prot_M-pyrifera_M_contig7343.17411.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig7343.17411.1
Unique Nameprot_M-pyrifera_M_contig7343.17411.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length344
Homology
BLAST of mRNA_M-pyrifera_M_contig7343.17411.1 vs. uniprot
Match: D8LN71_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN71_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 4.320e-44
Identity = 215/380 (56.58%), Postives = 231/380 (60.79%), Query Frame = 0
Query:    1 MRDVKKALAEGQSPHEGLHKG-------KGGGKISRRAEETLERAKDCISKELVWKVHFEAAQIEERLASVCAKETAAEKNAXXXXXXXXXXXXXXXXLP---------------------PSLAPAAPLTAF---------STESPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELSTDRGGRGQKGSAFGGGVGDRADRGSDSSEGKVEGVRRGGVVXXXXXXXXXXXXXAVGMVSEAQARDSLLGPCRASYAHAVLTCPHNLRWKVWLAGARMELSAGNCTHAQRLLNRAFQAIPEKSKSHVFLECXXXXXXXXXXXXXXXXLERARVETKSEWK 343
            MRD KKAL EG+SP E   +        +G   +  RA+ET+E+AKDCISKELVWKVHFEAAQIEERLASVCAKE A       XXXXXXXXXXXXXX                       P+  P  P+T           S+ SP                      XXXXXXXXXXXXXXXXXXXXXXXXXX          XXXXXXXXXXXX                                            XXXXXXXXXXXXX   +VSEAQAR+SLLGPCR++YAHAVLTCPHNLRWKVWLAGARMEL+AGNC HAQRLLNRAFQ +PEKSKSHVFLECXXXXXXXXXXXXXXXX  RARVETKSEWK
Sbjct:  278 MRDAKKALVEGKSPFEAYQQRATSDASRRGQMVVCSRAKETVEKAKDCISKELVWKVHFEAAQIEERLASVCAKEIATRSLQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSSGPANVPLTPMTPRELREKLRQPSSPSPAAGRVDLPATSSAAATADPAAVXXXXXXXXXXXXXXXXXXXXXXXXXXLVRSEALPSSXXXXXXXXXXXXXXXXXX-------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVSEAQARNSLLGPCRSAYAHAVLTCPHNLRWKVWLAGARMELAAGNCLHAQRLLNRAFQEVPEKSKSHVFLECXXXXXXXXXXXXXXXXXXRARVETKSEWK 632          
BLAST of mRNA_M-pyrifera_M_contig7343.17411.1 vs. uniprot
Match: A0A6H5KEQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEQ7_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 1.190e-20
Identity = 117/327 (35.78%), Postives = 135/327 (41.28%), Query Frame = 0
Query:    1 MRDVKKALAEGQSPHEGLH---------KGKGGGK---------ISRRAEETLERAKDCISKELVWKVHFEAAQIEERLASVCAKETAAE----------KNAXXXXXXXXXXXXXXXXLP--------PSLAPAAPLTAFSTESPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELSTDRGGRGQKGSAFGGGVGDRADRGSDSSEGKVEGVRRGGVVXXXXXXXXXXXXXAVGMVSEAQARDSLLGPCRASYAHAVLTCPHNLRWKVWLAGARMELSAGNCTHA 291
            MRD KKALAEG+SP E            +G+GG           +  RA+ET+E+AKDCISKELVWKVHFEAAQIEERLASVCAK  A            K A  XXXXXXXXXXXXXX          P+  P+ P+T                                           XXX                                                 G+GD              G   GGV               +  VSEAQARDSLLGPCR++YAHAVLTCPHNLRWKV+L    +E+ A +   A
Sbjct:  444 MRDAKKALAEGKSPFEAYQQRATSDPSTRGQGGXXXXXXXXKVVVCSRAKETVEKAKDCISKELVWKVHFEAAQIEERLASVCAKAIATRSLQAAVAAGAKRAPTXXXXXXXXXXXXXXXXXXXXXSSGPANVPSTPMTPRELREKLRQPPSPSPMAGRVDRSPTSSADAAADPAGVPLAAAXXXTIGGGSGGVVEVGCEAETRIDLVRSEALPSSSAGQTAXXXXXXXXXXSKGLGD-------------SGAEAGGVAVAHVDDGGGGSGGDI--VSEAQARDSLLGPCRSAYAHAVLTCPHNLRWKVFLESVLLEIRANDWQRA 755          
BLAST of mRNA_M-pyrifera_M_contig7343.17411.1 vs. uniprot
Match: W7TFT0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TFT0_9STRA)

HSP 1 Score: 101 bits (252), Expect = 7.260e-20
Identity = 57/96 (59.38%), Postives = 64/96 (66.67%), Query Frame = 0
Query:  248 RDSLLGPCRASYAHAVLTCPHNLRWKVWLAGARMELSAGNCTHAQRLLNRAFQAIPEKSKSHVFLECXXXXXXXXXXXXXXXXLERARVETKSEWK 343
            R  LLG CR  Y  A LT P NLRWKVWLAGAR EL AG    A+ LL RAF+ +P+KSK+HVFLEC        XXXXXX  L +ARVE + EWK
Sbjct:  929 RGELLGRCRQYYVDAALTAPSNLRWKVWLAGARTELGAGRVDVARALLRRAFREVPDKSKAHVFLECARLEEYVGXXXXXXSVLAQARVEARGEWK 1024          
BLAST of mRNA_M-pyrifera_M_contig7343.17411.1 vs. uniprot
Match: A0A4D9D155_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D155_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 1.420e-14
Identity = 61/96 (63.54%), Postives = 66/96 (68.75%), Query Frame = 0
Query:  248 RDSLLGPCRASYAHAVLTCPHNLRWKVWLAGARMELSAGNCTHAQRLLNRAFQAIPEKSKSHVFLECXXXXXXXXXXXXXXXXLERARVETKSEWK 343
            R  LLG CR  Y  A LT P NLRWKVWLAGAR EL AG    A+ LL RAF  +P+KSK+H     XXXXXXXXXXXXXXXX   ARVE + EWK
Sbjct: 1279 RGELLGRCRQCYVDAALTAPSNLRWKVWLAGARTELGAGRVDFARALLRRAFCEVPDKSKAHXXXXXXXXXXXXXXXXXXXXXXXXARVEARGEWK 1374          
BLAST of mRNA_M-pyrifera_M_contig7343.17411.1 vs. uniprot
Match: A0A7S0PWJ1_9STRA (Hypothetical protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0PWJ1_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 7.930e-14
Identity = 41/89 (46.07%), Postives = 49/89 (55.06%), Query Frame = 0
Query:  255 CRASYAHAVLTCPHNLRWKVWLAGARMELSAGNCTHAQRLLNRAFQAIPEKSKSHVFLECXXXXXXXXXXXXXXXXLERARVETKSEWK 343
            CR  +    LTCP NL WKVWLAG RMELSAGN   A++L  RA   +PEK K+ V +EC                L +AR E  S+WK
Sbjct:  983 CRERFGMTALTCPPNLCWKVWLAGGRMELSAGNTEQARKLFLRAHNVVPEKGKAAVVMECARLEEFVGETEVARAVLRKARSEVGSDWK 1071          
BLAST of mRNA_M-pyrifera_M_contig7343.17411.1 vs. uniprot
Match: A0A7S0GLS1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GLS1_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 4.120e-13
Identity = 39/92 (42.39%), Postives = 53/92 (57.61%), Query Frame = 0
Query:  252 LGPCRASYAHAVLTCPHNLRWKVWLAGARMELSAGNCTHAQRLLNRAFQAIPEKSKSHVFLECXXXXXXXXXXXXXXXXLERARVETKSEWK 343
            L  CR S+  A+L+CP NL WKVWLA  RMEL+AG  + A++L  RA+  +P+K +S V LEC                L +AR +  S+WK
Sbjct:  200 LQSCRRSFVRAILSCPPNLCWKVWLASGRMELTAGRTSIARKLFMRAYNVVPDKGRSTVLLECARLEEFVDDVKLARAILCKARNDNDSDWK 291          
BLAST of mRNA_M-pyrifera_M_contig7343.17411.1 vs. uniprot
Match: A0A1Z5KBR2_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBR2_FISSO)

HSP 1 Score: 73.2 bits (178), Expect = 2.080e-10
Identity = 40/102 (39.22%), Postives = 51/102 (50.00%), Query Frame = 0
Query:  242 VSEAQARDSLLGPCRASYAHAVLTCPHNLRWKVWLAGARMELSAGNCTHAQRLLNRAFQAIPEKSKSHVFLECXXXXXXXXXXXXXXXXLERARVETKSEWK 343
            V + Q  D LL P R   +  +LTCP NLRW+VWLA AR EL  G    A++L  +A  A+PEK +S   LEC                L + R E   +WK
Sbjct:  946 VDDPQFND-LLDPARRRLSLTILTCPSNLRWRVWLAAARSELGFGQNERARKLFLKAHNAVPEKGRSSTLLECARLEEFLGDTDLARAILCKGRSEYAHDWK 1046          
BLAST of mRNA_M-pyrifera_M_contig7343.17411.1 vs. uniprot
Match: B8C4M3_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C4M3_THAPS)

HSP 1 Score: 72.4 bits (176), Expect = 3.810e-10
Identity = 48/93 (51.61%), Postives = 59/93 (63.44%), Query Frame = 0
Query:  252 LGPCRASYAHAVLTCPHNLRWKVWLAGARMELSAGNCTHAQRLLNRAFQAIPEKSKSHVFLECXXXXXXXXXXXXXXXXLERAR-VETKSEWK 343
            LGP R SYA A++ CP NL WK+WLA  R E + GN   A+ L  RA  ++ EK +S V LEC    XXXXXXXXXX  L +AR +   S+WK
Sbjct: 1196 LGPTRRSYAKAIMMCPQNLTWKIWLASGRTESACGNTDEARSLFLRASDSVSEKGRSTVLLECARLEXXXXXXXXXXAILCKARNIFGNSDWK 1288          
BLAST of mRNA_M-pyrifera_M_contig7343.17411.1 vs. uniprot
Match: A0A1Z5JMR3_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JMR3_FISSO)

HSP 1 Score: 72.0 bits (175), Expect = 4.950e-10
Identity = 38/102 (37.25%), Postives = 51/102 (50.00%), Query Frame = 0
Query:  242 VSEAQARDSLLGPCRASYAHAVLTCPHNLRWKVWLAGARMELSAGNCTHAQRLLNRAFQAIPEKSKSHVFLECXXXXXXXXXXXXXXXXLERARVETKSEWK 343
            V + Q  D +L P R   +  +LTCP NLRW+VWLA AR EL  G    A++L  +A  ++PEK +S   LEC                L + R E   +WK
Sbjct:  947 VDDPQFND-MLNPARRRLSLTILTCPSNLRWRVWLAAARSELGFGQNDRARKLFLKAHNSVPEKGRSSTLLECARLEEFLGDTELARAILCKGRCEYAHDWK 1047          
BLAST of mRNA_M-pyrifera_M_contig7343.17411.1 vs. uniprot
Match: A0A7S2Y4L6_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y4L6_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 7.320e-10
Identity = 39/94 (41.49%), Postives = 45/94 (47.87%), Query Frame = 0
Query:  250 SLLGPCRASYAHAVLTCPHNLRWKVWLAGARMELSAGNCTHAQRLLNRAFQAIPEKSKSHVFLECXXXXXXXXXXXXXXXXLERARVETKSEWK 343
            S L P R      +LTCP NLRWKVWLA  RMEL  GN   A  L  RA   + +KSKS   L+C                L +AR    S+WK
Sbjct:  281 SYLTPVRRRLVLTILTCPQNLRWKVWLAAGRMELVVGNSEMAHSLFQRAHFCVQQKSKSATLLDCARLAEFNGDIKLARGILTKARSFYCSDWK 374          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7343.17411.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D8LN71_ECTSI4.320e-4456.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KEQ7_9PHAE1.190e-2035.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7TFT0_9STRA7.260e-2059.38Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A4D9D155_9STRA1.420e-1463.54Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S0PWJ1_9STRA7.930e-1446.07Hypothetical protein n=1 Tax=Asterionellopsis glac... [more]
A0A7S0GLS1_9STRA4.120e-1342.39Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]
A0A1Z5KBR2_FISSO2.080e-1039.22Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
B8C4M3_THAPS3.810e-1051.61Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A1Z5JMR3_FISSO4.950e-1037.25Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A7S2Y4L6_9STRA7.320e-1041.49Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 317..337
NoneNo IPR availablePANTHERPTHR11246PRE-MRNA SPLICING FACTORcoord: 255..343
NoneNo IPR availablePANTHERPTHR11246:SF20TPR-CONTAINING PROTEIN DDB_G0280363coord: 255..343
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 242..344
e-value: 4.7E-9
score: 37.8
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 255..336

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7343contigM-pyrifera_M_contig7343:531..4838 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7343.17411.1mRNA_M-pyrifera_M_contig7343.17411.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig7343 525..4838 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig7343.17411.1 ID=prot_M-pyrifera_M_contig7343.17411.1|Name=mRNA_M-pyrifera_M_contig7343.17411.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=344bp
MRDVKKALAEGQSPHEGLHKGKGGGKISRRAEETLERAKDCISKELVWKV
HFEAAQIEERLASVCAKETAAEKNAAAAAAAAKNTTTPPPPLPPSLAPAA
PLTAFSTESPTIPSTPSTSNASSHTTGDTSHPSPASTVASNASAATSTES
STTTSTEASSLRLTPSTAGGAGSGGGGGCSELSTDRGGRGQKGSAFGGGV
GDRADRGSDSSEGKVEGVRRGGVVGGDGGGSGGGNGGAVGMVSEAQARDS
LLGPCRASYAHAVLTCPHNLRWKVWLAGARMELSAGNCTHAQRLLNRAFQ
AIPEKSKSHVFLECARLEEFTGNLDCARQILERARVETKSEWKA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf