prot_M-pyrifera_M_contig76528.18038.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig76528.18038.1
Unique Nameprot_M-pyrifera_M_contig76528.18038.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length216
Homology
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BLAST of mRNA_M-pyrifera_M_contig76528.18038.1 vs. uniprot
Match: A0A6G6XND5_9VIRU (Putative major capsid protein n=1 Tax=Dishui Lake virophage 2 TaxID=2704064 RepID=A0A6G6XND5_9VIRU)

HSP 1 Score: 68.6 bits (166), Expect = 6.790e-10
Identity = 68/213 (31.92%), Postives = 98/213 (46.01%), Query Frame = 0 
Query:   24 AIKRGARSITYQVITPDGSNNSTNNANFTINVPSDALVNRRIAVRLVNPTITFSVAADAANNAGLRVLNPD-------CDAPQSFPLNRMIQTASAQINNQTISSQIHDNLDALIRTCDDHELFSGVNSASLCQLDNCQD-YDGVYGASYNPLSLGDNY-----QSGRGAFPLQVNSNE---NLDTAAAATASVTCPEW--------IEPLLL 212
            A+K GA   TYQ      ++NS     F I VPS+ +V  R    ++   +TF++ A +   AG +V   +        DA Q+FPLN +  TA+AQINN T++    D L AL+R  D  EL+   NS +    D     Y    G++ NPL   +N      Q  RGAFP+ V        + T A+  ++     W         EPL+L
Sbjct:   24 AVKSGASQTTYQRFPSTSASNSA--LIFNIQVPSENVVIDR--AMMLTSGLTFTIYAGSQTVAGNQVPIGEKAFDYGLTDALQAFPLNSLFTTATAQINNTTVTMNTQDVLPALLRMTDSRELYR-YNSMTPSFPDCAYGAYSAGVGSNNNPLGAYENASYDIDQVPRGAFPVSVEIRHFIAGVYTDASPVSTAVTDTWEIVVSTVVTEPLIL 231
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76528.18038.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6G6XND5_9VIRU6.790e-1031.92Putative major capsid protein n=1 Tax=Dishui Lake ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig76528contigM-pyrifera_M_contig76528:310..957 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig76528.18038.1mRNA_M-pyrifera_M_contig76528.18038.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig76528 310..957 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig76528.18038.1 ID=prot_M-pyrifera_M_contig76528.18038.1|Name=mRNA_M-pyrifera_M_contig76528.18038.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=216bp
MSELKLDKVRVLDSRIAPNKGTIAIKRGARSITYQVITPDGSNNSTNNAN
FTINVPSDALVNRRIAVRLVNPTITFSVAADAANNAGLRVLNPDCDAPQS
FPLNRMIQTASAQINNQTISSQIHDNLDALIRTCDDHELFSGVNSASLCQ
LDNCQDYDGVYGASYNPLSLGDNYQSGRGAFPLQVNSNENLDTAAAATAS
VTCPEWIEPLLLPSLW
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