prot_M-pyrifera_M_contig72255.17182.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig72255.17182.1
Unique Nameprot_M-pyrifera_M_contig72255.17182.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length118
Homology
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BLAST of mRNA_M-pyrifera_M_contig72255.17182.1 vs. uniprot
Match: L8HD38_ACACA (Calpain large subunit, domain iii domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HD38_ACACA)

HSP 1 Score: 104 bits (259), Expect = 1.320e-23
Identity = 46/120 (38.33%), Postives = 79/120 (65.83%), Query Frame = 0 
Query:    5 SRQTIGLISIPLKGVPFMHSSMTFGVMRSYAWTPVHK------LGGSLRIGLKLTKTPNVTKLDDSWTPKCSGGDLDHNTWIRSPQYFMTVNAESLVAFTLRSQVGAEHSMGFYVLRLKD 118
            +   +G++SIPLK +PF+H SM FG+ + Y + P  K       GG LRIGLKL K  + T+    W  K +GG L+++TW+ +PQY+++V+  S+++  L+S +G E+ +GFY++++ +
Sbjct:   97 TNHAMGVVSIPLKDIPFVHESMAFGLAKYYEFKPTSKDGITSVPGGMLRIGLKLLKQRHPTRKLGEWRGKSAGGCLNNHTWVDNPQYWLSVSVRSIISVNLQSTLGKENQLGFYIIKIAE 216
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig72255.17182.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
L8HD38_ACACA1.320e-2338.33Calpain large subunit, domain iii domain containin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.380coord: 44..118
e-value: 2.2E-5
score: 26.1
IPR036213Calpain large subunit, domain III superfamilySUPERFAMILY49758Calpain large subunit, middle domain (domain III)coord: 57..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig72255contigM-pyrifera_M_contig72255:94..447 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig72255.17182.1mRNA_M-pyrifera_M_contig72255.17182.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig72255 94..465 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig72255.17182.1 ID=prot_M-pyrifera_M_contig72255.17182.1|Name=mRNA_M-pyrifera_M_contig72255.17182.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=118bp
MNFVSRQTIGLISIPLKGVPFMHSSMTFGVMRSYAWTPVHKLGGSLRIGL
KLTKTPNVTKLDDSWTPKCSGGDLDHNTWIRSPQYFMTVNAESLVAFTLR
SQVGAEHSMGFYVLRLKD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036213Calpain_III_sf