prot_M-pyrifera_M_contig7737.18216.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig7737.18216.1
Unique Nameprot_M-pyrifera_M_contig7737.18216.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length453
Homology
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BLAST of mRNA_M-pyrifera_M_contig7737.18216.1 vs. uniprot
Match: D7G6S0_ECTSI (RRM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6S0_ECTSI)

HSP 1 Score: 405 bits (1040), Expect = 1.200e-134
Identity = 273/433 (63.05%), Postives = 287/433 (66.28%), Query Frame = 0 
Query:   40 MPQQYGQXXXXXXXXXXXXXXXSPVVGSW-ER-GYVEEGYMRQDPNILPGS-TPLTSTTSGNGETGFLVP-GGANTM-APLQSFYPPSLYGVPASVYPFQQPGAFPGQYAGGGGXXXXXAAGSTGTGAGSAXXXNFY-GQGGYARSTNPGQPIQTTTNLQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQQIEHKRLKVQHKKDKERDRYVAAPSPRMMGPAATAGRMQQTPQHFRQPLLPQHNSALRHHPGGDDKLPPPSPAADTGSSGVAPGFTVSSAAEED----------HGEASTTEVGIEGSVDPTFGTGSSRPSTGEKY-ARSNDHNSHPXXXXXXXXXXXXXXXXXXRGRGTAGREDETAVYPSGGG--DGKVKVAGGEEKPQEQ 453
            MPQQYGQ XXXX            V GSW ER GYVEEGYMRQDPNI+ G+ TP+ STTSGNGE  F+V  GGAN M AP+QSFYPPSLYGVP SVYP+QQPGAF         XXXXX        AG     NFY GQGGYARSTNPGQPIQTTTNLQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQ IEHKRLKVQHKKDKER+RYV APSPRMMGP   AGRMQQT  HFRQPLLP HN+ LRHH G                  VAPGFT                   G+AS TEVGI+       G   +    G+KY ARSNDH                      RGRGTA   DET  YPS GG  DGK   A G+EKPQ+Q
Sbjct:    1 MPQQYGQQXXXXADGYGGPPPSPVVAGSWGERTGYVEEGYMRQDPNIVAGAGTPIASTTSGNGEGTFMVSTGGANAMGAPMQSFYPPSLYGVPTSVYPYQQPGAFXXXXXXXXXXXXXXXXXXXXXXAGG----NFYAGQGGYARSTNPGQPIQTTTNLQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQ-IEHKRLKVQHKKDKERERYVTAPSPRMMGPGVAAGRMQQTT-HFRQPLLPGHNAGLRHHQGXXXXXXXXXXXXXXXXXXVAPGFTXXXXXXXXXXXXXXXXXXQGDASATEVGIDS------GPRGASTGGGDKYGARSNDH---------------PHLAYIYRGRGTA---DETGGYPSAGGGVDGK---AAGDEKPQDQ 400
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BLAST of mRNA_M-pyrifera_M_contig7737.18216.1 vs. uniprot
Match: A0A6H5L5J0_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5J0_9PHAE)

HSP 1 Score: 259 bits (661), Expect = 1.500e-79
Identity = 168/280 (60.00%), Postives = 177/280 (63.21%), Query Frame = 0 
Query:  188 TTTNLQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQQIEHKRLKVQHKKDKERDRYVAAPSPRMMGPAATAGRMQQTPQHFRQPLLPQHNSALRHHPGGDDKLPPPSPAADTGSSGVAPGFTVSSAAEED-----------HGEASTTEVGIEGSVDPTFGTGSSRPSTGEKY-ARSNDHNSHPXXXXXXXXXXXXXXXXXXRGRGTAGREDETAVYPSGGG--DGKVKVAGGEEKPQEQ 453
            T   L GPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQ IEHKRLKVQHKKDKER+RYV APSPRMMGP   AGRMQQT  HFRQPLLP HN+ LRHH G                  VAPGFT                    G+AS T+VGI+       G   +    G+KY A SNDH                      RGRGTA   DET  YPS GG  DGK   A G+EKPQ+Q
Sbjct:    6 TGDGLAGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQ-IEHKRLKVQHKKDKERERYVTAPSPRMMGPGVAAGRMQQTA-HFRQPLLPAHNAGLRHHQGXXXXXXXXXXXXXXXXXXVAPGFTXXXXXXXXXXXXXXXXXXXQGDASATDVGIDA------GPRGASTGGGDKYGAHSNDH---------------PHLAYIYRGRGTAA--DETGGYPSAGGGVDGK---AAGDEKPQDQ 257
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BLAST of mRNA_M-pyrifera_M_contig7737.18216.1 vs. uniprot
Match: A0A7S2V9D2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V9D2_9STRA)

