prot_M-pyrifera_M_contig73791.17488.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig73791.17488.1
Unique Nameprot_M-pyrifera_M_contig73791.17488.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length272
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig73791.17488.1 vs. uniprot
Match: A0A8C3TQR9_CATUS (Leucine rich repeat containing 40 n=1 Tax=Catharus ustulatus TaxID=91951 RepID=A0A8C3TQR9_CATUS)

HSP 1 Score: 101 bits (251), Expect = 1.340e-20
Identity = 93/270 (34.44%), Postives = 129/270 (47.78%), Query Frame = 0 
Query:    6 EKWWELSDVRRLDVTHNAIAVLGPSFSSLTALQVLRAAHNRLEHVDAAALQSSEALVLVDLSHNALERLP---AVGTSVERLDVSHNRLRHAPALAVGSVLQVLDVSENKSLESLPSSLPASLRQLLVSGCPIRALPKRLEGLEVLEAERCSLCEAPTLPSSLTRANLRQNHLSSLPFLRECNLLDTLLLGLNRISDVSALALSALPCLCVLDLSSNPISSLAPATCLHLRSLHTLDLSNCSLTRLPYTLGFLPNLSRLPLEGNPLRTIR 272
            ++WWE +D+ +L +  N +  L      L AL VL                        D+S+N L  +P   A+  +V RL ++ N+LR  PA      L  +  S   + E L S L      L+ +G  +R L      LE +  +  S+       +SL +  LR+N L SLP    C LL  L  G N+I  ++A  L  L  LCVL+L  N I ++ P     L+ L  LDL+N  ++RLPYTLG LP L  L LEGNPLRTIR
Sbjct:   79 DRWWEQTDLTKLILASNKLQSLSEDVQLLPALTVLD-----------------------DVSNNQLTAIPSSFALLVNVVRLSLAGNQLRELPA-----DLSAMRNSHCWADEFLSSPLSVYHWTLISTG--LRQLDCTKNYLETVPPKLASM-------ASLEQLYLRKNKLRSLPEFPSCKLLKELHAGENQIEMLNAENLKQLSSLCVLELRDNKIKAV-PEEITLLQKLERLDLANNDISRLPYTLGNLPQLKFLALEGNPLRTIR 310
[Close]
BLAST of mRNA_M-pyrifera_M_contig73791.17488.1 vs. uniprot
Match: A0A803V2X3_FICAL (Leucine rich repeat containing 40 n=2 Tax=Ficedula albicollis TaxID=59894 RepID=A0A803V2X3_FICAL)

HSP 1 Score: 80.9 bits (198), Expect = 8.570e-14
Identity = 53/110 (48.18%), Postives = 67/110 (60.91%), Query Frame = 0 
Query:  163 SSLTRANLRQNHLSSLPFLRECNLLDTLLLGLNRISDVSALALSALPCLCVLDLSSNPISSLAPATCLHLRSLHTLDLSNCSLTRLPYTLGFLPNLSRLPLEGNPLRTIR 272
            +SL +  LR+N L +LP    C LL  L  G N+I  ++A  L  L  LCVL+L  N I ++ P     L+ L  LDL+N  ++RLPYTLG LP L  L LEGNPLRTIR
Sbjct:   25 ASLEQLYLRKNKLRALPEFPSCKLLKELHAGENQIEMLNAENLKQLSSLCVLELRDNKIKAV-PEEITVLQKLERLDLANNDISRLPYTLGNLPQLKFLALEGNPLRTIR 133
[Close]
BLAST of mRNA_M-pyrifera_M_contig73791.17488.1 vs. uniprot
Match: K7FEB8_PELSI (Uncharacterized protein n=2 Tax=Pelodiscus sinensis TaxID=13735 RepID=K7FEB8_PELSI)

