prot_M-pyrifera_M_contig7359.17437.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig7359.17437.1
Unique Nameprot_M-pyrifera_M_contig7359.17437.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length1305
Homology
BLAST of mRNA_M-pyrifera_M_contig7359.17437.1 vs. uniprot
Match: D7G2Z1_ECTSI (Chain A, Crystal Structure Of The Brct Repeat Region From The Mediator Of Dna Damage Checkpoint Protein 1, Mdc1 pdb|2ADO|B Chain B, Crystal Structure Of The Brct Repeat Region From The Mediator Of Dna n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z1_ECTSI)

HSP 1 Score: 181 bits (459), Expect = 2.920e-42
Identity = 113/210 (53.81%), Postives = 135/210 (64.29%), Query Frame = 0
Query:    1 GETTVGRNDDEDITISDPSVSGRHASIDIVELPGDGGKRVTVKDLRSTNGTYIIDAETGSKTRLAPKKATMIPEEGCLVHFGGAICKVAMGP-PARDPCDSDGGDGNNIYDMDTQLPGA-DLDELDEGQGGVAAG-----DKDKGG---GTEPLATVDEEGSKPDVEPVVGVADVEAEGGGSAADGEDKRETLVHEEALPGGVVEDGGEK 200
            GETTVGRN+D+DIT++DPSVSG HA I+++E+PG GGKR+TVKDLRSTNGTYIID ETG K RLAPKKATM+PEEGC + FGGA CKVAMGP P       +  DG  +YD DTQ+ G  DL   +E +G  AAG     D   GG    TEPL   +EEG K + E    +A  +A   G  A G+  R+    EE    G   DGG K
Sbjct:   43 GETTVGRNEDQDITVADPSVSGAHAVIEVLEVPGGGGKRLTVKDLRSTNGTYIIDTETGDKKRLAPKKATMLPEEGCRIQFGGAACKVAMGPLPEPGALSEEEKDG--VYDNDTQIAGVIDLGNDEEAEGKAAAGAGAREDAAAGGKKSDTEPLPGAEEEG-KSEAEAGTPLAGTDASEPGRGAGGDRSRQDQGVEETKGEGCGSDGGAK 249          
BLAST of mRNA_M-pyrifera_M_contig7359.17437.1 vs. uniprot
Match: A0A6H5LJ12_9PHAE (BRCT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJ12_9PHAE)

HSP 1 Score: 160 bits (405), Expect = 7.100e-36
Identity = 314/758 (41.42%), Postives = 361/758 (47.63%), Query Frame = 0
Query:   44 DLRSTNGTYIIDAETGSKTRLAPKKATMIPEEGCLVHFGGAICKVAMGP-PARDPCDSDGGDGNNIYDMDTQLPGA-DLDELDEGQGGVAAGDKDKGGGTEPLATVDEEGSKPDVEPVVG--------------VADVEAEGGGSAADGEDKRETLVHEEALPGGVVEDGGEKPR----VRFEGVLFEGVDSSDGGGAGVSAKEEDGGYEPPTQAMVYEL-DDSSDNDQEV----------------------------------VNAND-GTGQDD--AGVPTGPXXXXXXXXXXXVAAAASDTATAATGDXXXXXGAADGAVAVGQTAGRADNGDETADEGDTASLFNKEDDDXXGTDTDEDEAERTIGHEDGDHDXXXXXXXXXXXXXXXXXXXXXXXXDNAKA----DVNSNGKDNVAKAVATAETSAAAGSDREGAASNSALSQGLTPTQMTPSTAPEYLARASQAVSPGNASEVSTLRQESPRTTPRRGGREREGRGXXXXXXXXXXXXXXXXXXRGEGGGQRLFAESPGEGNAAAXXXXXXXXXXXXXXX------SDASGALIPAQD-LVGFGDEDDPLLAGSSPDDKDLGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEVDTDDGPTGDARPAS-PDPNSVY--ASAAETTQ------------DGAXXXXXXXVAPSSRSPDRGTGRHLASR--KVGDTGDESAALGEARSPGGSVLLRTSTEDAMQAIARDQQRADA 715
            DLRS NGTYIID ETG KTRLAPKKATM+PEEGC +HFGGA CKVAMGP P       +  DG  +YD DTQ+PG  DL + +E +G   AG      G E  A  D  G K D EP+ G              +A  +A   G  A  +  R+    EE    G   DGG KPR    VRFE    E   +  GGG  VS    D   E PTQAM  EL DDS DND                                      NA + G  QDD  A VP  P                +   TAA+       G AD  V        AD   +TADEGD A LF K D++  G         R  G               XXXXXXXXXXXX    D A A    D    G D      A    +A     R    S +A   GL+ T MTPST P+   R+    SPGN S+VST RQESPR  P RGG       XXXXXXXXXXXXXXXXXX                     XXXXXXXXXXXXXXX      S+ SGAL+PA+D L GF  EDD L AG++   +  G XXXXXXXXXXXXXXXXXXXXXXXXXX          TEVDTD+GP    R  + PDP +V   ASA   T+            +G           +S   D   G   AS+  + G  G +  A  +ARSPGGS+L R STED+M AIAR+  R++A
