prot_M-pyrifera_M_contig77280.18206.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig77280.18206.1
Unique Nameprot_M-pyrifera_M_contig77280.18206.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length45
Homology
BLAST of mRNA_M-pyrifera_M_contig77280.18206.1 vs. uniprot
Match: UPI001AFB0579 (Uncharacterized protein n=1 Tax=Agreia sp. COWG TaxID=2773266 RepID=UPI001AFB0579)

HSP 1 Score: 59.7 bits (143), Expect = 6.920e-11
Identity = 27/37 (72.97%), Postives = 31/37 (83.78%), Query Frame = 0
Query:    1 TREWRNWQTRRLQVPVPERVWGFKSPLAHNGDDVERG 37
            +REWRNWQTR LQVPV ER WGFKSPLAH  D+++ G
Sbjct:   20 SREWRNWQTRWLQVPVLERAWGFKSPLAH-ADNMKAG 55          
BLAST of mRNA_M-pyrifera_M_contig77280.18206.1 vs. uniprot
Match: A0A1Y5P2D5_9MICO (Uncharacterized protein n=1 Tax=uncultured Microbacterium sp. TaxID=191216 RepID=A0A1Y5P2D5_9MICO)

HSP 1 Score: 58.2 bits (139), Expect = 4.450e-10
Identity = 25/31 (80.65%), Postives = 27/31 (87.10%), Query Frame = 0
Query:    1 TREWRNWQTRRLQVPVPERVWGFKSPLAHNG 31
            +REWRN QTR LQVPVPER WGF SPLAH+G
Sbjct:   36 SREWRNRQTRWLQVPVPERAWGFNSPLAHSG 66          
BLAST of mRNA_M-pyrifera_M_contig77280.18206.1 vs. uniprot
Match: F2RD16_STRVP (Uncharacterized protein n=1 Tax=Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745) TaxID=953739 RepID=F2RD16_STRVP)

HSP 1 Score: 51.6 bits (122), Expect = 6.960e-8
Identity = 22/28 (78.57%), Postives = 23/28 (82.14%), Query Frame = 0
Query:    2 REWRNWQTRRLQVPVPERVWGFKSPLAH 29
            R WRN QTR +QVPVPER WGF SPLAH
Sbjct:    2 RGWRNRQTRWIQVPVPERAWGFNSPLAH 29          
BLAST of mRNA_M-pyrifera_M_contig77280.18206.1 vs. uniprot
Match: A0A2P2BY16_9ZZZZ (Uncharacterized protein n=1 Tax=metagenome TaxID=256318 RepID=A0A2P2BY16_9ZZZZ)

HSP 1 Score: 52.4 bits (124), Expect = 1.130e-6
Identity = 23/30 (76.67%), Postives = 24/30 (80.00%), Query Frame = 0
Query:    1 TREWRNWQTRRLQVPVPERVWGFKSPLAHN 30
            TREWRN QTR +QV V ER WGF SPLAHN
Sbjct:  224 TREWRNRQTRTVQVRVSERTWGFNSPLAHN 253          
BLAST of mRNA_M-pyrifera_M_contig77280.18206.1 vs. uniprot
Match: A0A173LYG4_9MICO (Uncharacterized protein n=1 Tax=Aurantimicrobium minutum TaxID=708131 RepID=A0A173LYG4_9MICO)

HSP 1 Score: 48.9 bits (115), Expect = 1.770e-6
Identity = 20/23 (86.96%), Postives = 20/23 (86.96%), Query Frame = 0
Query:    7 WQTRRLQVPVPERVWGFKSPLAH 29
            WQTR LQVPVP R WGFKSPLAH
Sbjct:   15 WQTRWLQVPVPARAWGFKSPLAH 37          
BLAST of mRNA_M-pyrifera_M_contig77280.18206.1 vs. uniprot
Match: A0A1V1W0M9_9ACTN (Ph-response regulator protein palh rim21 n=1 Tax=Nocardioides sp. PD653 TaxID=393303 RepID=A0A1V1W0M9_9ACTN)

HSP 1 Score: 45.8 bits (107), Expect = 5.720e-5
Identity = 22/30 (73.33%), Postives = 23/30 (76.67%), Query Frame = 0
Query:    8 QTRRLQVPVPERVWGFKSPLAH---NGDDV 34
            QTR LQVPV ER WGFKSPLAH    GDD+
Sbjct:   65 QTRWLQVPVSERAWGFKSPLAHVSSPGDDL 94          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig77280.18206.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
UPI001AFB05796.920e-1172.97Uncharacterized protein n=1 Tax=Agreia sp. COWG Ta... [more]
A0A1Y5P2D5_9MICO4.450e-1080.65Uncharacterized protein n=1 Tax=uncultured Microba... [more]
F2RD16_STRVP6.960e-878.57Uncharacterized protein n=1 Tax=Streptomyces venez... [more]
A0A2P2BY16_9ZZZZ1.130e-676.67Uncharacterized protein n=1 Tax=metagenome TaxID=2... [more]
A0A173LYG4_9MICO1.770e-686.96Uncharacterized protein n=1 Tax=Aurantimicrobium m... [more]
A0A1V1W0M9_9ACTN5.720e-573.33Ph-response regulator protein palh rim21 n=1 Tax=N... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig77280contigM-pyrifera_M_contig77280:191..325 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig77280.18206.1mRNA_M-pyrifera_M_contig77280.18206.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig77280 191..325 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig77280.18206.1 ID=prot_M-pyrifera_M_contig77280.18206.1|Name=mRNA_M-pyrifera_M_contig77280.18206.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=45bp
TREWRNWQTRRLQVPVPERVWGFKSPLAHNGDDVERGRRFRRPRG
back to top