prot_M-pyrifera_M_contig76651.18065.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig76651.18065.1
Unique Nameprot_M-pyrifera_M_contig76651.18065.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length62
Homology
BLAST of mRNA_M-pyrifera_M_contig76651.18065.1 vs. uniprot
Match: A0A356X295_9BACT (Phage_rep_O domain-containing protein n=2 Tax=Balneolaceae TaxID=1813606 RepID=A0A356X295_9BACT)

HSP 1 Score: 62.4 bits (150), Expect = 5.590e-10
Identity = 32/60 (53.33%), Postives = 40/60 (66.67%), Query Frame = 0
Query:    1 MSLKSFEVAFTRIPNIIIDKYLPELQGSEMSVLTVIFRKTIGFNKEKDRIALSTFEKMSG 60
            MS K     FT  PN  IDK +P + G+   VLTVI RKTIGF+K+ D+IALS FE ++G
Sbjct:    1 MSNKEIGYPFTAYPNYSIDKIMPVIDGNTFKVLTVIVRKTIGFHKKHDKIALSQFEGLTG 60          
BLAST of mRNA_M-pyrifera_M_contig76651.18065.1 vs. uniprot
Match: A0A2D9FRP3_9BACT (Phage_rep_O domain-containing protein n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A2D9FRP3_9BACT)

HSP 1 Score: 61.6 bits (148), Expect = 9.900e-10
Identity = 30/53 (56.60%), Postives = 41/53 (77.36%), Query Frame = 0
Query:   10 FTRIPNIIIDKYLPELQGSEMSVLTVIFRKTIGFNKEKDRIALSTFEKMSGQA 62
            +T++PN I D+   E+  SE+S+L +I RKT GF+K KDRIALSTFEK +G+A
Sbjct:    8 YTQMPNKIFDELQAEIGDSELSLLMIIGRKTCGFHKSKDRIALSTFEKFTGKA 60          
BLAST of mRNA_M-pyrifera_M_contig76651.18065.1 vs. uniprot
Match: A0A2A2GA84_9BACT (Phage_rep_O domain-containing protein n=1 Tax=Aliifodinibius sp. WN023 TaxID=2032627 RepID=A0A2A2GA84_9BACT)

HSP 1 Score: 53.1 bits (126), Expect = 1.250e-6
Identity = 25/56 (44.64%), Postives = 37/56 (66.07%), Query Frame = 0
Query:    7 EVAFTRIPNIIIDKYLPELQGSEMSVLTVIFRKTIGFNKEKDRIALSTFEKMSGQA 62
            E+ +T++PN II+  + EL+G E+ V   I RKT GF+K+ D IALS    ++G A
Sbjct:    7 EIPYTKVPNFIIEDLMAELRGGELKVAIAICRKTFGFHKKTDGIALSQIMDLTGLA 62          
BLAST of mRNA_M-pyrifera_M_contig76651.18065.1 vs. uniprot
Match: A0A1E7HXY2_9DELT (Uncharacterized protein n=1 Tax=Desulfovibrio sp. S3730MH75 TaxID=1869297 RepID=A0A1E7HXY2_9DELT)

HSP 1 Score: 51.2 bits (121), Expect = 5.240e-6
Identity = 20/51 (39.22%), Postives = 36/51 (70.59%), Query Frame = 0
Query:   10 FTRIPNIIIDKYLPELQGSEMSVLTVIFRKTIGFNKEKDRIALSTFEKMSG 60
            FT++PN+++D  + E+  +E+ ++    RKT G+ K +DRI+ S FEK++G
Sbjct:    8 FTQVPNVLLDNQIQEMSKAELKIVLATCRKTFGWQKGRDRISYSQFEKLTG 58          
BLAST of mRNA_M-pyrifera_M_contig76651.18065.1 vs. uniprot
Match: A0A0F9IXP4_9ZZZZ (Phage_rep_O domain-containing protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9IXP4_9ZZZZ)

HSP 1 Score: 50.1 bits (118), Expect = 1.570e-5
Identity = 18/42 (42.86%), Postives = 37/42 (88.10%), Query Frame = 0
Query:   10 FTRIPNIIIDKYLPELQGSEMSVLTVIFRKTIGFNKEKDRIA 51
            +T+ PN+IIDKY+ ++ G+E+ V+++I R+T+G++++KDR++
Sbjct:    7 YTQYPNVIIDKYMRDMTGAEIKVISLIVRQTMGWHRDKDRLS 48          
BLAST of mRNA_M-pyrifera_M_contig76651.18065.1 vs. uniprot
Match: A0A2D8CLX4_9BACT (Phage_rep_O domain-containing protein n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A2D8CLX4_9BACT)

HSP 1 Score: 48.9 bits (115), Expect = 4.140e-5
Identity = 22/58 (37.93%), Postives = 37/58 (63.79%), Query Frame = 0
Query:    3 LKSFEVAFTRIPNIIIDKYLPELQGSEMSVLTVIFRKTIGFNKEKDRIALSTFEKMSG 60
            +K  E  FT+ PN+++D  +P +  S   +L+VI RK+ G+ K+ D I+++ FE  SG
Sbjct:    1 MKKSEFYFTKFPNVLLDDVMPMVGPSAFKILSVIIRKSKGYQKKGDMISITQFEDNSG 58          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76651.18065.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A356X295_9BACT5.590e-1053.33Phage_rep_O domain-containing protein n=2 Tax=Baln... [more]
A0A2D9FRP3_9BACT9.900e-1056.60Phage_rep_O domain-containing protein n=1 Tax=Baln... [more]
A0A2A2GA84_9BACT1.250e-644.64Phage_rep_O domain-containing protein n=1 Tax=Alii... [more]
A0A1E7HXY2_9DELT5.240e-639.22Uncharacterized protein n=1 Tax=Desulfovibrio sp. ... [more]
A0A0F9IXP4_9ZZZZ1.570e-542.86Phage_rep_O domain-containing protein n=1 Tax=mari... [more]
A0A2D8CLX4_9BACT4.140e-537.93Phage_rep_O domain-containing protein n=1 Tax=Baln... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 2..62
e-value: 9.7E-12
score: 47.0
IPR006497Bacteriophage lambda, GpO, N-terminalPFAMPF04492Phage_rep_Ocoord: 9..59
e-value: 9.6E-8
score: 32.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig76651contigM-pyrifera_M_contig76651:839..1024 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig76651.18065.1mRNA_M-pyrifera_M_contig76651.18065.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig76651 839..1024 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig76651.18065.1 ID=prot_M-pyrifera_M_contig76651.18065.1|Name=mRNA_M-pyrifera_M_contig76651.18065.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=62bp
MSLKSFEVAFTRIPNIIIDKYLPELQGSEMSVLTVIFRKTIGFNKEKDRI
ALSTFEKMSGQA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036388WH-like_DNA-bd_sf
IPR006497Phage_lambda_GpO_N