prot_M-pyrifera_M_contig76738.18086.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig76738.18086.1
Unique Nameprot_M-pyrifera_M_contig76738.18086.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length148
Homology
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BLAST of mRNA_M-pyrifera_M_contig76738.18086.1 vs. uniprot
Match: A0A2E7RKS9_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E7RKS9_9BACT)

HSP 1 Score: 51.6 bits (122), Expect = 5.230e-5
Identity = 24/41 (58.54%), Postives = 31/41 (75.61%), Query Frame = 0 
Query:    1 PTGSQIVSASWDNTLRIWDADLGTELTLLGGRFGHKKRVAS 41
            P+G++IVS SWDNTLRIWDA+ G EL  L G   H++ V+S
Sbjct:    6 PSGTRIVSGSWDNTLRIWDAETGAELQTLRG---HEESVSS 43
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76738.18086.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2E7RKS9_9BACT5.230e-558.54Uncharacterized protein (Fragment) n=1 Tax=Plancto... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 93..107
score: 35.9
coord: 51..65
score: 35.84
coord: 6..20
score: 39.77
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 67..106
e-value: 2.1E-11
score: 53.9
coord: 22..64
e-value: 1.2E-5
score: 34.7
coord: 109..148
e-value: 5.6E-10
score: 49.2
IPR001680WD40 repeatPFAMPF00400WD40coord: 68..106
e-value: 1.5E-10
score: 41.5
coord: 34..64
e-value: 6.8E-7
score: 29.9
coord: 110..148
e-value: 2.7E-8
score: 34.3
coord: 1..19
e-value: 0.016
score: 16.1
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 32..73
score: 15.12
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 74..115
score: 15.22
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 116..148
score: 16.624
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 1..28
score: 11.678
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..77
e-value: 2.8E-25
score: 91.3
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 78..148
e-value: 2.1E-28
score: 101.5
NoneNo IPR availablePANTHERPTHR42968FAMILY NOT NAMEDcoord: 1..107
NoneNo IPR availablePANTHERPTHR42968FAMILY NOT NAMEDcoord: 67..148
NoneNo IPR availablePANTHERPTHR42968:SF10IP10415Pcoord: 1..107
coord: 67..148
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 93..107
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 51..65
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 6..20
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..148
score: 44.478
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 1..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig76738contigM-pyrifera_M_contig76738:2..445 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig76738.18086.1mRNA_M-pyrifera_M_contig76738.18086.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig76738 2..445 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig76738.18086.1 ID=prot_M-pyrifera_M_contig76738.18086.1|Name=mRNA_M-pyrifera_M_contig76738.18086.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=148bp
PTGSQIVSASWDNTLRIWDADLGTELTLLGGRFGHKKRVASCAYSTDGSL
VISGAWDCSVKLWDVSTGECLKTLKGHIKPVNAVAFSEDAERAASASWDC
SIKIWDVYSGKCTATLTGHSQSIRSVTFAPNNRHLISTAADCSMRIWD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf