prot_M-pyrifera_M_contig71915.17127.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig71915.17127.1
Unique Nameprot_M-pyrifera_M_contig71915.17127.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length47
Homology
BLAST of mRNA_M-pyrifera_M_contig71915.17127.1 vs. uniprot
Match: Q52YI6_9PHAE (NADH-ubiquinone oxidoreductase chain 6 n=1 Tax=Cymathaere triplicata TaxID=309354 RepID=Q52YI6_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 1.420e-13
Identity = 34/47 (72.34%), Postives = 40/47 (85.11%), Query Frame = 0
Query:    1 KFIDILFVGFIGLFVSFCFVSYEEEIKNLFHPVIINKTVNDNLKRFQ 47
            K I++L + ++ L VSF  VSYEEEIKNLFHPVI+NKTVNDNLKRFQ
Sbjct:  115 KLINMLSIVYMSLLVSFSLVSYEEEIKNLFHPVIVNKTVNDNLKRFQ 161          
BLAST of mRNA_M-pyrifera_M_contig71915.17127.1 vs. uniprot
Match: A0A1Z4F5L9_MACPY (NADH-ubiquinone oxidoreductase chain 6 n=5 Tax=Laminariales TaxID=2886 RepID=A0A1Z4F5L9_MACPY)

HSP 1 Score: 70.9 bits (172), Expect = 2.720e-13
Identity = 35/47 (74.47%), Postives = 39/47 (82.98%), Query Frame = 0
Query:    1 KFIDILFVGFIGLFVSFCFVSYEEEIKNLFHPVIINKTVNDNLKRFQ 47
            K ++IL V ++   VSF  VSYEEEIKNLFHPVIINKTVNDNLKRFQ
Sbjct:  115 KLMNILLVVYMSSLVSFSLVSYEEEIKNLFHPVIINKTVNDNLKRFQ 161          
BLAST of mRNA_M-pyrifera_M_contig71915.17127.1 vs. uniprot
Match: Q52YK4_9PHAE (NADH-ubiquinone oxidoreductase chain 6 n=2 Tax=Laminariaceae TaxID=33636 RepID=Q52YK4_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 9.980e-13
Identity = 33/47 (70.21%), Postives = 39/47 (82.98%), Query Frame = 0
Query:    1 KFIDILFVGFIGLFVSFCFVSYEEEIKNLFHPVIINKTVNDNLKRFQ 47
            K ++IL   ++G  VSF  VSYEEEI+N+FHPVIINKTVNDNLKRFQ
Sbjct:  115 KLLNILSTVYMGSLVSFSLVSYEEEIRNIFHPVIINKTVNDNLKRFQ 161          
BLAST of mRNA_M-pyrifera_M_contig71915.17127.1 vs. uniprot
Match: Q52YK0_9PHAE (NADH-ubiquinone oxidoreductase chain 6 n=5 Tax=Ecklonia TaxID=105406 RepID=Q52YK0_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 1.910e-12
Identity = 35/47 (74.47%), Postives = 37/47 (78.72%), Query Frame = 0
Query:    1 KFIDILFVGFIGLFVSFCFVSYEEEIKNLFHPVIINKTVNDNLKRFQ 47
            K I IL   ++   VSF  VSYEEEIKNLFHPVIINKTVNDNLKRFQ
Sbjct:  115 KVITILSTVYMSSMVSFSLVSYEEEIKNLFHPVIINKTVNDNLKRFQ 161          
BLAST of mRNA_M-pyrifera_M_contig71915.17127.1 vs. uniprot
Match: Q52YJ1_SACAN (NADH-ubiquinone oxidoreductase chain 6 n=64 Tax=Laminariales TaxID=2886 RepID=Q52YJ1_SACAN)