HSP 1 Score: 144 bits (363), Expect = 6.030e-38
Identity = 74/100 (74.00%), Postives = 82/100 (82.00%), Query Frame = 0 
Query:  182 PGQPIQTTTNLQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQQIEHKRLKVQHKKDKERD 281
            PG PIQTT   QGP+GCNLFVFHIPN+MTN  L+ LF +FGNV+SARIMVEK TGRSRGFGF+SYDN  SA+ AI  MNG+Q I HKRLKVQHKKDK  D
Sbjct:   41 PGAPIQTTPLGQGPEGCNLFVFHIPNSMTNVDLYHLFLRFGNVVSARIMVEKHTGRSRGFGFISYDNAVSAKDAIKGMNGFQ-IGHKRLKVQHKKDKTWD 139
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BLAST of mRNA_M-pyrifera_M_contig7737.18216.1 vs. uniprot
Match: A0A8K1CK88_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CK88_PYTOL)

HSP 1 Score: 143 bits (360), Expect = 3.530e-36
Identity = 75/105 (71.43%), Postives = 84/105 (80.00%), Query Frame = 0 
Query:  175 GYA-RSTNPGQPIQTTTNLQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQQIEHKRLKVQHKKDK 278
            GYA +   PG PIQTT + QGP GCNLFVFHIPN MTN+ LF  F+ +GNVISARIMVEK TGRSRGFGFVSYDN  SAE+AI  MNG+Q +  KRLKVQHKK+K
Sbjct:  113 GYAPQVAGPGPPIQTTESGQGPPGCNLFVFHIPNDMTNQDLFNYFAPYGNVISARIMVEKETGRSRGFGFVSYDNAASAEQAIKAMNGFQ-VGRKRLKVQHKKEK 216
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BLAST of mRNA_M-pyrifera_M_contig7737.18216.1 vs. uniprot
Match: K3WGX7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WGX7_GLOUD)

HSP 1 Score: 142 bits (359), Expect = 4.920e-36
Identity = 75/105 (71.43%), Postives = 84/105 (80.00%), Query Frame = 0 
Query:  175 GYA-RSTNPGQPIQTTTNLQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQQIEHKRLKVQHKKDK 278
            GYA +   PG PIQTT + QGP GCNLFVFHIPN MTN+ LF  F+ FGNVISARIMVEK TGRSRGFGFVSYDN  SA+ AI+ MNG+Q +  KRLKVQHKK+K
Sbjct:  121 GYAPQVAGPGPPIQTTESGQGPPGCNLFVFHIPNDMTNQDLFNYFATFGNVISARIMVEKETGRSRGFGFVSYDNAPSADAAIAGMNGFQ-VGRKRLKVQHKKEK 224
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BLAST of mRNA_M-pyrifera_M_contig7737.18216.1 vs. uniprot
Match: D0NCQ3_PHYIT (CUG-BP-and ETR-3-like factor, putative n=5 Tax=Phytophthora TaxID=4783 RepID=D0NCQ3_PHYIT)

HSP 1 Score: 142 bits (359), Expect = 6.930e-36
Identity = 73/97 (75.26%), Postives = 79/97 (81.44%), Query Frame = 0 
Query:  182 PGQPIQTTTNLQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQQIEHKRLKVQHKKDK 278
            PG PIQTT + QGP GCNLFVFHIPN MTN+ LF  F+ FGNVISARIMVEK TGRSRGFGFVSYDN  SAE AI  MNG+Q +  KRLKVQHKK+K
Sbjct:  133 PGPPIQTTESGQGPPGCNLFVFHIPNDMTNQDLFNYFATFGNVISARIMVEKETGRSRGFGFVSYDNAPSAEAAIKGMNGFQ-VGRKRLKVQHKKEK 228
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BLAST of mRNA_M-pyrifera_M_contig7737.18216.1 vs. uniprot
Match: A0A024URK9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024URK9_9STRA)

HSP 1 Score: 143 bits (360), Expect = 7.130e-36
Identity = 73/97 (75.26%), Postives = 78/97 (80.41%), Query Frame = 0 
Query:  182 PGQPIQTTTNLQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQQIEHKRLKVQHKKDK 278
            PG PIQTT + QGP GCNLFVFHIPN MTN+ LF  F  FGNVISARIMVEK TGRSRGFGFVSYDN  SA+ AI  MNGYQ +  KRLKVQHKK+K
Sbjct:  159 PGPPIQTTESGQGPPGCNLFVFHIPNDMTNQDLFNYFQSFGNVISARIMVEKETGRSRGFGFVSYDNAPSADAAIKGMNGYQ-VGRKRLKVQHKKEK 254
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BLAST of mRNA_M-pyrifera_M_contig7737.18216.1 vs. uniprot
Match: G4ZPR3_PHYSP (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4ZPR3_PHYSP)

