prot_M-pyrifera_M_contig73709.17468.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig73709.17468.1
Unique Nameprot_M-pyrifera_M_contig73709.17468.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length145
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig73709.17468.1 vs. uniprot
Match: A0A517PM68_9PLAN (Internalin-A n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517PM68_9PLAN)

HSP 1 Score: 288 bits (737), Expect = 8.040e-92
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0 
Query:    1 MQAIQKFVSWLDECDPPRAELVRMQMEIISPDFDESRRGELEQKISDLINQNRIRWTRSLDPLGWRAELAMFEIGLINWLYIQGLTDDQAEILQKTPEIRALELDGPQLSESGYQCVCSMSQLDELIIKAERLTEQELEYLEQLP 145
            MQAIQKFVSWLDECDPPRAELVRMQMEIISPDFDESRRGELEQKISDLINQNRIRWTRSLDPLGWRAELAMFEIGLINWLYIQGLTDDQAEILQKTPEIRALELDGPQLSESGYQCVCSMSQLDELIIKAERLTEQELEYLEQLP
Sbjct:   33 MQAIQKFVSWLDECDPPRAELVRMQMEIISPDFDESRRGELEQKISDLINQNRIRWTRSLDPLGWRAELAMFEIGLINWLYIQGLTDDQAEILQKTPEIRALELDGPQLSESGYQCVCSMSQLDELIIKAERLTEQELEYLEQLP 177
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig73709.17468.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A517PM68_9PLAN8.040e-92100.00Internalin-A n=1 Tax=Gimesia chilikensis TaxID=260... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 123..143

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig73709contigM-pyrifera_M_contig73709:388..822 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig73709.17468.1mRNA_M-pyrifera_M_contig73709.17468.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig73709 364..822 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig73709.17468.1 ID=prot_M-pyrifera_M_contig73709.17468.1|Name=mRNA_M-pyrifera_M_contig73709.17468.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=145bp
MQAIQKFVSWLDECDPPRAELVRMQMEIISPDFDESRRGELEQKISDLIN
QNRIRWTRSLDPLGWRAELAMFEIGLINWLYIQGLTDDQAEILQKTPEIR
ALELDGPQLSESGYQCVCSMSQLDELIIKAERLTEQELEYLEQLP
back to top