prot_M-pyrifera_M_contig7189.17120.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig7189.17120.1
Unique Name	prot_M-pyrifera_M_contig7189.17120.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	480

Homology

[Close]

BLAST of mRNA_M-pyrifera_M_contig7189.17120.1 vs. uniprot
Match: A0A6H5JQ54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ54_9PHAE)

HSP 1 Score: 134 bits (338), Expect = 7.950e-31
Identity = 147/226 (65.04%), Postives = 164/226 (72.57%), Query Frame = 0

Query:   15 GLRVVAASGWLPLADALSLQLASLSTCVDCREV-RPVCVSVAKRTPETLWSNETPTSGRGTVEHTIGTTGGDDGSGG--GSRSRVPRPTIVTVVWNRGTPCGALHRDLPSELRRISLGAGFHQSVGDIRWPDGLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG---------DGVRWPSALERITLESYARDLTEV 228
            GLR  AASGWLP AD ++LQLASL+ CV CR   +PV V+VAKRTP+TLWS + P   R   E T     GD GSGG  G  SRVPRPTI  + W R +PC AL   LPSE +R++ G+ F+ ++  IRWP+GLE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           GVRWPS LERI L SY R LT V
Sbjct:   16 GLRAAAASGWLPFADLITLQLASLAMCVICRHAQKPVLVNVAKRTPKTLWSIDRP---RIAHESTDSADEGD-GSGGAPGFASRVPRPTIEAISWIRASPCSALRDKLPSEAKRLTFGSNFNHTLVGIRWPEGLEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHSTDKVKEGGVRWPSTLERIALGSYRRSLTGV 237

[Close]

BLAST of mRNA_M-pyrifera_M_contig7189.17120.1 vs. uniprot
Match: D7FU94_ECTSI (Proline dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU94_ECTSI)

HSP 1 Score: 137 bits (344), Expect = 1.040e-30
Identity = 148/236 (62.71%), Postives = 165/236 (69.92%), Query Frame = 0

Query:    6 DRERWHHRDGLRVVAASGWLPLADALSLQLASLSTCVDCREV-RPVCVSVAKRTPETLWSNETPTSGRGTVEHTIGTTGGDDGSGG--GSRSRVPRPTIVTVVWNRGTPCGALHRDLPSELRRISLGAGFHQSVGDIRWPDGLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG----------DGVRWPSALERITLESYARDLTEV 228
            DR R     GLR  AASGWLP AD ++ QLASL+ CV CR   +PV V+VAKRTP+TLWS + P   R   E T     G+ GSGG  G  SRVPRPTI  + W R +PC AL   LPSE +R++ G+ F+ +V  IRWP+GLE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              GVRWPS LERITL SY R LT V
Sbjct:   16 DRRRCRRDAGLRAAAASGWLPFADLITFQLASLAMCVICRHAQKPVLVNVAKRTPKTLWSIDRP---RIAHESTDSADEGE-GSGGAPGFASRVPRPTIEAISWIRASPCPALRDKLPSEAKRLAFGSNFNHTVVGIRWPEGLEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPVQDSTDKVKEGGVRWPSTLERITLGSYRRSLTGV 247

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig7189.17120.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig7189.17120.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JQ54_9PHAE	7.950e-31	65.04	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FU94_ECTSI	1.040e-30	62.71	Proline dehydrogenase n=1 Tax=Ectocarpus siliculos...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008615	FNIP	PFAM	PF05725	FNIP	coord: 309..351 e-value: 1.4E-4 score: 22.0 coord: 265..306 e-value: 9.7E-11 score: 41.7
None	No IPR available	PANTHER	PTHR32134	UNCHARACTERIZED	coord: 330..436
None	No IPR available	PANTHER	PTHR32134:SF86		coord: 118..204 coord: 330..436
None	No IPR available	PANTHER	PTHR32134:SF86		coord: 173..350
None	No IPR available	PANTHER	PTHR32134	UNCHARACTERIZED	coord: 118..204 coord: 173..350
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..30 score: 0.45
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 178..442

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig7189	contig	M-pyrifera_M_contig7189:2021..3676 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig7189.17120.1	mRNA_M-pyrifera_M_contig7189.17120.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig7189 2021..3676 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig7189.17120.1 ID=prot_M-pyrifera_M_contig7189.17120.1|Name=mRNA_M-pyrifera_M_contig7189.17120.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=480bp
MATAVDRERWHHRDGLRVVAASGWLPLADALSLQLASLSTCVDCREVRPV
CVSVAKRTPETLWSNETPTSGRGTVEHTIGTTGGDDGSGGGSRSRVPRPT
IVTVVWNRGTPCGALHRDLPSELRRISLGAGFHQSVGDIRWPDGLEDITL
ASKFSQPVAGATWPPMLMRIALGGAFNEPLAGVAWPESLKQISLGSRFDQ
PLAGDGVRWPSALERITLESYARDLTEVSWPPGLRALTIAGAFDWPIDGV
KLPDGLEHLTISSVFNRPIDGVVFPPGLKSLKLGNHFNQPIEHAAFPAGL
EELSFGIAFDQRVERIELPARLAHLSFGTSFNYPVQASAWPDGVTELFFG
DAFNQDVSGMSWPASITRLVFGDRFNKPVEGMAWPPALEEVAFGHNFNQP
VVAVVWPKPLRSLRFGARFKQCLSAADWPAALQTLDLSDCHMRWAYGPAE
GYEKWPKDINIIARKSVAGLGWQRGEQSS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008615	FNIP