prot_M-pyrifera_M_contig72715.17274.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig72715.17274.1
Unique Nameprot_M-pyrifera_M_contig72715.17274.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length149
Homology
BLAST of mRNA_M-pyrifera_M_contig72715.17274.1 vs. uniprot
Match: A0A0L0DQI3_THETB (Fibronectin type-III domain-containing protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DQI3_THETB)

HSP 1 Score: 61.2 bits (147), Expect = 4.440e-8
Identity = 53/159 (33.33%), Postives = 74/159 (46.54%), Query Frame = 0
Query:    1 CAPCPTGGVC-GGLAEEGVTAQDGYWRVPWTKDGVGFVACTEAIHCTGHEGCAPGRAGVMCEQCAINYYPS--AGACVPCGPRDLVITRFFFLALFVAVVLSILL------IRAWRSRL----SSSSREVIIS-KIILTHLQTVTVVGAVQLQWPKTAS 145
            C PCP GG C GGLA     A  GY+ V    DG     C  A  C    GCA G +GV+C +CA  YY +   G CV C P+         LA+ +   L +L       +  W        +S +R+V  S  + L  LQ + V+ ++ L+WP++ S
Sbjct:  427 CEPCPPGGECSGGLARP--RAVPGYFDV--NGDGTVLAKCPRATACLAGGGCAVGYSGVLCSECADEYYVNLATGGCVRC-PKSSAAVFGSALAVLILGTLGVLAGIFHLAVFPWEVTAEGVSTSRARKVPHSISVGLVFLQILGVLSSIPLRWPESVS 580          
BLAST of mRNA_M-pyrifera_M_contig72715.17274.1 vs. uniprot
Match: A0A8J8NI59_HALGN (Uncharacterized protein n=1 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8NI59_HALGN)

HSP 1 Score: 58.2 bits (139), Expect = 4.190e-7
Identity = 43/157 (27.39%), Postives = 67/157 (42.68%), Query Frame = 0
Query:    1 CAPCPT--GGVCGGLAEEGVTAQDGYWRVPWTKDGVGFVACTEAIHCTGHEG-----CAPGRAGVMCEQCAINYYPSAGA--CVPCGPRDLVITRFFFLALFVAVVLSILLIRAWRSRLSSSSREVIISKIILTHLQTVTVVGAVQLQWPKTASGFF 148
            C  CP+      GG A   +  + GYWR     D   F+ C   I C G        C  G  G++   CA+ Y  S  +  C  C  R   I     + + VA+ L++L++    S L   +   +  +++L HLQ +T+ G+  L WP     F+
Sbjct:   56 CRKCPSLEAECFGGSA---IFPKSGYWRSSNESDN--FIKCLNPIACLGGSNSNASQCQEGYQGILFSDCALGYSKSLASFKCSNCPSRASNIIILIVVIIGVALFLTLLIVSNLNSALKDKNYLAVFLRVLLNHLQVLTLSGSFDLNWPSMLLSFY 207          
BLAST of mRNA_M-pyrifera_M_contig72715.17274.1 vs. uniprot
Match: J9IXA4_9SPIT (VSP domain containing protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9IXA4_9SPIT)

HSP 1 Score: 56.6 bits (135), Expect = 1.940e-6
Identity = 47/158 (29.75%), Postives = 67/158 (42.41%), Query Frame = 0
Query:    1 CAPCPTG-GVCGGLAEEGVTAQDGYWRVPWTKDGVGFVACTEAIHCTGH--------EGCAPGRAGVMCEQCAINYYPSAG-ACVPCGPRDLVITRFFFLALFVAVVLSILLIRAWRSRLSSSSREVIISKIILTHLQTVTVVGAVQLQWPKTASGFF 148
            C  CP    +C G +  G   Q GYWR     D   F+ C E   C G           C  G  G MC  C   Y  S   AC  C    + I R   + + V +V+S L+     S    ++  V  SKI++ HLQ +++  A + +WP+  + FF
Sbjct: 3814 CKVCPAEKAICQGGSNIG--PQPGYWRKNNETDN--FIECFEKTSCLGMLPPANNPVGDCLEGYYGAMCTACMPGYSRSGDYACSKCPDPFINILRISGIMVIVIIVVSYLVKSTINSATKKNTHSVY-SKILMNHLQLLSICAAFKFEWPEQVTSFF 3966          
BLAST of mRNA_M-pyrifera_M_contig72715.17274.1 vs. uniprot
Match: A0A8J8P9N1_HALGN (Uncharacterized protein n=1 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8P9N1_HALGN)