HSP 1 Score: 80.1 bits (196), Expect = 1.380e-13
Identity = 52/110 (47.27%), Postives = 67/110 (60.91%), Query Frame = 0 
Query:  163 SSLTRANLRQNHLSSLPFLRECNLLDTLLLGLNRISDVSALALSALPCLCVLDLSSNPISSLAPATCLHLRSLHTLDLSNCSLTRLPYTLGFLPNLSRLPLEGNPLRTIR 272
            +SL +  LR+N L +LP    C LL  LL+G N+I  ++A  L  L  LCVL+L  N + SL     L L+ L  LDL+N  ++ LPYTLG LP L  L +EGNPLR IR
Sbjct:    2 ASLEQLYLRKNKLQNLPEFPSCKLLKELLVGENQIEVLNAEHLKHLNSLCVLELRDNKLKSLPDEITL-LQGLERLDLTNNDISSLPYTLGNLPQLKLLAVEGNPLRAIR 110
[Close]
BLAST of mRNA_M-pyrifera_M_contig73791.17488.1 vs. uniprot
Match: A0A7K7PWY9_ACRAR (LRC40 protein (Fragment) n=1 Tax=Acrocephalus arundinaceus TaxID=39621 RepID=A0A7K7PWY9_ACRAR)

HSP 1 Score: 72.0 bits (175), Expect = 8.500e-11
Identity = 47/94 (50.00%), Postives = 57/94 (60.64%), Query Frame = 0 
Query:  179 PFLRECNLLDTLLLGLNRISDVSALALSALPCLCVLDLSSNPISSLAPATCLHLRSLHTLDLSNCSLTRLPYTLGFLPNLSRLPLEGNPLRTIR 272
            P L  C LL  L  G N+I  ++A  L  L  LCVL+L  N I ++ P     L+ L  LDL+N  ++RLPYTLG LP L  L LEGNPLRTIR
Sbjct:  260 PELPSCKLLKELHAGENQIEVLNAENLKQLSSLCVLELRDNKIKAV-PEEITVLQKLERLDLANNDISRLPYTLGNLPQLKFLALEGNPLRTIR 352
[Close]
BLAST of mRNA_M-pyrifera_M_contig73791.17488.1 vs. uniprot
Match: A0A7L3GTS3_9AVES (LRC40 protein (Fragment) n=2 Tax=Neognathae TaxID=8825 RepID=A0A7L3GTS3_9AVES)

HSP 1 Score: 72.0 bits (175), Expect = 1.120e-10
Identity = 48/94 (51.06%), Postives = 57/94 (60.64%), Query Frame = 0 
Query:  179 PFLRECNLLDTLLLGLNRISDVSALALSALPCLCVLDLSSNPISSLAPATCLHLRSLHTLDLSNCSLTRLPYTLGFLPNLSRLPLEGNPLRTIR 272
            P L  C LL  L  G N+I  ++A  L  L CL VL+L  N I S+     L L+ L  LDL+N  ++RLPYTLG LP L  L LEGNPLRTIR
Sbjct:  209 PELPSCKLLKELHAGENQIEILNAENLKHLNCLSVLELRDNKIKSVPDEITL-LQKLERLDLANNDISRLPYTLGNLPQLKFLALEGNPLRTIR 301
[Close]
BLAST of mRNA_M-pyrifera_M_contig73791.17488.1 vs. uniprot
Match: A0A7K9WQW4_9PASS (LRC40 protein (Fragment) n=2 Tax=Passeriformes TaxID=9126 RepID=A0A7K9WQW4_9PASS)

HSP 1 Score: 70.9 bits (172), Expect = 2.900e-10
Identity = 46/94 (48.94%), Postives = 55/94 (58.51%), Query Frame = 0 
Query:  179 PFLRECNLLDTLLLGLNRISDVSALALSALPCLCVLDLSSNPISSLAPATCLHLRSLHTLDLSNCSLTRLPYTLGFLPNLSRLPLEGNPLRTIR 272
            P    C LL  L  G N+I  + A  L  L  LCVL+L  N I ++ P     L+ L  LDL+N  ++RLPYTLG LP L  L LEGNPLRTIR
Sbjct:  124 PEFPSCKLLKELHAGENQIETLDAENLQQLSSLCVLELRDNKIKAV-PEEITVLQKLERLDLANNDISRLPYTLGNLPQLKFLALEGNPLRTIR 216
[Close]
BLAST of mRNA_M-pyrifera_M_contig73791.17488.1 vs. uniprot
Match: A0A091E6E2_CORBR (Leucine-rich repeat-containing protein 40 (Fragment) n=4 Tax=Corvus TaxID=30420 RepID=A0A091E6E2_CORBR)

