prot_M-pyrifera_M_contig76398.18010.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig76398.18010.1
Unique Nameprot_M-pyrifera_M_contig76398.18010.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length39
Homology
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BLAST of mRNA_M-pyrifera_M_contig76398.18010.1 vs. uniprot
Match: D8LHR8_ECTSI (CTLH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHR8_ECTSI)

HSP 1 Score: 66.6 bits (161), Expect = 8.910e-12
Identity = 28/39 (71.79%), Postives = 34/39 (87.18%), Query Frame = 0 
Query:    1 MRGSYPIRAVGFSPDGGLFAAGSNDRALRVCRTPTEAEL 39
            + GS+P+R+VGFS DGGLFA G NDR LRVC+TP+EAEL
Sbjct:  713 VSGSHPVRSVGFSADGGLFAVGCNDRTLRVCKTPSEAEL 751
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76398.18010.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LHR8_ECTSI8.910e-1271.79CTLH domain-containing protein n=2 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 2..39
e-value: 9.9E-6
score: 26.6
IPR011047Quinoprotein alcohol dehydrogenase-like superfamilySUPERFAMILY50998Quinoprotein alcohol dehydrogenase-likecoord: 4..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig76398contigM-pyrifera_M_contig76398:335..451 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig76398.18010.1mRNA_M-pyrifera_M_contig76398.18010.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig76398 305..451 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig76398.18010.1 ID=prot_M-pyrifera_M_contig76398.18010.1|Name=mRNA_M-pyrifera_M_contig76398.18010.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=39bp
MRGSYPIRAVGFSPDGGLFAAGSNDRALRVCRTPTEAEL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR011047Quinoprotein_ADH-like_supfam