HSP 1 Score: 56.2 bits (134), Expect = 2.590e-6
Identity = 48/155 (30.97%), Postives = 67/155 (43.23%), Query Frame = 0
Query:    9 VCGGLAEEGVTAQDGYWRVPWTKDGVGFVACTEAIHCTGHE---------GCAPGRAGVMCEQCAINYYPSAG--ACVPCGPRDLVITRFFFLALFVAVVLSILLIRAWRSRLSSSSREV----IISKIILTHLQTVTVVGAVQLQWPKTASGFF 148
            VC G  E  V A  GYWR     D   F  C     C G+E          CAPG  GV+C  C   Y  S G   C+ C  +    +  F L  F+ + +        RS L SS+++     +  +I++ HLQ VT++G+    WP+    FF
Sbjct: 1790 VCKGGNE--VYALSGYWRSSRQSDE--FYQCLYPQACIGYEDGMASSKIEACAPGYQGVLCAGCESGYSLSQGNRKCLKCPSKT---SNAFILTAFL-IAIXXXXXXXXRSNLRSSTKDKNYLPVFFRILVNHLQIVTLLGSFDFDWPQEFVTFF 1936          
BLAST of mRNA_M-pyrifera_M_contig72715.17274.1 vs. uniprot
Match: A0A8J8P946_HALGN (Uncharacterized protein n=1 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8P946_HALGN)

HSP 1 Score: 53.1 bits (126), Expect = 3.040e-5
Identity = 39/135 (28.89%), Postives = 54/135 (40.00%), Query Frame = 0
Query:   21 QDGYWRVPWTKDGVGFVACTEAIHCTGH-----EGCAPGRAGVMCEQCAINYYPSAGA--CVPCGPRDLVITRFFFLALFVAVVLSILLIRAWRSRLSSSSREVIISKIILTHLQTVTVVGAVQLQWPKTASGFF 148
            Q GYWR     D   F+ C   I C G      + C  G  GV+C  CA  Y  S  +  C  C   +  I           + L IL+I    S L   +   +  +++L HLQ +T+ G   L WP     F+
Sbjct: 2133 QAGYWRSSNYSDQ--FIKCLNPIACVGKNIDIKQQCLEGYQGVLCSDCAQGYSKSVASFKCSECPSMESNIIIIAAXXXXXGLFLIILIISNLNSALKEKNYLPVFLRVLLNHLQILTLSGTFDLNWPTPLLNFY 2265          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig72715.17274.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0L0DQI3_THETB4.440e-833.33Fibronectin type-III domain-containing protein n=1... [more]
A0A8J8NI59_HALGN4.190e-727.39Uncharacterized protein n=1 Tax=Halteria grandinel... [more]
J9IXA4_9SPIT1.940e-629.75VSP domain containing protein n=1 Tax=Oxytricha tr... [more]
A0A8J8P9N1_HALGN2.590e-630.97Uncharacterized protein n=1 Tax=Halteria grandinel... [more]
A0A8J8P946_HALGN3.040e-528.89Uncharacterized protein n=1 Tax=Halteria grandinel... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11319G PROTEIN-COUPLED RECEPTOR-RELATEDcoord: 18..148
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 87..106
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 118..140
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 141..149
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 107..117
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..86
NoneNo IPR availableTMHMMTMhelixcoord: 117..139
NoneNo IPR availableTMHMMTMhelixcoord: 82..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig72715contigM-pyrifera_M_contig72715:518..1099 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig72715.17274.1mRNA_M-pyrifera_M_contig72715.17274.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig72715 518..1099 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig72715.17274.1 ID=prot_M-pyrifera_M_contig72715.17274.1|Name=mRNA_M-pyrifera_M_contig72715.17274.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=149bp
CAPCPTGGVCGGLAEEGVTAQDGYWRVPWTKDGVGFVACTEAIHCTGHEG
CAPGRAGVMCEQCAINYYPSAGACVPCGPRDLVITRFFFLALFVAVVLSI
LLIRAWRSRLSSSSREVIISKIILTHLQTVTVVGAVQLQWPKTASGFFT
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