prot_M-pyrifera_M_contig76464.18024.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig76464.18024.1
Unique Nameprot_M-pyrifera_M_contig76464.18024.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length39
Homology
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BLAST of mRNA_M-pyrifera_M_contig76464.18024.1 vs. uniprot
Match: D7FRE9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRE9_ECTSI)

HSP 1 Score: 58.9 bits (141), Expect = 1.330e-9
Identity = 30/39 (76.92%), Postives = 32/39 (82.05%), Query Frame = 0 
Query:    1 AFGGVTAGTLLATYRGHSVPFYAASMGANYAMGSLAFFG 39
            A  G   GT+LATYRGHSVPFYAASMG NYA+ SLAFFG
Sbjct:   39 ATSGAVFGTVLATYRGHSVPFYAASMGTNYALASLAFFG 77
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76464.18024.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FRE9_ECTSI1.330e-976.92Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig76464contigM-pyrifera_M_contig76464:155..271 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig76464.18024.1mRNA_M-pyrifera_M_contig76464.18024.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig76464 155..271 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig76464.18024.1 ID=prot_M-pyrifera_M_contig76464.18024.1|Name=mRNA_M-pyrifera_M_contig76464.18024.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=39bp
AFGGVTAGTLLATYRGHSVPFYAASMGANYAMGSLAFFG
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