prot_M-pyrifera_M_contig7182.17110.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig7182.17110.1
Unique Nameprot_M-pyrifera_M_contig7182.17110.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length125
Homology
BLAST of mRNA_M-pyrifera_M_contig7182.17110.1 vs. uniprot
Match: A0A6H5JLG6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLG6_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 6.830e-29
Identity = 57/125 (45.60%), Postives = 80/125 (64.00%), Query Frame = 0
Query:    1 RTAVQAEVATCAPALTPFVTKCYGERTAPVFFQVESGERRKIECSSGVQQGDAMGPALFCMPLLPVLKRTRAEFEPKGVEAFAYLDDISIGMTEITPDTVGVVPFLQRELSNIGIAINPSKTVAL 125
            RTA+ A+ A   P L  ++ +CY E  A   + ++SGERR IEC SGVQQGD MGP LFC  L+P++ + RA+++  GV   AY+DDIS+    IT + + V+P L  EL  +GI +N  K+ AL
Sbjct:  160 RTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVSKVRAKYDHLGVSLKAYVDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSAL 284          
BLAST of mRNA_M-pyrifera_M_contig7182.17110.1 vs. uniprot
Match: A0A6H5KJC0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJC0_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 1.250e-28
Identity = 57/125 (45.60%), Postives = 80/125 (64.00%), Query Frame = 0
Query:    1 RTAVQAEVATCAPALTPFVTKCYGERTAPVFFQVESGERRKIECSSGVQQGDAMGPALFCMPLLPVLKRTRAEFEPKGVEAFAYLDDISIGMTEITPDTVGVVPFLQRELSNIGIAINPSKTVAL 125
            RTA+ A+ A   P L  ++ +CY E  A   + ++SGERR IEC SGVQQGD MGP LFC  L+P++ + RA+++  GV   AY+DDIS+    IT + + V+P L  EL  +GI +N  K+ AL
Sbjct:  547 RTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAEFIQVIPDLVNELEAVGIIVNRGKSSAL 671          
BLAST of mRNA_M-pyrifera_M_contig7182.17110.1 vs. uniprot
Match: A0A6H5JI32_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI32_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 4.390e-28
Identity = 57/125 (45.60%), Postives = 80/125 (64.00%), Query Frame = 0
Query:    1 RTAVQAEVATCAPALTPFVTKCYGERTAPVFFQVESGERRKIECSSGVQQGDAMGPALFCMPLLPVLKRTRAEFEPKGVEAFAYLDDISIGMTEITPDTVGVVPFLQRELSNIGIAINPSKTVAL 125
            RTA+ A+ A   P L  ++ +CY E  A   + ++SGERR IEC SGVQQGD MGP LFC  L+P++ + RA+++  GV   AY+DDIS+    IT + + V+P L  EL  +GI +N  K+ AL
Sbjct:  542 RTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSAL 666          
BLAST of mRNA_M-pyrifera_M_contig7182.17110.1 vs. uniprot
Match: A0A6H5KMQ2_9PHAE (Reverse transcriptase domain-containing protein n=16 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ2_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 4.490e-28
Identity = 57/125 (45.60%), Postives = 80/125 (64.00%), Query Frame = 0
Query:    1 RTAVQAEVATCAPALTPFVTKCYGERTAPVFFQVESGERRKIECSSGVQQGDAMGPALFCMPLLPVLKRTRAEFEPKGVEAFAYLDDISIGMTEITPDTVGVVPFLQRELSNIGIAINPSKTVAL 125
            RTA+ A+ A   P L  ++ +CY E  A   + ++SGERR IEC SGVQQGD MGP LFC  L+P++ + RA+++  GV   AY+DDIS+    IT + + V+P L  EL  +GI +N  K+ AL
Sbjct:  521 RTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSAL 645          
BLAST of mRNA_M-pyrifera_M_contig7182.17110.1 vs. uniprot
Match: A0A6H5KT19_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT19_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 6.870e-28
Identity = 57/125 (45.60%), Postives = 80/125 (64.00%), Query Frame = 0
Query:    1 RTAVQAEVATCAPALTPFVTKCYGERTAPVFFQVESGERRKIECSSGVQQGDAMGPALFCMPLLPVLKRTRAEFEPKGVEAFAYLDDISIGMTEITPDTVGVVPFLQRELSNIGIAINPSKTVAL 125
            RTA+ A+ A   P L   + +CY E  A   + ++SGERR IEC SGVQQGD MGP LFC  L+P++ + RA+++  GV   AY+DDIS+    IT +++ V+P L  EL  +GI +N  K+ AL
Sbjct:  198 RTAIMAQAAKSVPDLVGCIARCY-ELPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAESIQVIPDLVDELEAVGIIVNRGKSSAL 321          
BLAST of mRNA_M-pyrifera_M_contig7182.17110.1 vs. uniprot
Match: A0A6H5KYJ9_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYJ9_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 1.060e-27
Identity = 56/125 (44.80%), Postives = 80/125 (64.00%), Query Frame = 0
Query:    1 RTAVQAEVATCAPALTPFVTKCYGERTAPVFFQVESGERRKIECSSGVQQGDAMGPALFCMPLLPVLKRTRAEFEPKGVEAFAYLDDISIGMTEITPDTVGVVPFLQRELSNIGIAINPSKTVAL 125
            RTA+ A+ A   P L  ++ +CY E  A   + ++SGERR IEC SGVQQGD MGP LFC  L+P++ + RA+++  GV   AY+DDIS+    IT + + V+P +  EL  +GI +N  K+ AL
Sbjct:   68 RTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDVVDELEAVGIIVNRGKSSAL 192          
BLAST of mRNA_M-pyrifera_M_contig7182.17110.1 vs. uniprot
Match: A0A6H5KKQ2_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKQ2_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 1.500e-27