HSP 1 Score: 65.5 bits (158), Expect = 2.540e-11
Identity = 31/33 (93.94%), Postives = 31/33 (93.94%), Query Frame = 0
Query:   15 VSFCFVSYEEEIKNLFHPVIINKTVNDNLKRFQ 47
            VSF  VSYEEEIKNLFHPVIINKTVNDNLKRFQ
Sbjct:  129 VSFSLVSYEEEIKNLFHPVIINKTVNDNLKRFQ 161          
BLAST of mRNA_M-pyrifera_M_contig71915.17127.1 vs. uniprot
Match: A0A0U1XT71_9PHAE (NADH-ubiquinone oxidoreductase chain 6 n=6 Tax=Laminariaceae TaxID=33636 RepID=A0A0U1XT71_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 2.540e-11
Identity = 31/33 (93.94%), Postives = 31/33 (93.94%), Query Frame = 0
Query:   15 VSFCFVSYEEEIKNLFHPVIINKTVNDNLKRFQ 47
            VSF  VSYEEEIKNLFHPVIINKTVNDNLKRFQ
Sbjct:  129 VSFSLVSYEEEIKNLFHPVIINKTVNDNLKRFQ 161          
BLAST of mRNA_M-pyrifera_M_contig71915.17127.1 vs. uniprot
Match: Q52YK1_9PHAE (NADH-ubiquinone oxidoreductase chain 6 n=1 Tax=Egregia menziesii TaxID=105409 RepID=Q52YK1_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 6.680e-11
Identity = 29/38 (76.32%), Postives = 33/38 (86.84%), Query Frame = 0
Query:   10 FIGLFVSFCFVSYEEEIKNLFHPVIINKTVNDNLKRFQ 47
            +I   VSF  VSYEE+IKNLFHP+I+NKTVNDNLKRFQ
Sbjct:  124 YISSLVSFSLVSYEEKIKNLFHPIIVNKTVNDNLKRFQ 161          
BLAST of mRNA_M-pyrifera_M_contig71915.17127.1 vs. uniprot
Match: B5BPC3_9PHAE (NADH-ubiquinone oxidoreductase chain 6 n=1 Tax=Aureophycus aleuticus TaxID=461266 RepID=B5BPC3_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 9.220e-11
Identity = 29/47 (61.70%), Postives = 38/47 (80.85%), Query Frame = 0
Query:    1 KFIDILFVGFIGLFVSFCFVSYEEEIKNLFHPVIINKTVNDNLKRFQ 47
            K ++++   ++   VSF  VSYE+EIKNLFHP++INKTVNDNLKRFQ
Sbjct:  115 KLMNLVSTLYMSSLVSFSLVSYEDEIKNLFHPILINKTVNDNLKRFQ 161          
BLAST of mRNA_M-pyrifera_M_contig71915.17127.1 vs. uniprot
Match: D5KSK0_9PHAE (NADH-ubiquinone oxidoreductase chain 6 n=36 Tax=Lessonia TaxID=105411 RepID=D5KSK0_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 2.420e-10
Identity = 30/45 (66.67%), Postives = 36/45 (80.00%), Query Frame = 0
Query:    3 IDILFVGFIGLFVSFCFVSYEEEIKNLFHPVIINKTVNDNLKRFQ 47
            I++L   ++   VSF  VSYEEEIK LFHPVIINKT+N+NLKRFQ
Sbjct:  117 INLLSTIYMSSLVSFSLVSYEEEIKKLFHPVIINKTINENLKRFQ 161          
BLAST of mRNA_M-pyrifera_M_contig71915.17127.1 vs. uniprot
Match: Q52YK6_UNDPI (NADH-ubiquinone oxidoreductase chain 6 n=1 Tax=Undaria pinnatifida TaxID=74381 RepID=Q52YK6_UNDPI)

HSP 1 Score: 62.0 bits (149), Expect = 4.600e-10
Identity = 30/47 (63.83%), Postives = 36/47 (76.60%), Query Frame = 0
Query:    1 KFIDILFVGFIGLFVSFCFVSYEEEIKNLFHPVIINKTVNDNLKRFQ 47
            K + +L   +I   VSF  +SYEEEI+ LFHPVI+NKTVNDNLKRFQ
Sbjct:  115 KLMTMLSTLYISSLVSFNLISYEEEIRKLFHPVILNKTVNDNLKRFQ 161          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig71915.17127.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
Q52YI6_9PHAE1.420e-1372.34NADH-ubiquinone oxidoreductase chain 6 n=1 Tax=Cym... [more]
A0A1Z4F5L9_MACPY2.720e-1374.47NADH-ubiquinone oxidoreductase chain 6 n=5 Tax=Lam... [more]
Q52YK4_9PHAE9.980e-1370.21NADH-ubiquinone oxidoreductase chain 6 n=2 Tax=Lam... [more]
Q52YK0_9PHAE1.910e-1274.47NADH-ubiquinone oxidoreductase chain 6 n=5 Tax=Eck... [more]
Q52YJ1_SACAN2.540e-1193.94NADH-ubiquinone oxidoreductase chain 6 n=64 Tax=La... [more]
A0A0U1XT71_9PHAE2.540e-1193.94NADH-ubiquinone oxidoreductase chain 6 n=6 Tax=Lam... [more]
Q52YK1_9PHAE6.680e-1176.32NADH-ubiquinone oxidoreductase chain 6 n=1 Tax=Egr... [more]
B5BPC3_9PHAE9.220e-1161.70NADH-ubiquinone oxidoreductase chain 6 n=1 Tax=Aur... [more]
D5KSK0_9PHAE2.420e-1066.67NADH-ubiquinone oxidoreductase chain 6 n=36 Tax=Le... [more]
Q52YK6_UNDPI4.600e-1063.83NADH-ubiquinone oxidoreductase chain 6 n=1 Tax=Und... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 23..47
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..22
NoneNo IPR availableTMHMMTMhelixcoord: 5..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig71915contigM-pyrifera_M_contig71915:11..151 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig71915.17127.1mRNA_M-pyrifera_M_contig71915.17127.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig71915 11..151 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig71915.17127.1 ID=prot_M-pyrifera_M_contig71915.17127.1|Name=mRNA_M-pyrifera_M_contig71915.17127.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=47bp
KFIDILFVGFIGLFVSFCFVSYEEEIKNLFHPVIINKTVNDNLKRFQ
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