prot_M-pyrifera_M_contig72268.17185.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig72268.17185.1
Unique Nameprot_M-pyrifera_M_contig72268.17185.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length187
Homology
BLAST of mRNA_M-pyrifera_M_contig72268.17185.1 vs. uniprot
Match: A0A7K1ZEG9_9ACTN (Uncharacterized protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1ZEG9_9ACTN)

HSP 1 Score: 136 bits (343), Expect = 2.220e-34
Identity = 94/188 (50.00%), Postives = 122/188 (64.89%), Query Frame = 0
Query:    1 VTDTLGLHLSSDGIAAVRVDAAAGTAPTVIGLGADGPLAVCAVGRDDSGAVVVG-AAAVGLDGTVVVDPLERAANGQIGALAAVINHVVGRAAAATGSAPRRLAVVVPDDWAAPQRDRIVEAGAAAGLAQTVTVPASAASASMSASDLAGGSSDTGEGALIALAGGAASAASLAAAPLVTREDLGETV 187
            +TDTLG+H+S   I AVR+DAA+   P V+ LG  G  A   V + + G+V+VG  AA+  +G  V +PL+RAA G+IGALAAV+  V+ RA AA G  P RLAV+V DDW    RDRIV+AG A+G+A T+ VP SAA+A  +A         TG     ALA GAA A SL++A  VTREDLG+ +
Sbjct:    1 MTDTLGVHISDSRITAVRLDAASVDPPRVVVLGDSGVAAAAVVAQGEGGSVLVGDEAALVTEGPRVTNPLQRAATGRIGALAAVLGFVIRRATAAEGKTPVRLAVIVDDDWEGAARDRIVQAGVASGMADTIVVPRSAAAAQPTAV--------TGPA---ALAAGAARAGSLSSAHFVTREDLGQPI 177          
BLAST of mRNA_M-pyrifera_M_contig72268.17185.1 vs. uniprot
Match: A0A2D8GG88_9ACTN (Uncharacterized protein n=3 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8GG88_9ACTN)

HSP 1 Score: 110 bits (275), Expect = 6.010e-25
Identity = 93/192 (48.44%), Postives = 111/192 (57.81%), Query Frame = 0
Query:    1 VTDTLGLHLSSDGIAAVRVDAAAGTAPT---VIGLGADGPLAVCAVGRDDSGAVVVGAAAVGLDGTVVVDPLERAANGQIGALAAVINHVVGRAA-AATGSAPRRLAVVVPDDWAAPQRDRIVEAGAAAGLAQTVTVPASAASASMSASDLAGGSSDTGEGALIALAGGAASAASL-AAAPLVTREDLGETV 187
            +T  LG+H+S D I A    A  G+ P    V+ LG  GP    AV     GAV+VG AAV     +V DPL RAA G+ GAL AVI HV+GRAA ++T SAP +LAVVVPDD  A +RD IV A  AAG      VPAS A       +L G  +D  EG  + LA GAA    + A  PLVTREDLG+ V
Sbjct:    1 MTACLGIHISDDSIGA----AVCGSNPDDVRVVPLGTSGPAVPAAVAAGVDGAVLVGEAAVDAAEPIVRDPLARAARGRTGALTAVITHVLGRAAVSSTASAPTKLAVVVPDDADAVERDNIVAAANAAGFTDVALVPASLA-------ELRG--TDVSEG--VGLAAGAARIGMVDAPPPLVTREDLGQVV 177          
BLAST of mRNA_M-pyrifera_M_contig72268.17185.1 vs. uniprot
Match: A0A2D7S028_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D7S028_9ACTN)

HSP 1 Score: 96.3 bits (238), Expect = 6.410e-22
Identity = 70/142 (49.30%), Postives = 84/142 (59.15%), Query Frame = 0
Query:    1 VTDTLGLHLSSDGIAAVRVDAAAGTAPT---VIGLGADGPLAVCAVGRDDSGAVVVGAAAVGLDGTVVVDPLERAANGQIGALAAVINHVVGRAAAATGS-APRRLAVVVPDDWAAPQRDRIVEAGAAAGLAQTVTVPASAA 138
            +T  LG+H+S D I A    A  G+ P    V+ LG  GP    AV     GAV+VG AAV     +V DPL RAA G+ GAL AVI HV+GRAA ++ + AP +LAVVVPDD  A +RD IV A  AAG      VPAS A
Sbjct:    1 MTACLGIHISDDSIGA----AVCGSDPDDVRVVPLGTSGPAVPAAVAAGVDGAVLVGEAAVDAAEPIVRDPLARAARGRTGALTAVITHVLGRAAVSSSAGAPTKLAVVVPDDADAVERDNIVAAANAAGFTDVALVPASLA 138          
BLAST of mRNA_M-pyrifera_M_contig72268.17185.1 vs. uniprot
Match: A0A2E8LE31_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8LE31_9ACTN)

HSP 1 Score: 100 bits (248), Expect = 2.980e-21
Identity = 80/161 (49.69%), Postives = 95/161 (59.01%), Query Frame = 0
Query:   29 VIGLGADGPLAVCAVGRDDSGAVVVGAAAVGLDGTVVVDPLERAANGQIGALAAVINHVVGRAAA-ATGSAPRRLAVVVPDDWAAPQRDRIVEAGAAAGLAQTVTVPASAASASMSASDLAGGSSDTGEGALIALAGGAASAASL-AAAPLVTREDLGETV 187
            V+ LG  GP    AV     GAV+VG AAV     +V DPL RAA G+ GAL AVI HV+G AA  +TG AP +LAVVVPDD+ A +RD IV A  AAG      VPAS A       +L G  +D  EG  + LA GAA    + A  PL+TREDLG+ V
Sbjct:   16 VVPLGTSGPAIPAAVAAGVDGAVLVGEAAVDAAEPIVRDPLARAARGRTGALTAVITHVLGWAAVGSTGDAPTKLAVVVPDDYDAVERDNIVAAANAAGFIDVALVPASLA-------ELRG--TDVSEG--VGLAAGAARIGMVDAPPPLITREDLGQVV 165          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig72268.17185.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A7K1ZEG9_9ACTN2.220e-3450.00Uncharacterized protein n=2 Tax=Acidimicrobiaceae ... [more]
A0A2D8GG88_9ACTN6.010e-2548.44Uncharacterized protein n=3 Tax=Acidimicrobiaceae ... [more]
A0A2D7S028_9ACTN6.410e-2249.30Uncharacterized protein n=1 Tax=Acidimicrobiaceae ... [more]
A0A2E8LE31_9ACTN2.980e-2149.69Uncharacterized protein n=1 Tax=Acidimicrobiaceae ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.420.40coord: 5..156
e-value: 2.9E-6
score: 29.5
NoneNo IPR availableSUPERFAMILY53067Actin-like ATPase domaincoord: 27..140

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig72268contigM-pyrifera_M_contig72268:556..1116 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig72268.17185.1mRNA_M-pyrifera_M_contig72268.17185.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig72268 556..1116 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig72268.17185.1 ID=prot_M-pyrifera_M_contig72268.17185.1|Name=mRNA_M-pyrifera_M_contig72268.17185.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=187bp
VTDTLGLHLSSDGIAAVRVDAAAGTAPTVIGLGADGPLAVCAVGRDDSGA
VVVGAAAVGLDGTVVVDPLERAANGQIGALAAVINHVVGRAAAATGSAPR
RLAVVVPDDWAAPQRDRIVEAGAAAGLAQTVTVPASAASASMSASDLAGG
SSDTGEGALIALAGGAASAASLAAAPLVTREDLGETV
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