Sbjct:    2 DLRSPNGTYIIDTETGDKTRLAPKKATMLPEEGCRIHFGGAACKVAMGPLPEPGALAEEEKDG--VYDNDTQIPGVIDLGDDEEEEGKAEAG-----AGAEEDAAAD--GKKSDTEPLSGAEXXXXXXXEAGIPLAGTDASEPGRGAGVDRSRQDQGVEETKGEGCASDGGAKPRSPSRVRFE----EAPANLSGGGGAVSGGTGDDDAEQPTQAMALELLDDSGDNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGANAEEAGNSQDDGDAAVPADPRG--------------ATEETAASAAPPGDGGGADAEVVPTDPPAHADTDGDTADEGDAALLFEKSDEEGDGN-----VKARAAGAAAAAGPAGEENSGDXXXXXXXXXXXXDDDADGAMAKAVTDAGGGGSDXXXXXXACLPAAA----PRSPGPSATA---GLSGTPMTPSTLPDITGRS--VTSPGNVSDVSTQRQESPRA-PLRGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSEVSGALLPAEDDLDGF--EDDLLDAGAAEPAETGGDXXXXXXXXXXXXXXXXXXXXXXXXXXTDA-------TEVDTDEGPLAAGRTENVPDPPAVEENASAGGGTRSSSAMGAPPEPAEGTTVSSGGASPGASSGSDANAGGVDASKGERQGRRGQQPPAQEDARSPGGSLLRRVSTEDSMMAIAREHARSEA 708          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7359.17437.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G2Z1_ECTSI2.920e-4253.81Chain A, Crystal Structure Of The Brct Repeat Regi... [more]
A0A6H5LJ12_9PHAE7.100e-3641.42BRCT domain-containing protein n=1 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 736..756
NoneNo IPR availableGENE3D2.60.200.20coord: 1..90
e-value: 2.1E-13
score: 51.9
IPR000253Forkhead-associated (FHA) domainSMARTSM00240FHA_2coord: 2..58
e-value: 1.5E-7
score: 41.0
IPR000253Forkhead-associated (FHA) domainPFAMPF00498FHAcoord: 3..64
e-value: 5.8E-11
score: 42.6
IPR000253Forkhead-associated (FHA) domainPROSITEPS50006FHA_DOMAINcoord: 3..58
score: 12.03
IPR008984SMAD/FHA domain superfamilySUPERFAMILY49879SMAD/FHA domaincoord: 3..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7359contigM-pyrifera_M_contig7359:1239..12881 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7359.17437.1mRNA_M-pyrifera_M_contig7359.17437.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig7359 1239..12881 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig7359.17437.1 ID=prot_M-pyrifera_M_contig7359.17437.1|Name=mRNA_M-pyrifera_M_contig7359.17437.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=1305bp
GETTVGRNDDEDITISDPSVSGRHASIDIVELPGDGGKRVTVKDLRSTNG
TYIIDAETGSKTRLAPKKATMIPEEGCLVHFGGAICKVAMGPPARDPCDS
DGGDGNNIYDMDTQLPGADLDELDEGQGGVAAGDKDKGGGTEPLATVDEE
GSKPDVEPVVGVADVEAEGGGSAADGEDKRETLVHEEALPGGVVEDGGEK
PRVRFEGVLFEGVDSSDGGGAGVSAKEEDGGYEPPTQAMVYELDDSSDND
QEVVNANDGTGQDDAGVPTGPPSPPPSPTGAAVAAAASDTATAATGDTAT
AAGAADGAVAVGQTAGRADNGDETADEGDTASLFNKEDDDDEGTDTDEDE
AERTIGHEDGDHDNDTADEGETALLFDNDKEDTDGKDDNAKADVNSNGKD
NVAKAVATAETSAAAGSDREGAASNSALSQGLTPTQMTPSTAPEYLARAS
QAVSPGNASEVSTLRQESPRTTPRRGGREREGRGGGGGGEGGRGGRGGGG
AGRGEGGGQRLFAESPGEGNAAAGDDDDDDDDGEDDEESDASGALIPAQD
LVGFGDEDDPLLAGSSPDDKDLGSGSGNGESSSSVTVAPAAAAAASAAAE
AGDSGSDTDATEVDTDDGPTGDARPASPDPNSVYASAAETTQDGAAAAAA
AAVAPSSRSPDRGTGRHLASRKVGDTGDESAALGEARSPGGSVLLRTSTE
DAMQAIARDQQRADAARLAALAARDGAGALACAPEKGEEEEEKEEEEKEE
KRGEERGLENGDSEGDGGESAVEDEEGGGVAAGGGKQAGAGGERGVDGRN
DDNEEKAKEKGQREEDKRDEGTEEEKEKGQEVGGEEKGSGGEKEDKEKEQ
GGDEEEGKEGGEQWRQADKNADRRVQIPSPASPRVSGRRRVRPKAFDEDD
TEQHKKEAKEKPVAADPVALPTKGRRKTRGTTHEPPAANTGQPRGPPEAP
ETPQPRRTRGRATRGSEVRPPAPDPSPARRDRGDGKKAATNSVETTGDRP
VRSGKRLRSQASPETARGSRKEGAEGGGGSKAGVNAGERSPPPGRVVKRE
EEAVVDLRVGPRASRGTGRGRGHPRQEAGQGRGKVTVGRKRRRADEEEEE
DEEEGEEEDSGGVEKVATAGAGRGKRGVGVTPGKGKGKGKGSRKGKKEED
DASLRTAMEEEEEEEAMDDPVEDSEAAPSSPRASGRRRKAAEDKNKGPAE
PGRGRAATPSAEDKGLPQTPPRASGRGKGSSSPRPLGTDVPIASAAAVGT
VGRTGSAGCTSGGGDDGSLSEGDVKVCFTNVKVTAKERTCLKKLGVSEVR
YALRA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000253FHA_dom
IPR008984SMAD_FHA_dom_sf