HSP 1 Score: 70.5 bits (171), Expect = 4.310e-10
Identity = 46/94 (48.94%), Postives = 56/94 (59.57%), Query Frame = 0 
Query:  179 PFLRECNLLDTLLLGLNRISDVSALALSALPCLCVLDLSSNPISSLAPATCLHLRSLHTLDLSNCSLTRLPYTLGFLPNLSRLPLEGNPLRTIR 272
            P    C LL  L  G N+I  ++A  L  L  LCVL+L  N I ++ P     L+ L  LDL+N  ++RLPYTLG LP L  L LEGNPLRTIR
Sbjct:  209 PEFPSCKLLKELHAGENQIEILNAENLKQLSSLCVLELRDNKIKAV-PEEITVLQKLERLDLANNDISRLPYTLGNLPQLKFLALEGNPLRTIR 301
[Close]
BLAST of mRNA_M-pyrifera_M_contig73791.17488.1 vs. uniprot
Match: U3JET0_FICAL (Leucine rich repeat containing 40 n=1 Tax=Ficedula albicollis TaxID=59894 RepID=U3JET0_FICAL)

HSP 1 Score: 70.1 bits (170), Expect = 6.040e-10
Identity = 45/89 (50.56%), Postives = 55/89 (61.80%), Query Frame = 0 
Query:  184 CNLLDTLLLGLNRISDVSALALSALPCLCVLDLSSNPISSLAPATCLHLRSLHTLDLSNCSLTRLPYTLGFLPNLSRLPLEGNPLRTIR 272
            C LL  L  G N+I  ++A  L  L  LCVL+L  N I ++ P     L+ L  LDL+N  ++RLPYTLG LP L  L LEGNPLRTIR
Sbjct:  268 CKLLKELHAGENQIEMLNAENLKQLSSLCVLELRDNKIKAV-PEEITVLQKLERLDLANNDISRLPYTLGNLPQLKFLALEGNPLRTIR 355
[Close]
BLAST of mRNA_M-pyrifera_M_contig73791.17488.1 vs. uniprot
Match: A0A7L2AG33_9GRUI (LRC40 protein (Fragment) n=3 Tax=Neognathae TaxID=8825 RepID=A0A7L2AG33_9GRUI)

HSP 1 Score: 69.7 bits (169), Expect = 8.100e-10
Identity = 47/94 (50.00%), Postives = 55/94 (58.51%), Query Frame = 0 
Query:  179 PFLRECNLLDTLLLGLNRISDVSALALSALPCLCVLDLSSNPISSLAPATCLHLRSLHTLDLSNCSLTRLPYTLGFLPNLSRLPLEGNPLRTIR 272
            P    C LL  L  G N+I  ++A  L  L  LCVL+L  N I S+ P     L+ L  LDLSN  ++RLPYTLG LP L  L LEGNPLR IR
Sbjct:  258 PEFPSCKLLKELHAGENQIEILNAENLKHLNSLCVLELRDNKIKSV-PDEITVLQKLERLDLSNNDISRLPYTLGNLPQLKFLALEGNPLRAIR 350
[Close]
BLAST of mRNA_M-pyrifera_M_contig73791.17488.1 vs. uniprot
Match: A0A851FAU2_PITSO (LRC40 protein (Fragment) n=1 Tax=Pitta sordida TaxID=9163 RepID=A0A851FAU2_PITSO)

HSP 1 Score: 68.9 bits (167), Expect = 1.460e-9
Identity = 45/94 (47.87%), Postives = 57/94 (60.64%), Query Frame = 0 
Query:  179 PFLRECNLLDTLLLGLNRISDVSALALSALPCLCVLDLSSNPISSLAPATCLHLRSLHTLDLSNCSLTRLPYTLGFLPNLSRLPLEGNPLRTIR 272
            P    C LL  L  G N+I  ++A  L  L  LCVL+L  N I ++ P   + L+ L  LDL+N  ++RLPYTLG LP+L  L LEGNPLR IR
Sbjct:  248 PEFPSCKLLKELHAGENQIEILNAENLQHLSSLCVLELRDNKIKAV-PEEIVLLQRLERLDLANNDISRLPYTLGNLPHLKFLALEGNPLRAIR 340
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig73791.17488.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8C3TQR9_CATUS1.340e-2034.44Leucine rich repeat containing 40 n=1 Tax=Catharus... [more]
A0A803V2X3_FICAL8.570e-1448.18Leucine rich repeat containing 40 n=2 Tax=Ficedula... [more]
K7FEB8_PELSI1.380e-1347.27Uncharacterized protein n=2 Tax=Pelodiscus sinensi... [more]
A0A7K7PWY9_ACRAR8.500e-1150.00LRC40 protein (Fragment) n=1 Tax=Acrocephalus arun... [more]
A0A7L3GTS3_9AVES1.120e-1051.06LRC40 protein (Fragment) n=2 Tax=Neognathae TaxID=... [more]
A0A7K9WQW4_9PASS2.900e-1048.94LRC40 protein (Fragment) n=2 Tax=Passeriformes Tax... [more]
A0A091E6E2_CORBR4.310e-1048.94Leucine-rich repeat-containing protein 40 (Fragmen... [more]
U3JET0_FICAL6.040e-1050.56Leucine rich repeat containing 40 n=1 Tax=Ficedula... [more]
A0A7L2AG33_9GRUI8.100e-1050.00LRC40 protein (Fragment) n=3 Tax=Neognathae TaxID=... [more]
A0A851FAU2_PITSO1.460e-947.87LRC40 protein (Fragment) n=1 Tax=Pitta sordida Tax... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 34..57
e-value: 4.1
score: 16.4
coord: 232..255
e-value: 5.2
score: 15.6
coord: 79..101
e-value: 160.0
score: 3.3
coord: 208..231
e-value: 0.15
score: 21.1
coord: 11..33
e-value: 83.0
score: 5.7
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 186..272
e-value: 2.1E-15
score: 58.2
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 2..185
e-value: 1.5E-30
score: 108.1
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 187..245
e-value: 3.2E-9
score: 36.4
coord: 14..71
e-value: 1.3E-7
score: 31.3
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 257..272
score: 5.34
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 13..35
score: 4.863
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 80..101
score: 5.502
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 186..207
score: 6.218
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 102..124
score: 5.417
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 60..79
score: 4.917
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 234..256
score: 6.826
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 164..185
score: 6.688
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 36..57
score: 5.125
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 210..231
score: 7.797
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 163..269
coord: 8..159
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 11..271

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig73791contigM-pyrifera_M_contig73791:1..816 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig73791.17488.1mRNA_M-pyrifera_M_contig73791.17488.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig73791 1..816 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig73791.17488.1 ID=prot_M-pyrifera_M_contig73791.17488.1|Name=mRNA_M-pyrifera_M_contig73791.17488.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=272bp
ALEEGEKWWELSDVRRLDVTHNAIAVLGPSFSSLTALQVLRAAHNRLEHV
DAAALQSSEALVLVDLSHNALERLPAVGTSVERLDVSHNRLRHAPALAVG
SVLQVLDVSENKSLESLPSSLPASLRQLLVSGCPIRALPKRLEGLEVLEA
ERCSLCEAPTLPSSLTRANLRQNHLSSLPFLRECNLLDTLLLGLNRISDV
SALALSALPCLCVLDLSSNPISSLAPATCLHLRSLHTLDLSNCSLTRLPY
TLGFLPNLSRLPLEGNPLRTIR
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt