prot_M-pyrifera_M_contig77414.18226.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig77414.18226.1
Unique Nameprot_M-pyrifera_M_contig77414.18226.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length76
Homology
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BLAST of mRNA_M-pyrifera_M_contig77414.18226.1 vs. uniprot
Match: F2B177_RHOBT (Uncharacterized protein n=2 Tax=Rhodopirellula baltica TaxID=265606 RepID=F2B177_RHOBT)

HSP 1 Score: 62.8 bits (151), Expect = 1.910e-11
Identity = 30/46 (65.22%), Postives = 35/46 (76.09%), Query Frame = 0 
Query:   23 EGPPDDKGVEHHPAVDRVICCVPSAIGLSPRIAVLTVRSDGVPGCS 68
            +G PDD+ VEHHPAVDRV+CCVP+AI L   +AV  V SDG  GCS
Sbjct:   23 QGRPDDQCVEHHPAVDRVLCCVPTAIQLPLPVAVPAVGSDGDLGCS 68
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig77414.18226.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
F2B177_RHOBT1.910e-1165.22Uncharacterized protein n=2 Tax=Rhodopirellula bal... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig77414contigM-pyrifera_M_contig77414:118..345 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig77414.18226.1mRNA_M-pyrifera_M_contig77414.18226.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig77414 118..345 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig77414.18226.1 ID=prot_M-pyrifera_M_contig77414.18226.1|Name=mRNA_M-pyrifera_M_contig77414.18226.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=76bp
CRLSHRCNCCDSIGRQNHHNRTEGPPDDKGVEHHPAVDRVICCVPSAIGL
SPRIAVLTVRSDGVPGCSPCLGWPR*
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