prot_M-pyrifera_M_contig77421.18230.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig77421.18230.1
Unique Nameprot_M-pyrifera_M_contig77421.18230.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length160
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig77421.18230.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027272Piezo familyPANTHERPTHR13167UNCHARACTERIZEDcoord: 2..160
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..37
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 149..160
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 38..48
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 49..69
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 127..148
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 70..126
NoneNo IPR availableTMHMMTMhelixcoord: 54..76
NoneNo IPR availableTMHMMTMhelixcoord: 126..148
NoneNo IPR availableTMHMMTMhelixcoord: 15..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig77421contigM-pyrifera_M_contig77421:98..577 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig77421.18230.1mRNA_M-pyrifera_M_contig77421.18230.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig77421 98..598 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig77421.18230.1 ID=prot_M-pyrifera_M_contig77421.18230.1|Name=mRNA_M-pyrifera_M_contig77421.18230.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=160bp
MLRAIVSQTGALVLGGFLLNMLAIPNVLSMLPVLYLLTSIQLQYPRPSAT
SWDFLLLYQVLLIALKFTVQLPLFCMVADHHTGLWAWKAFGACSNLDART
TRADAATTASLVQPVRVWGLSKMGTVYGGPGFVLGILPDFLLLLLLILHR
TALQRRGVWD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027272Piezo