Identity = 56/125 (44.80%), Postives = 80/125 (64.00%), Query Frame = 0
Query:    1 RTAVQAEVATCAPALTPFVTKCYGERTAPVFFQVESGERRKIECSSGVQQGDAMGPALFCMPLLPVLKRTRAEFEPKGVEAFAYLDDISIGMTEITPDTVGVVPFLQRELSNIGIAINPSKTVAL 125
            RTA+ A+ +   P L  ++ +CY E  A   + ++SGERR IEC SGVQQGD MGP LFC  L+P++ + RA+++  GV   AY+DDIS+   +IT + + V P L  EL  +GI +N  K+ AL
Sbjct:  520 RTAIMAQASKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKDITAENIQVTPDLVDELEAVGIIVNRGKSSAL 644          
BLAST of mRNA_M-pyrifera_M_contig7182.17110.1 vs. uniprot
Match: A0A6H5KR59_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR59_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 2.070e-27
Identity = 55/125 (44.00%), Postives = 78/125 (62.40%), Query Frame = 0
Query:    1 RTAVQAEVATCAPALTPFVTKCYGERTAPVFFQVESGERRKIECSSGVQQGDAMGPALFCMPLLPVLKRTRAEFEPKGVEAFAYLDDISIGMTEITPDTVGVVPFLQRELSNIGIAINPSKTVAL 125
            RTA+ A+ A   P L  ++ +CY E  A   + ++SG RR IEC  GVQQGD MGP LFC  L+P++ + RA+++  GV   AY+DDIS+    IT + + V+P L  EL  +GI +N  K+ AL
Sbjct:  243 RTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGARRTIECKGGVQQGDGMGPPLFCFILVPIILKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSAL 367          
BLAST of mRNA_M-pyrifera_M_contig7182.17110.1 vs. uniprot
Match: A0A6H5LL14_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL14_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 2.600e-27
Identity = 57/126 (45.24%), Postives = 80/126 (63.49%), Query Frame = 0
Query:    1 RTAVQAEVATCAPALTPFVTKCYGERTAPVFFQVESGERRKIECSSGVQQGDAMGPALFCMPLLPVLKRTRAEFEPKGVEAFAYLDDI-SIGMTEITPDTVGVVPFLQRELSNIGIAINPSKTVAL 125
            RTA+ A+ A   P L  ++ +CY E  A   + ++SGERR IEC SGVQQGD MGP LFC  L+P++ + RA+++  GV   AY+DDI S+    IT + + V+P L  EL  +GI +N  K+ AL
Sbjct:  152 RTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFTLVPIVLKLRAKYDNLGVRLKAYMDDIISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSAL 277          
BLAST of mRNA_M-pyrifera_M_contig7182.17110.1 vs. uniprot
Match: A0A6H5KDD0_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDD0_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 2.720e-27
Identity = 56/125 (44.80%), Postives = 79/125 (63.20%), Query Frame = 0
Query:    1 RTAVQAEVATCAPALTPFVTKCYGERTAPVFFQVESGERRKIECSSGVQQGDAMGPALFCMPLLPVLKRTRAEFEPKGVEAFAYLDDISIGMTEITPDTVGVVPFLQRELSNIGIAINPSKTVAL 125
            RTA+ A+ A   P L  ++ +CY E +A   + ++SGERR IEC SGVQQGD MGP LF   L P++ + RA+++  GV   AY+DDIS+    IT + + V+P L  EL  +GI +N  K+ AL
Sbjct:  109 RTAIMAKAAKSVPNLVGYIARCYDEISAKSIYAMDSGERRTIECKSGVQQGDGMGPPLFFFILFPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSAL 233          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7182.17110.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JLG6_9PHAE6.830e-2945.60Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KJC0_9PHAE1.250e-2845.60Reverse transcriptase domain-containing protein (F... [more]
A0A6H5JI32_9PHAE4.390e-2845.60Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KMQ2_9PHAE4.490e-2845.60Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KT19_9PHAE6.870e-2845.60Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KYJ9_9PHAE1.060e-2744.80Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KKQ2_9PHAE1.500e-2744.80Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KR59_9PHAE2.070e-2744.00Reverse transcriptase domain-containing protein (F... [more]
A0A6H5LL14_9PHAE2.600e-2745.24Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KDD0_9PHAE2.720e-2744.80Reverse transcriptase domain-containing protein n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 12..124
e-value: 5.1E-13
score: 49.0
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..125
score: 9.327

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7182contigM-pyrifera_M_contig7182:12671..13045 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7182.17110.1mRNA_M-pyrifera_M_contig7182.17110.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig7182 12671..13045 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig7182.17110.1 ID=prot_M-pyrifera_M_contig7182.17110.1|Name=mRNA_M-pyrifera_M_contig7182.17110.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=125bp
RTAVQAEVATCAPALTPFVTKCYGERTAPVFFQVESGERRKIECSSGVQQ
GDAMGPALFCMPLLPVLKRTRAEFEPKGVEAFAYLDDISIGMTEITPDTV
GVVPFLQRELSNIGIAINPSKTVAL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom