prot_M-pyrifera_M_contig73700.17462.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig73700.17462.1
Unique Nameprot_M-pyrifera_M_contig73700.17462.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length78
Homology
BLAST of mRNA_M-pyrifera_M_contig73700.17462.1 vs. uniprot
Match: UPI0018DAC0DE (terminase small subunit n=1 Tax=Halomonas venusta TaxID=44935 RepID=UPI0018DAC0DE)

HSP 1 Score: 67.4 bits (163), Expect = 5.160e-12
Identity = 37/61 (60.66%), Postives = 48/61 (78.69%), Query Frame = 0
Query:    4 RLTLRQEKFCLEYLRNDGNGTAAYRAAYSTKRMSSKTVNEKASRLLAQDKIRARIDKSRQN 64
            +LT +QE+FCL YL+  GN + AYR AYSTK M+ KT+NEKASRLLA  KIRAR+++  Q+
Sbjct:    9 KLTAKQERFCLAYLKL-GNASEAYRQAYSTKGMTPKTINEKASRLLAMGKIRARLEELNQS 68          
BLAST of mRNA_M-pyrifera_M_contig73700.17462.1 vs. uniprot
Match: UPI00187BB0A6 (terminase small subunit n=2 Tax=Tenacibaculum piscium TaxID=1458515 RepID=UPI00187BB0A6)

HSP 1 Score: 62.0 bits (149), Expect = 4.170e-10
Identity = 36/75 (48.00%), Postives = 54/75 (72.00%), Query Frame = 0
Query:    4 RLTLRQEKFCLEYLRNDGNGTAAYRAAYSTKRMSSKTVNEKASRLLAQDKIRARIDKSRQNVARRVEVGEAEILQ 78
            +LT +QEKFC  ++++ GN + AYR +YSTK M++KTVNEKASRL   DK++ARI + +  +A R ++   E +Q
Sbjct:   10 KLTPKQEKFCQSFVKS-GNKSEAYRQSYSTKNMTTKTVNEKASRLSYVDKVKARIIELQTGIAERNKISIDECVQ 83          
BLAST of mRNA_M-pyrifera_M_contig73700.17462.1 vs. uniprot
Match: A0A7R7A6F8_9CAUD (Phage terminase small subunit n=3 Tax=root TaxID=1 RepID=A0A7R7A6F8_9CAUD)

HSP 1 Score: 60.8 bits (146), Expect = 4.890e-10
Identity = 33/78 (42.31%), Postives = 51/78 (65.38%), Query Frame = 0
Query:    1 VADRLTLRQEKFCLEYLRNDGNGTAAYRAAYSTKRMSSKTVNEKASRLLAQDKIRARIDKSRQNVARRVEVGEAEILQ 78
            +A +LT +QEKFCLEY++  GN + AYR AY+ K M  +T+  KAS LL +DK+R R+++ R+       +   E++Q
Sbjct:    1 MAKKLTQKQEKFCLEYVKT-GNASEAYRRAYNAKNMKDETIWSKASMLLERDKVRVRVEELRKKAEDEAIMSVQELMQ 77          
BLAST of mRNA_M-pyrifera_M_contig73700.17462.1 vs. uniprot
Match: A0A853GQD6_9BURK (Terminase small subunit n=1 Tax=Alcaligenaceae bacterium TaxID=2021368 RepID=A0A853GQD6_9BURK)

HSP 1 Score: 59.7 bits (143), Expect = 1.470e-9
Identity = 33/61 (54.10%), Postives = 46/61 (75.41%), Query Frame = 0
Query:    5 LTLRQEKFCLEYLRNDGNGTAAYRAAYSTKRMSSKTVNEKASRLLAQDKIRARIDKSRQNV 65
            LT +QE FCL YL   GNG+ AYR AY  K+M+ K+VNEKAS++LA  KI++R+++ R+ V
Sbjct:    4 LTPKQESFCLVYLET-GNGSEAYRQAYQPKKMTEKSVNEKASQMLAMVKIKSRLEELRKPV 63          
BLAST of mRNA_M-pyrifera_M_contig73700.17462.1 vs. uniprot
Match: UPI001468876B (terminase small subunit n=2 Tax=Achromobacter TaxID=222 RepID=UPI001468876B)

HSP 1 Score: 58.2 bits (139), Expect = 6.330e-9
Identity = 33/64 (51.56%), Postives = 45/64 (70.31%), Query Frame = 0
Query:    5 LTLRQEKFCLEYLRNDGNGTAAYRAAYSTKRMSSKTVNEKASRLLAQDKIRARIDKSRQNVARR 68
            LT +QE FCL Y+   GN + AYR AY  K+M+ K+VNEKAS+ LAQ KI++R+++ R  V  R
Sbjct:    3 LTQKQEAFCLAYIET-GNASEAYRRAYKPKKMTDKSVNEKASQFLAQVKIKSRLEELRAPVRER 65          
BLAST of mRNA_M-pyrifera_M_contig73700.17462.1 vs. uniprot
Match: M5A984_9CAUD (Terminase small subunit n=2 Tax=root TaxID=1 RepID=M5A984_9CAUD)

HSP 1 Score: 57.8 bits (138), Expect = 7.750e-9
Identity = 30/59 (50.85%), Postives = 44/59 (74.58%), Query Frame = 0
Query:    4 RLTLRQEKFCLEYLRNDGNGTAAYRAAYSTKRMSSKTVNEKASRLLAQDKIRARIDKSR 62
            +LT +QEKFCLEY++  GN + AYR AY+  +M  +T+  KAS LL +DK+RAR+++ R
Sbjct:    4 KLTQKQEKFCLEYVKT-GNASEAYRKAYNANKMKDETIWSKASILLEKDKVRARVEELR 61          
BLAST of mRNA_M-pyrifera_M_contig73700.17462.1 vs. uniprot
Match: G5H915_9BACT (Uncharacterized protein n=1 Tax=Alistipes indistinctus YIT 12060 TaxID=742725 RepID=G5H915_9BACT)

HSP 1 Score: 58.5 bits (140), Expect = 9.150e-9
Identity = 33/56 (58.93%), Postives = 42/56 (75.00%), Query Frame = 0
Query:    4 RLTLRQEKFCLEYLRNDGNGTAAYRAAYSTKRMSSKTVNEKASRLLAQDKIRARID 59
            +LT++QEKF L+YL   GN + AYR AY   +MS KTV EKAS+LL+  K+RARID
Sbjct:    3 KLTIKQEKFVLKYL-ECGNASEAYRFAYDCSKMSDKTVWEKASKLLSDGKVRARID 57          
BLAST of mRNA_M-pyrifera_M_contig73700.17462.1 vs. uniprot
Match: UPI0003145CCF (terminase small subunit n=1 Tax=Zavarzinella formosa TaxID=360055 RepID=UPI0003145CCF)

HSP 1 Score: 57.4 bits (137), Expect = 1.330e-8
Identity = 32/78 (41.03%), Postives = 51/78 (65.38%), Query Frame = 0
Query:    1 VADRLTLRQEKFCLEYLRNDGNGTAAYRAAYSTKRMSSKTVNEKASRLLAQDKIRARIDKSRQNVARRVEVGEAEILQ 78
            + D+LT +QE FCL+Y+   GN + AYR +Y  K+ + KT+ E ASRLLA  K+ AR+ + R+   ++ +V  A +L+
Sbjct:    1 MTDKLTPKQEAFCLKYIEL-GNASEAYRQSYDAKKATDKTIWEAASRLLADSKVGARVKELRERAIKKHDVTVASLLE 77          
BLAST of mRNA_M-pyrifera_M_contig73700.17462.1 vs. uniprot
Match: A0A6G5YD67_9CAUD (Uncharacterized protein n=1 Tax=Siphoviridae sp. TaxID=2170413 RepID=A0A6G5YD67_9CAUD)

HSP 1 Score: 56.6 bits (135), Expect = 2.460e-8
Identity = 33/77 (42.86%), Postives = 49/77 (63.64%), Query Frame = 0
Query:    1 VADRLTLRQEKFCLEYLRNDGNGTAAYRAAYSTKRMSSKTVNEKASRLLAQDKIRARIDKSRQNVARRVEVGEAEIL 77
            +A+RLT++QE FCL Y+   GN + AYR AY T+ M   TVN  A  +L  DK+ ARI + R +V +R ++   ++L
Sbjct:    1 MANRLTIKQENFCLAYVET-GNASEAYRRAYDTEDMLPATVNRHAHGMLENDKVAARISELRSSVMQRHKITVDDLL 76          
BLAST of mRNA_M-pyrifera_M_contig73700.17462.1 vs. uniprot
Match: Q9CK57_PASMU (Uncharacterized protein n=7 Tax=Pasteurella TaxID=745 RepID=Q9CK57_PASMU)

HSP 1 Score: 56.2 bits (134), Expect = 4.030e-8
Identity = 30/56 (53.57%), Postives = 38/56 (67.86%), Query Frame = 0
Query:    4 RLTLRQEKFCLEYLRNDGNGTAAYRAAYSTKRMSSKTVNEKASRLLAQDKIRARID 59
            +LTL+QE FCL+Y+   GN + AYR AY  + M   T+N KAS LL+  KI ARID
Sbjct:    5 KLTLKQENFCLQYIET-GNASEAYRQAYHAENMKPDTINRKASELLSDGKITARID 59          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig73700.17462.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
UPI0018DAC0DE5.160e-1260.66terminase small subunit n=1 Tax=Halomonas venusta ... [more]
UPI00187BB0A64.170e-1048.00terminase small subunit n=2 Tax=Tenacibaculum pisc... [more]
A0A7R7A6F8_9CAUD4.890e-1042.31Phage terminase small subunit n=3 Tax=root TaxID=1... [more]
A0A853GQD6_9BURK1.470e-954.10Terminase small subunit n=1 Tax=Alcaligenaceae bac... [more]
UPI001468876B6.330e-951.56terminase small subunit n=2 Tax=Achromobacter TaxI... [more]
M5A984_9CAUD7.750e-950.85Terminase small subunit n=2 Tax=root TaxID=1 RepID... [more]
G5H915_9BACT9.150e-958.93Uncharacterized protein n=1 Tax=Alistipes indistin... [more]
UPI0003145CCF1.330e-841.03terminase small subunit n=1 Tax=Zavarzinella formo... [more]
A0A6G5YD67_9CAUD2.460e-842.86Uncharacterized protein n=1 Tax=Siphoviridae sp. T... [more]
Q9CK57_PASMU4.030e-853.57Uncharacterized protein n=7 Tax=Pasteurella TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005335Terminase small subunitPFAMPF03592Terminase_2coord: 5..78
e-value: 3.5E-12
score: 47.0
IPR038713Terminase small subunit, N-terminal domain superfamilyGENE3D1.10.10.1400coord: 2..69
e-value: 6.9E-12
score: 46.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig73700contigM-pyrifera_M_contig73700:16..249 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig73700.17462.1mRNA_M-pyrifera_M_contig73700.17462.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig73700 16..249 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig73700.17462.1 ID=prot_M-pyrifera_M_contig73700.17462.1|Name=mRNA_M-pyrifera_M_contig73700.17462.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=78bp
VADRLTLRQEKFCLEYLRNDGNGTAAYRAAYSTKRMSSKTVNEKASRLLA
QDKIRARIDKSRQNVARRVEVGEAEILQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005335Terminase_ssu
IPR038713Terminase_Gp1_N_sf