prot_M-pyrifera_M_contig77460.18233.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig77460.18233.1
Unique Nameprot_M-pyrifera_M_contig77460.18233.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length200
Homology
BLAST of mRNA_M-pyrifera_M_contig77460.18233.1 vs. uniprot
Match: A0A3D1GMD3_9GAMM (DUF1294 domain-containing protein n=1 Tax=Halieaceae bacterium TaxID=2026743 RepID=A0A3D1GMD3_9GAMM)

HSP 1 Score: 364 bits (934), Expect = 8.840e-127
Identity = 182/199 (91.46%), Postives = 188/199 (94.47%), Query Frame = 0
Query:    1 MRHKGKIRSWNDQKGFGFIEPMLGGSDVFLHISACNNRTGRPVVGQIVTFEADVDAQGRSRAANVLLPGATRLTRGRGRNMTSPLLAVGAFFFVAGTMLASVFLLVYALVSVLTFAMYGLDKSAARGGRWRTSEHTLHCLALVGGWPGALLAQSFFRHKSKKPSFRVTFWVTVVFNILIVLWLSTIDINLRKEAWIRPA 199
            MRHKGKIRSWNDQKGFGFIEPMLGGSDVFLHISACNN TGRP VGQ+VTFEADVDAQGRSRAANVLLPGATRLTR RGRNM  PLL VGAFFFVA TMLASVFLLVYALVSVLTFAMYGLDKSAARGGRWRTSE TLH LAL+GGWPGALLAQSFFRHKSKKPSF++TFWVTVVFNILIVLWLSTI+INL  EAW+RPA
Sbjct:    1 MRHKGKIRSWNDQKGFGFIEPMLGGSDVFLHISACNNGTGRPEVGQMVTFEADVDAQGRSRAANVLLPGATRLTRRRGRNMALPLLGVGAFFFVAATMLASVFLLVYALVSVLTFAMYGLDKSAARGGRWRTSELTLHSLALLGGWPGALLAQSFFRHKSKKPSFKMTFWVTVVFNILIVLWLSTIEINLGGEAWVRPA 199          
BLAST of mRNA_M-pyrifera_M_contig77460.18233.1 vs. uniprot
Match: A0A2E7C7F6_9GAMM (DNA-binding protein n=1 Tax=Haliea sp. TaxID=1932666 RepID=A0A2E7C7F6_9GAMM)

HSP 1 Score: 312 bits (799), Expect = 1.270e-105
Identity = 154/199 (77.39%), Postives = 167/199 (83.92%), Query Frame = 0
Query:    1 MRHKGKIRSWNDQKGFGFIEPMLGGSDVFLHISACNNRTGRPVVGQIVTFEADVDAQGRSRAANVLLPGATRLTRGRGRNMTSPLLAVGAFFFVAGTMLASVFLLVYALVSVLTFAMYGLDKSAARGGRWRTSEHTLHCLALVGGWPGALLAQSFFRHKSKKPSFRVTFWVTVVFNILIVLWLSTIDINLRKEAWIRPA 199
            MR KGKIRSWND+KGFGFIEPM G  DVFLHISAC   + RP VGQIVT+EA VD QGRSRAA+VLLPGA R  R   R++T PLLAVGAFF  A TMLA VFLL Y  VS LTFA+YGLDKSAAR GRWRTSEHTLHCLA +GGWPGA+LAQ FFRHKSKK SFRVTFWVTV+FNILIVLWLSTI+INL  +AWI+PA
Sbjct:   40 MRQKGKIRSWNDEKGFGFIEPMTGEKDVFLHISACGQSSRRPEVGQIVTYEAGVDRQGRSRAAHVLLPGAKRRNRKNSRSVTFPLLAVGAFFIAAATMLAPVFLLAYVFVSALTFAVYGLDKSAARSGRWRTSEHTLHCLAFLGGWPGAVLAQRFFRHKSKKSSFRVTFWVTVIFNILIVLWLSTIEINLSGQAWIKPA 238          
BLAST of mRNA_M-pyrifera_M_contig77460.18233.1 vs. uniprot
Match: A0A0F7K5Z8_9GAMM (DNA-binding protein n=2 Tax=Sedimenticola thiotaurini TaxID=1543721 RepID=A0A0F7K5Z8_9GAMM)

HSP 1 Score: 187 bits (476), Expect = 5.050e-57
Identity = 102/203 (50.25%), Postives = 130/203 (64.04%), Query Frame = 0
Query:    1 MRHKGKIRSWNDQKGFGFIEPMLGGSDVFLHISACNNRTGRPVVGQIVTFEADVDAQGRSRAANVLLPGATRLTRGRGRNMTSPLLAVGAFFFVAGTMLASV-------FLLVYALVSVLTFAMYGLDKSAARGGRWRTSEHTLHCLALVGGWPGALLAQSFFRHKSKKPSFRVTFWVTVVFNILIVLWLSTIDINLRKEAWI 196
            MR KGK+ SWN+++GFGFI PM GG  VF+HI A +NR  RPV+GQIVTFE   D QGR RA    L G  RL + + +     LL V A FF+    LA +        L+ Y  VS +TF  Y LDKSAAR G WRT E+TLH L+LVGGWPGAL+AQ   RHK++K  F++ FWVTV+ N  + +WL T D ++  + W+
Sbjct:    1 MRVKGKLVSWNEERGFGFIAPMTGGKQVFIHIKAFSNRNRRPVIGQIVTFERSSDKQGRPRAIRATLAG-DRLDK-KSKRGNGGLLIVTAVFFLGVVGLAVLTARLPLPVLMFYIGVSAITFITYALDKSAARTGAWRTKENTLHLLSLVGGWPGALVAQQRLRHKTRKQPFQLVFWVTVLINFGVFVWLFTPDGSVMLDFWL 201          
BLAST of mRNA_M-pyrifera_M_contig77460.18233.1 vs. uniprot
Match: A0A5C8ZT88_9GAMM (DUF1294 domain-containing protein n=1 Tax=Parahaliea maris TaxID=2716870 RepID=A0A5C8ZT88_9GAMM)

HSP 1 Score: 184 bits (466), Expect = 2.710e-55
Identity = 101/191 (52.88%), Postives = 126/191 (65.97%), Query Frame = 0
Query:    1 MRHKGKIRSWNDQKGFGFIEPMLGGSDVFLHISACNNRTGRPVVGQIVTFEADVDAQGRSRAANVLLPGATRLTRGRGRNMTSPLLAVGAFFFVAGTM------LASVFLLVYALVSVLTFAMYGLDKSAARGGRWRTSEHTLHCLALVGGWPGALLAQSFFRHKSKKPSFRVTFWVTVVFNILIVLWLST 185
            MR KGKIRSWNDQKGFGFI P  GG DVF+H+SA   R  RPVVG+I +++   D +GR RAANVLLPG  RL   +G    +  + V   F  A +       L ++ L  Y  +S++TF +Y  DK AA+ G WRTSE TLH L+L GGWPGAL+AQ F RHKSKK SFR  F+VTVV N+ ++  +ST
Sbjct:    1 MRQKGKIRSWNDQKGFGFITPEDGGKDVFMHVSAVRRRGRRPVVGEIASYDLGTDNRGRPRAANVLLPG-DRLKPAQGTKGRTVAVVVAIVFLCAISAAVVVGKLPALILWAYIGLSIITFFVYAFDKVAAKDGAWRTSEGTLHGLSLFGGWPGALVAQQFLRHKSKKQSFRSMFFVTVVLNLGMLAGMST 190          
BLAST of mRNA_M-pyrifera_M_contig77460.18233.1 vs. uniprot
Match: UPI001C99FC1C (DUF1294 domain-containing protein n=1 Tax=Ferrimonas balearica TaxID=44012 RepID=UPI001C99FC1C)

HSP 1 Score: 182 bits (463), Expect = 5.490e-55
Identity = 98/192 (51.04%), Postives = 122/192 (63.54%), Query Frame = 0
Query:    1 MRHKGKIRSWNDQKGFGFIEPMLGGSDVFLHISACNNRTGRPVVGQIVTFEADVDAQGRSRAANVLLPGATRLTRGRGRNMTSPLLAVGAFFFVAGTMLA-------SVFLLVYALVSVLTFAMYGLDKSAARGGRWRTSEHTLHCLALVGGWPGALLAQSFFRHKSKKPSFRVTFWVTVVFNILIVLWLST 185
            MR KGK+  W+D KG+GFIEP  GG  VFLHI+A N R GRP +GQ+VT+    D +GR RA+ V LPG  RL + R RN       V +  F+ G + A        VFL++Y + SV+TF  Y  DK AA+  RWR SE+TLH  +L+GGWPGALLAQ F RHK++KP FR  FW TV+ N L   WL T
Sbjct:    4 MRIKGKVTFWDDDKGYGFIEPCSGGDRVFLHITALNQRLGRPELGQLVTYTPATDKEGRHRASEVTLPG-ERLVK-RERNQPQLFSIVLSLLFLGGVVAAVLYSHLHPVFLVLYLVASVITFFAYAEDKYAAKNDRWRVSENTLHMFSLLGGWPGALLAQQFLRHKTQKPLFRFNFWTTVLLNGLAFAWLFT 193          
BLAST of mRNA_M-pyrifera_M_contig77460.18233.1 vs. uniprot
Match: A0A3L7DYZ6_9GAMM (DUF1294 domain-containing protein n=1 Tax=Seongchinamella sediminis TaxID=2283635 RepID=A0A3L7DYZ6_9GAMM)

HSP 1 Score: 181 bits (458), Expect = 4.390e-54
Identity = 97/188 (51.60%), Postives = 118/188 (62.77%), Query Frame = 0
Query:    1 MRHKGKIRSWNDQKGFGFIEPMLGGSDVFLHISACNNRTGRPVVGQIVTFEADVDAQGRSRAANVLLPGATRLTRGRGRNMTSPLLAVGAF-----FFVAGTMLASVFLLVYALVSVLTFAMYGLDKSAARGGRWRTSEHTLHCLALVGGWPGALLAQSFFRHKSKKPSFRVTFWVTVVFNILIVLWL 183
            M+ KGKIRSWNDQKGFGFI+P  GG DVFLHISA  NR  RP  GQ+V F    D +GR RA   +L G    +  R    T  L+  G F     F V    + +  L +Y   S++TF  Y LDK+AA+ G WRT E TLH L+L+GGWPGAL+AQ   RHKS+K SFR  FWVTVV N+ ++ WL
Sbjct:    1 MQRKGKIRSWNDQKGFGFIQPEGGGKDVFLHISAFRNRDHRPEDGQLVAFTLTTDERGRPRADQAMLQGKGINSSRRRSGETGALVLAGLFLALVVFLVVMNWVPAFILWLYLGASLVTFMAYALDKNAAQHGHWRTKEGTLHWLSLIGGWPGALVAQQTLRHKSRKRSFRSAFWVTVVLNVAVLGWL 188          
BLAST of mRNA_M-pyrifera_M_contig77460.18233.1 vs. uniprot
Match: D8KBH6_NITWC (Cold-shock DNA-binding domain protein n=2 Tax=Nitrosococcus TaxID=1227 RepID=D8KBH6_NITWC)

HSP 1 Score: 180 bits (457), Expect = 7.930e-54
Identity = 97/199 (48.74%), Postives = 117/199 (58.79%), Query Frame = 0
Query:    1 MRHKGKIRSWNDQKGFGFIEPMLGGSDVFLHISACNNRTGRPVVGQIVTFEADVDAQGRSRAANVLLPGATRLTRGRGRNMTSPLLAVGAFFFVAGTMLASVF----LLVYALVSVLTFAMYGLDKSAARGGRWRTSEHTLHCLALVGGWPGALLAQSFFRHKSKKPSFRVTFWVTVVFNILIVLWLSTIDINLRKEAW 195
            MR KG+I SWND+KG+GFI PM GG  VF HI A  NR  RP VG  VTF    DA+GR  A   ++ G  +  + +  +    +LA G    V   +  S      LL+Y +VS   F  Y LDKSAA+ G WRTSE TLH LALVGGWPGAL+AQS  RHKS+K  FR  FW TVV N    +WL T +     +AW
Sbjct:    1 MRMKGEIASWNDEKGYGFISPMRGGDRVFAHIKAFVNRGRRPAVGDAVTFSMSTDARGRHCAKEAIIAGVPKTEKSKRSSALPNVLAAGFLLIVVSAVSVSAIPMQILLLYLVVSTAAFGAYALDKSAAKRGAWRTSESTLHLLALVGGWPGALIAQSRLRHKSRKQPFRAVFWATVVMNCAAFVWLFTPE---GAKAW 196          
BLAST of mRNA_M-pyrifera_M_contig77460.18233.1 vs. uniprot
Match: UPI0006841683 (cold shock and DUF1294 domain-containing protein n=1 Tax=Marinobacterium jannaschii TaxID=64970 RepID=UPI0006841683)

HSP 1 Score: 179 bits (454), Expect = 1.260e-53
Identity = 92/188 (48.94%), Postives = 117/188 (62.23%), Query Frame = 0
Query:    1 MRHKGKIRSWNDQKGFGFIEPMLGGSDVFLHISACNNRTGRPVVGQIVTFEADVDAQGRSRAANVLLPGATRLTRGRGRNMTSPLLAVGAFFFVAGTM-----LASVFLLVYALVSVLTFAMYGLDKSAARGGRWRTSEHTLHCLALVGGWPGALLAQSFFRHKSKKPSFRVTFWVTVVFNILIVLWL 183
            MR+KGK+ SWND KGFGFIEP LGG +VFLHI A + R  RP VG  V +    D QGR  AA V   G  ++    GR+   P++A+  F  + G       +  +   +Y + S++TF  Y  DKSAAR GRWRT E TLH LAL+GGWPGA+ AQ   RHKS K SF+V FW+T++ N  + LWL
Sbjct:    1 MRNKGKVASWNDDKGFGFIEPCLGGKNVFLHIKAFDQRGRRPEVGNFVNYSLAADKQGRPCAAKVSYDGERKMKAKSGRSSALPMVAI-VFLGIIGLSAWMQKIPMLLAALYVVASLITFLTYASDKSAARQGRWRTPESTLHLLALIGGWPGAVFAQQILRHKSSKRSFKVVFWLTLLLNCTVFLWL 187          
BLAST of mRNA_M-pyrifera_M_contig77460.18233.1 vs. uniprot
Match: A0A558DW18_9GAMM (DUF1294 domain-containing protein n=1 Tax=Sedimenticola selenatireducens TaxID=191960 RepID=A0A558DW18_9GAMM)

HSP 1 Score: 176 bits (445), Expect = 2.490e-52
Identity = 92/191 (48.17%), Postives = 115/191 (60.21%), Query Frame = 0
Query:    1 MRHKGKIRSWNDQKGFGFIEPMLGGSDVFLHISACNNRTGRPVVGQIVTFEADVDAQGRSRAANVLLPGATRLTRGRGRNMTSPLLAVGAFFFVAGTMLAS------VFLLVYALVSVLTFAMYGLDKSAARGGRWRTSEHTLHCLALVGGWPGALLAQSFFRHKSKKPSFRVTFWVTVVFNILIVLWLST 185
            MR KGKI +WND +GFGF+ P  GG  VF+HI A N+R  RP +GQIVT+    D QGR  A   +L G       R R+    +L    F  V G   A+      +F L Y  VS+ TF +Y LDKSAA+ G WRT E TLH L+L GGWPGAL+AQ   RHKS K SF+ TFW+TV+ N  + +W+ T
Sbjct:    1 MRSKGKITAWNDDRGFGFLIPNTGGKQVFIHIKAFNHRNRRPEIGQIVTYTLSTDKQGRPCATQAILAGDRGQIGKRSRSGVFSILFAVVFLAVVGLSAATARTPLPIFAL-YLAVSIFTFILYALDKSAAKSGAWRTEERTLHLLSLAGGWPGALIAQQRLRHKSSKQSFQFTFWLTVLLNCALFMWIHT 190          
BLAST of mRNA_M-pyrifera_M_contig77460.18233.1 vs. uniprot
Match: A0A0T5PMY4_9ALTE (CSD domain-containing protein n=2 Tax=unclassified Alishewanella TaxID=2628974 RepID=A0A0T5PMY4_9ALTE)

HSP 1 Score: 175 bits (443), Expect = 4.290e-52
Identity = 97/204 (47.55%), Postives = 124/204 (60.78%), Query Frame = 0
Query:    1 MRHKGKIRSWNDQKGFGFIEPMLGGSDVFLHISACNNRTGRPVVGQIVTFEADVDAQGRSRAANVLLPGATRLTRGRGRNMTSPLLAVGAFFFVAGTMLASVF--------LLVYALVSVLTFAMYGLDKSAARGGRWRTSEHTLHCLALVGGWPGALLAQSFFRHKSKKPSFRVTFWVTVVFNILIVLWLSTIDINLRKEAWI 196
            MR KGKI  W+D KGFGFI+PML G  VF+HI A  NR  RPV+G++VT+    D QGR +A +V   G     R       +PLL V  F   AG +  ++F        L VYAL+SVLTF  Y  DK  A+ GRWRT E TL  LA++GGWPGALLAQ++ RHKS+K  F V FW  VV N++ + W ++    LR + W+
Sbjct:    1 MRIKGKITQWDDAKGFGFIQPMLKGERVFVHIKALQNRARRPVLGEVVTYSLGQDEQGRLQAQDVTFAGEKHRIRTAKTASKAPLLLVLGF---AGVLTLALFFGTLPLYVLAVYALLSVLTFIAYWWDKRQAQAGRWRTQESTLQLLAVLGGWPGALLAQAYLRHKSQKRPFLVVFWFAVVVNLVALSWAASQQF-LRLQVWL 200          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig77460.18233.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D1GMD3_9GAMM8.840e-12791.46DUF1294 domain-containing protein n=1 Tax=Halieace... [more]
A0A2E7C7F6_9GAMM1.270e-10577.39DNA-binding protein n=1 Tax=Haliea sp. TaxID=19326... [more]
A0A0F7K5Z8_9GAMM5.050e-5750.25DNA-binding protein n=2 Tax=Sedimenticola thiotaur... [more]
A0A5C8ZT88_9GAMM2.710e-5552.88DUF1294 domain-containing protein n=1 Tax=Parahali... [more]
UPI001C99FC1C5.490e-5551.04DUF1294 domain-containing protein n=1 Tax=Ferrimon... [more]
A0A3L7DYZ6_9GAMM4.390e-5451.60DUF1294 domain-containing protein n=1 Tax=Seongchi... [more]
D8KBH6_NITWC7.930e-5448.74Cold-shock DNA-binding domain protein n=2 Tax=Nitr... [more]
UPI00068416831.260e-5348.94cold shock and DUF1294 domain-containing protein n... [more]
A0A558DW18_9GAMM2.490e-5248.17DUF1294 domain-containing protein n=1 Tax=Sediment... [more]
A0A0T5PMY4_9ALTE4.290e-5247.55CSD domain-containing protein n=2 Tax=unclassified... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011129Cold shock domainSMARTSM00357csp_8coord: 4..68
e-value: 3.2E-8
score: 43.3
NoneNo IPR availableGENE3D2.40.50.140coord: 1..74
e-value: 9.5E-17
score: 62.8
NoneNo IPR availablePANTHERPTHR12962:SF1COLD SHOCK DOMAIN-CONTAINING PROTEIN CG9705coord: 2..183
NoneNo IPR availablePANTHERPTHR12962CALCIUM-REGULATED HEAT STABLE PROTEIN CRHSP-24-RELATEDcoord: 2..183
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 116..134
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..84
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 135..155
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 167..185
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 156..166
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 85..115
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 186..199
NoneNo IPR availablePROSITEPS51857CSD_2coord: 2..67
score: 19.427
NoneNo IPR availableTMHMMTMhelixcoord: 134..156
NoneNo IPR availableTMHMMTMhelixcoord: 169..186
NoneNo IPR availableTMHMMTMhelixcoord: 85..119
IPR010718Protein of unknown function DUF1294PFAMPF06961DUF1294coord: 111..165
e-value: 1.3E-24
score: 86.2
IPR002059Cold-shock protein, DNA-bindingPFAMPF00313CSDcoord: 4..66
e-value: 1.7E-11
score: 43.8
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 1..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig77460contigM-pyrifera_M_contig77460:249..848 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig77460.18233.1mRNA_M-pyrifera_M_contig77460.18233.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig77460 249..848 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig77460.18233.1 ID=prot_M-pyrifera_M_contig77460.18233.1|Name=mRNA_M-pyrifera_M_contig77460.18233.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=200bp
MRHKGKIRSWNDQKGFGFIEPMLGGSDVFLHISACNNRTGRPVVGQIVTF
EADVDAQGRSRAANVLLPGATRLTRGRGRNMTSPLLAVGAFFFVAGTMLA
SVFLLVYALVSVLTFAMYGLDKSAARGGRWRTSEHTLHCLALVGGWPGAL
LAQSFFRHKSKKPSFRVTFWVTVVFNILIVLWLSTIDINLRKEAWIRPA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011129CSD
IPR010718DUF1294
IPR002059CSP_DNA-bd
IPR012340NA-bd_OB-fold