HSP 1 Score: 142 bits (359), Expect = 7.690e-36
Identity = 73/97 (75.26%), Postives = 79/97 (81.44%), Query Frame = 0 
Query:  182 PGQPIQTTTNLQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQQIEHKRLKVQHKKDK 278
            PG PIQTT + QGP GCNLFVFHIPN MTN+ LF  F+ FGNVISARIMVEK TGRSRGFGFVSYDN  SAE AI  MNG+Q +  KRLKVQHKK+K
Sbjct:  135 PGPPIQTTESGQGPPGCNLFVFHIPNDMTNQDLFNYFATFGNVISARIMVEKETGRSRGFGFVSYDNAPSAEAAIKGMNGFQ-VGRKRLKVQHKKEK 230
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BLAST of mRNA_M-pyrifera_M_contig7737.18216.1 vs. uniprot
Match: H3GBP4_PHYRM (Uncharacterized protein n=12 Tax=Phytophthora TaxID=4783 RepID=H3GBP4_PHYRM)

HSP 1 Score: 142 bits (359), Expect = 9.200e-36
Identity = 73/97 (75.26%), Postives = 79/97 (81.44%), Query Frame = 0 
Query:  182 PGQPIQTTTNLQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQQIEHKRLKVQHKKDK 278
            PG PIQTT + QGP GCNLFVFHIPN MTN+ LF  F+ FGNVISARIMVEK TGRSRGFGFVSYDN  SAE AI  MNG+Q +  KRLKVQHKK+K
Sbjct:  142 PGPPIQTTESGQGPPGCNLFVFHIPNDMTNQDLFNYFATFGNVISARIMVEKETGRSRGFGFVSYDNAPSAEAAIKGMNGFQ-VGRKRLKVQHKKEK 237
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BLAST of mRNA_M-pyrifera_M_contig7737.18216.1 vs. uniprot
Match: A0A6A3ZKX5_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3ZKX5_9STRA)

HSP 1 Score: 142 bits (358), Expect = 1.070e-35
Identity = 73/97 (75.26%), Postives = 80/97 (82.47%), Query Frame = 0 
Query:  182 PGQPIQTTTNLQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQQIEHKRLKVQHKKDK 278
            PG PIQTT + QGP GCNLFVFHIPN MTN+ LF  F+ FGNVISARIMVEK TGRSRGFGFVSYDN  SAE AI+ MNG+Q +  KRLKVQHKK+K
Sbjct:  135 PGPPIQTTESGQGPPGCNLFVFHIPNDMTNQDLFNYFATFGNVISARIMVEKETGRSRGFGFVSYDNDASAEAAITGMNGFQ-VGRKRLKVQHKKEK 230
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7737.18216.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6S0_ECTSI1.200e-13463.05RRM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L5J0_9PHAE1.500e-7960.00RRM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S2V9D2_9STRA6.030e-3874.00Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A8K1CK88_PYTOL3.530e-3671.43Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WGX7_GLOUD4.920e-3671.43Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
D0NCQ3_PHYIT6.930e-3675.26CUG-BP-and ETR-3-like factor, putative n=5 Tax=Phy... [more]
A0A024URK9_9STRA7.130e-3675.26Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
G4ZPR3_PHYSP7.690e-3675.26Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
H3GBP4_PHYRM9.200e-3675.26Uncharacterized protein n=12 Tax=Phytophthora TaxI... [more]
A0A6A3ZKX5_9STRA1.070e-3575.26Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 199..273
e-value: 7.2E-26
score: 101.9
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 200..271
e-value: 2.7E-21
score: 75.2
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 198..277
score: 18.564
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 179..283
e-value: 1.3E-27
score: 98.1
NoneNo IPR availablePANTHERPTHR24012RNA BINDING PROTEINcoord: 156..281
NoneNo IPR availablePANTHERPTHR24012:SF686CUGBP ELAV-LIKE FAMILY MEMBER 1coord: 156..281
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 190..295

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7737contigM-pyrifera_M_contig7737:1707..12386 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7737.18216.1mRNA_M-pyrifera_M_contig7737.18216.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig7737 1707..12386 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig7737.18216.1 ID=prot_M-pyrifera_M_contig7737.18216.1|Name=mRNA_M-pyrifera_M_contig7737.18216.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=453bp
MSYQHQGAADGGRRQAPPYPLLGTNGAAAGRAPAAGVYGMPQQYGQQQQQ
QAEGGYGGPPPSPVVGSWERGYVEEGYMRQDPNILPGSTPLTSTTSGNGE
TGFLVPGGANTMAPLQSFYPPSLYGVPASVYPFQQPGAFPGQYAGGGGAG
GGGAAGSTGTGAGSAAGGNFYGQGGYARSTNPGQPIQTTTNLQGPDGCNL
FVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRD
SAEKAISQMNGYQQIEHKRLKVQHKKDKERDRYVAAPSPRMMGPAATAGR
MQQTPQHFRQPLLPQHNSALRHHPGGDDKLPPPSPAADTGSSGVAPGFTV
SSAAEEDHGEASTTEVGIEGSVDPTFGTGSSRPSTGEKYARSNDHNSHPH
PHAHAHPHPHPHLAYIYRGRGTAGREDETAVYPSGGGDGKVKVAGGEEKP
QEQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf