76 (56.58%), Query Frame = 0 
Query:    3 RLGHSRVALCLLKNIAANGDVNTQFMMADIYSRSLPELFPRSDITPSMAREWAHSAASSGHAKAQNLLGALYEQGD 78
            R G+ +VAL  L+ +AA+G +  QF +A++Y +  P L   +      A  W H AA   HAKAQN L  +YE G+
Sbjct:  381 RSGNHQVALDKLRQLAADGYIEAQFTLANLYDQGAPGLAEDNR----QAVHWYHEAAEQDHAKAQNNLAVMYEHGE 452
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig77464.18236.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A1H6FF12_9GAMM1.220e-639.47Serine/threonine-protein kinase D n=1 Tax=Thiotric... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 23..63
e-value: 64.0
score: 6.7
coord: 64..102
e-value: 0.02
score: 24.1
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 64..102
e-value: 1.2E-5
score: 25.8
coord: 26..63
e-value: 0.091
score: 13.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 7..108
e-value: 1.8E-15
score: 59.4
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 5..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig77464contigM-pyrifera_M_contig77464:308..631 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig77464.18236.1mRNA_M-pyrifera_M_contig77464.18236.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig77464 308..631 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig77464.18236.1 ID=prot_M-pyrifera_M_contig77464.18236.1|Name=mRNA_M-pyrifera_M_contig77464.18236.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=108bp
LLRLGHSRVALCLLKNIAANGDVNTQFMMADIYSRSLPELFPRSDITPSM
AREWAHSAASSGHAKAQNLLGALYEQGDSFVSKKPEPQRALEWYGKAEAQ
GYAVARAN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf