prot_M-pyrifera_M_contig7642.18016.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig7642.18016.1
Unique Nameprot_M-pyrifera_M_contig7642.18016.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length957
Homology
BLAST of mRNA_M-pyrifera_M_contig7642.18016.1 vs. uniprot
Match: A0A6H5KYM4_9PHAE (MYB protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYM4_9PHAE)

HSP 1 Score: 342 bits (878), Expect = 8.440e-98
Identity = 412/1041 (39.58%), Postives = 494/1041 (47.45%), Query Frame = 0
Query:    1 RTDNHIKNHWNSSMKRRLQMYLERTYGSAYS-----GGPSAEAASPEQP---EGDPV-KEKKGRAAKQKXXXXXXX--DGGRFDLRGDLNGAVRAVRSSKSSGNVGRPKGSKQKQETVKAAKGKKSDPADKKKAKNKQASXXXXRPPG---------------------------KNMTPALPGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVEVDIHSGFGTPGRSVWRDGGGGLPAPGVRHNKYMKCASPWRASLSCRQSPYTGS-----KRSPSDAGLEGASRPDQRERAGPAPCGFSGPGDSEKWDA-MKDVVYTPSKKPVLSGA--EMLSPDALETSFIASYDAASDAGMLPTFSPYSQSSRQGDAASPGR----GAFSRSLLSPPRSSGKGCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGRVGRYRXXXXXXXXXXXXXXXXXXXXXXXXMHGRARVWPSPRKGYASQAEGVGGGDRGRVVGQGARFSARPHEXXXXXXXXXXRALLSPDRPSRNHHWKGSA-ERERAMYDYDSDGADAGGTSTRGSPSGARG-CSPRSGRRGRGDEGRRVTSSRGDPYEPWGDEREGSWNGEAEVTQGGGEDEEEETEG---ETSESAYTPSNTQGRG-----GLKRRSDARAG--SASHLTPA-----LDRGIMDDTLLAAVSLVSFQKPRVNDAPRLRGPLGTNALRVTLGTPVVEAGTSSISTSVQAKLSLPRTAPTPTAPSLPGNGGSXXXXXXXXXXXXXXXKDLRGPR--AAWAARLERSRGDXXXXXXXXXXXXXXXXXXXXXXXXGVHLSASSASKARVASTPRGMFDAVSPAAPVEENGTPYSVCRVDRHGSAMKATAQPSAHEEHRREAGAGEDADGGEEMAGGAHG---------------GEAMCRTPLKQMERRGAAGSLRGHVASREGWSG---GSCATPPSVA----RGTPCSGSKFRSGDGDE-SDYSDYEQYCAVKPTPSKRVATPPSATKRLFAD 949
            RTDNHIKNHWNSSMKRRLQ+YLE+TYGSAY      G PS +A +   P    G+   K KK RAAK K         +GGRFDLRGD++ A+RAVRS K++G VGRPKGS    + V +A         KK+ K     XXXX                               K  +       XXXXXXXXXXXXXXX                                      + E +   G GT       +GGGG+ A   +   +        +    R+    G      KRS  +AGL G+ RPD+R+R G     F    +   W A M+D   TPSKKP L+G+  + LSP ALET  IASYDA SD+ +LPT SP+SQ+SR G  ASP R    G F RSLLSPPRS+GK                                   G                           +H R + W SP +G  ++A G  GG      G+G      P +            L +P +  R+  WK +  + E+  +      A A G +   +P  AR   + RSGR G GD+ R+ TSS GDP+ PWG    G    +A     G     ++ EG   ETS S     + Q R      G+ R         + SH TP+      D    DDTL AA SLVSFQKPRV +APRL+GPLGT+ALRVTLGTPVV  GT SIS+SVQAKLSLPRT+P    PS P      XXXXXXXXXXXX    LR P   A  AA LE                   XXXXXXXXXX   L AS+ +  R +    GMFDAVSP APV+E+GTPYSVCRVDR G    AT   +A  E + E G+                                E +C TPLK      AA       AS  GW G   G  ATPP +A     GTPCSGSKFRS D DE SDYSDYE YC+VKPTP+KRV +PPSATKRLFAD
Sbjct:  147 RTDNHIKNHWNSSMKRRLQVYLEKTYGSAYGDVPEQGQPSGKAEATPSPLLIGGESGGKGKKRRAAKHKLNKSATFVPEGGRFDLRGDVDSALRAVRSGKAAGAVGRPKGSSNSSKRVSSAA--------KKETKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATKKKTSAGAKRVXXXXXXXXXXXXXXXXRKKTKRSRPGTGGAVELGGTAQSTSDEDPRFWDKAGDENSESEDRDGVGT-------EGGGGVDAD-CKGRSWCGATGASSSVFDFRRDHPGGKGGGSGKRSSVEAGLAGSPRPDRRDRVG-IHADFMMARECHDWAASMRDNANTPSKKPNLTGSSTDTLSPIALETKLIASYDAGSDSSILPTLSPFSQTSRLG-YASPSRDGGGGQFGRSLLSPPRSAGK---------LMYGSEGGGRVWSSSPNGPATLGSHAGSSSTDSLEAARFSLSPFPRSGGGGLGMLHLRDKAWASPIRG--NRAAGREGGHAEERDGKGVAKDKGPQQQELVGG-----GLPTPSKSPRSRDWKAAVGDSEKRFFAA----AAANGAAAAITPGEAREMAAKRSGRVGGGDQ-RQSTSSPGDPFGPWGRRERGESRDDARDAAAG-----KDREGHRVETSSSWSCDKSEQEREDTTPPGVPRNPKCLGTPCAPSHTTPSPPATSTDTSDADDTLQAAASLVSFQKPRVGEAPRLKGPLGTSALRVTLGTPVVSTGTPSISSSVQAKLSLPRTSPPRGCPSFPDKETGGXXXXXXXXXXXXVAAGLRDPMETAYRAAGLE-----------VGSSAEGGXXXXXXXXXXXSFLGASAEAVKRKSGPCNGMFDAVSPTAPVQESGTPYSVCRVDRKGR-RNATPHAAASAEQKTEHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXATCVAEPLCHTPLKPAAAGRAAAPEAAARAS--GWLGSVSGPWATPPPMAVNMTMGTPCSGSKFRSADDDEESDYSDYETYCSVKPTPTKRVLSPPSATKRLFAD 1129          
BLAST of mRNA_M-pyrifera_M_contig7642.18016.1 vs. uniprot
Match: D7G7U2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7U2_ECTSI)

HSP 1 Score: 277 bits (708), Expect = 1.700e-77
Identity = 305/725 (42.07%), Postives = 366/725 (50.48%), Query Frame = 0
Query:  288 PGDSEKWDA-MKDVVYTPSKKPVLSGA--EMLSPDALETSFIASYDAASDAGMLPTFSPYSQSSRQGDAASPGR----GAFSRSLLSPPRSSGK---GCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGRVGRYRXXXXXXXXXXXXXXXXXXXXXXXXMHGRARVWPSPRKGYASQAEGVGGGDRGRVVGQGARFSARPHEXXXXXXXXXXRALLSPDRPSRNHHWKGSA-ERERAMYDYDSDGADAGGTSTRGSPSGARG-CSPRSGRRGRGDEGRRVTSSRGDPYEPWGD-EREGSWNGEAEVTQGGGEDEEEETEGETSESAYTPSNTQGRG-----GLKRRSDARAG--SASHLTPA-----LDRGIMDDTLLAAVSLVSFQKPRVNDAPRLRGPLGTNALRVTLGTPVVEAGTSSISTSVQAKLSLPRTAPTPTAPSLPGN--GGSXXXXXXXXXXXXXXXKDLRGPRAAWAARLERSRGDXXXXXXXXXXXXXXXXXXXXXXXXGVHLSASSASKARVASTPRGMFDAVSPAAPVEENGTPYSVCRVDRHGSAMKATAQPSAHEEHRREAGAGEDADGGEEM------------------AGGAHGGEAMCRTPLKQMERRGAAGSLRGHVASREGWSG---GSCATPP----SVARGTPCSGSKFRSGDGDE-SDYSDYEQYCAVKPTPSKRVATPPSATKRLFADA--AEEGMAR 957
            P + + W A M+D   TPSKKP L+G+  + LSP ALET  IASYDA SD+ +LPT SP+SQ+SR G  ASP R    G F RSLLSPPRS+GK   G G                            E    R+          XXXXXX         +H R + W SP +G   +A G  GG      G+G      P +            L +P +  R+  WK +  + E+  +                +P  AR   + RS R G GD+ R+  +S GDP+  WG  ER GS +G  +    GG+D E     ETS S     + Q R      G+ R         + SH TP+      D    DDTL AA SLVSFQKPR+ +APRL+GPLGT+ALRVTLGTPVV  GT SIS+SVQAKLSLPRT+P    PS P    GG XXXXXXXXXXX    +D     A  AA LE                    XXXXXXXXX   L AS+ +  R +    GMFDAVSP APV+E+GTPYSVCRV+R G    AT   +A  + + E G+                            A    G E +C TPLK      AA    G  A   GWSG   G  ATPP    ++  GTPCSGSKFRS D DE SDYSDYE YC+VKPTPSKRV +PPSATKRLFAD   AE G+ R
Sbjct:    3 PRECDDWAASMRDTSNTPSKKPNLTGSSTDTLSPIALETKLIASYDAGSDSSILPTLSPFSQTSRLG-YASPSRDGNGGQFGRSLLSPPRSAGKLMYGSGGRGRVWSSSPNGPATLGSHAGSSSTDSLE--AARFSLSPFPRSGGXXXXXXLGM------LHLRDKAWASPVRG--DRAAGKEGGHAEERDGKGVAKDKGPQQQGLVGG-----GLPTPSKSPRSRDWKAAVGDSEKRFFXXXXXXXXXXXXXXXITPEEAREMAAKRSWRVGGGDQ-RQSPASPGDPFGSWGRRERGGSRDGARDAA--GGKDREAHRV-ETSSSWSCDKSEQEREDTTPPGVPRHPKCLGTPRAPSHTTPSPPATSTDASDADDTLQAAASLVSFQKPRLGEAPRLKGPLGTSALRVTLGTPVVSTGTPSISSSVQAKLSLPRTSPPRGPPSFPAKETGGXXXXXXXXXXXXAAGLRDPMET-AYRAAGLE------------VGSSAEGGXXXXXXXXXXXXLGASAEAVKRKSGPSNGMFDAVSPTAPVQESGTPYSVCRVERKGR-PNATPPAAASADQKTEHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAATCGAEPLCHTPLKPAAAGRAAAP--GMAARASGWSGSVSGPWATPPPMSMNMTMGTPCSGSKFRSADDDEESDYSDYETYCSVKPTPSKRVLSPPSATKRLFADVGDAETGLVR 691          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7642.18016.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KYM4_9PHAE8.440e-9839.58MYB protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP... [more]
D7G7U2_ECTSI1.700e-7742.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 1..18
score: 11.446

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7642contigM-pyrifera_M_contig7642:1311..8262 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7642.18016.1mRNA_M-pyrifera_M_contig7642.18016.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig7642 1311..8262 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig7642.18016.1 ID=prot_M-pyrifera_M_contig7642.18016.1|Name=mRNA_M-pyrifera_M_contig7642.18016.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=957bp
RTDNHIKNHWNSSMKRRLQMYLERTYGSAYSGGPSAEAASPEQPEGDPVK
EKKGRAAKQKPKPPPPPDGGRFDLRGDLNGAVRAVRSSKSSGNVGRPKGS
KQKQETVKAAKGKKSDPADKKKAKNKQASSSKKRPPGKNMTPALPGSGGG
GDSPPGRNASQGYYESSSDGEPRQRLGGGGAGYTGEEGGDDEEEEDEREE
EDVEVDIHSGFGTPGRSVWRDGGGGLPAPGVRHNKYMKCASPWRASLSCR
QSPYTGSKRSPSDAGLEGASRPDQRERAGPAPCGFSGPGDSEKWDAMKDV
VYTPSKKPVLSGAEMLSPDALETSFIASYDAASDAGMLPTFSPYSQSSRQ
GDAASPGRGAFSRSLLSPPRSSGKGCGGGGGGGGGGGGSGGGGGGGSSGG
GGGGGEGRVGRYRGGGGGGGGGGGGGGGGGGGDGGGGMHGRARVWPSPRK
GYASQAEGVGGGDRGRVVGQGARFSARPHEEEEEDDDGGGRALLSPDRPS
RNHHWKGSAERERAMYDYDSDGADAGGTSTRGSPSGARGCSPRSGRRGRG
DEGRRVTSSRGDPYEPWGDEREGSWNGEAEVTQGGGEDEEEETEGETSES
AYTPSNTQGRGGLKRRSDARAGSASHLTPALDRGIMDDTLLAAVSLVSFQ
KPRVNDAPRLRGPLGTNALRVTLGTPVVEAGTSSISTSVQAKLSLPRTAP
TPTAPSLPGNGGSNGGSRGGDAGGGEGGKDLRGPRAAWAARLERSRGDGN
GGSGGGGVGGGSGGRGRAQGSGGVHLSASSASKARVASTPRGMFDAVSPA
APVEENGTPYSVCRVDRHGSAMKATAQPSAHEEHRREAGAGEDADGGEEM
AGGAHGGEAMCRTPLKQMERRGAAGSLRGHVASREGWSGGSCATPPSVAR
GTPCSGSKFRSGDGDESDYSDYEQYCAVKPTPSKRVATPPSATKRLFADA
AEEGMAR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017930Myb_dom