prot_M-pyrifera_M_contig71193.16980.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig71193.16980.1
Unique Nameprot_M-pyrifera_M_contig71193.16980.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length287
Homology
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BLAST of mRNA_M-pyrifera_M_contig71193.16980.1 vs. uniprot
Match: J9I8E7_9SPIT (MYND finger family protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9I8E7_9SPIT)

HSP 1 Score: 82.8 bits (203), Expect = 2.940e-14
Identity = 87/323 (26.93%), Postives = 137/323 (42.41%), Query Frame = 0 
Query:    2 VGTLRWPIDHVYGDVP---VEERECVIGPNLGWGKWLGTRLGGRGVGMDGDVIGCVKDERGGWKVHPSVVDGLSWALTAELGLEKVGWTPAWPKEEKGVEGVVTFVLMGGSWNVEQRI---VKYFRELRPWAMGKGIQHLRVVVVGPE-ARSLSPKQVWI----------GGV------KGLGEEWLRGEGCAFQDSPS-STVFMLFNPGFGNTNIALRQAWAPTLVSLLDSNASILIACANDHG-----------DLAGEVPILQSVLHAK--FLLPPTKNPFPAASTFVPEDTRSTPRSEAEKGARWSCANSFFYLIQGYK 287
            VGT RW       ++P    E R  +   N GW  +LG R          + I   + +     + P  +DGLS+++T    + K+     + KE       VT V+MGG+   E+RI     Y+ EL  +         +   VGPE + S + K   +          G +      +G+  E L  +       P  ST F+ +NPGFG+    L  +W   L+ L++ N  +  + AND+            DL GE  + Q +   K  ++L P +NPF AA+ +           E +K   WSC+N+ FY I+G+K
Sbjct:   98 VGTFRWNDSVNLVNIPQFKAEYRVLLKTLNEGWQTYLGLRF---------EEIANEQTQE--INIQPHQLDGLSFSMTLVNLIMKLR---LFLKEN------VTIVVMGGTAKAEERIFVQTNYYEELTNFFPKTSF---KFYFVGPELSNSRNQKSFKVNERLDGFFHKGQISEFLIDQGINPESLENDEIIKSKFPQDSTFFIGYNPGFGSGYDLLLNSWCVDLIQLINLNLPVCFSQANDYSVTNFRVVNDLQDLRGETRVFQVIFEGKVNYVLEPQENPFRAATHY---------HEEGKKETSWSCSNTHFYGIKGWK 388
[Close]
BLAST of mRNA_M-pyrifera_M_contig71193.16980.1 vs. uniprot
Match: J9HNG3_9SPIT (Zinc finger MYND domain-containing protein 17 n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9HNG3_9SPIT)

HSP 1 Score: 72.8 bits (177), Expect = 6.190e-11
Identity = 37/106 (34.91%), Postives = 58/106 (54.72%), Query Frame = 0 
Query:  184 FNPGFGNTNIALRQAWAPTLVSLLDSNASILIACANDHGDLAGEVPILQSVLHAK--FLLPPTKNPFPAASTFVPEDTRSTPRSEAEKGARWSCANSFFYLIQGYK 287
            +NPGFG+    L  +W   L+SL++ N  +  + AND+ DL GE  + Q +   K  ++  P +NPF AA+ +           E +K   WSC+N+ FY I+G+K
Sbjct:  237 YNPGFGSGYDLLLNSWCVDLISLVNLNLPVCFSQANDYSDLRGETRVFQVIFEGKVNYVFEPQENPFRAATHY---------HEEGKKETSWSCSNTHFYGIKGWK 333
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig71193.16980.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
J9I8E7_9SPIT2.940e-1426.93MYND finger family protein n=1 Tax=Oxytricha trifa... [more]
J9HNG3_9SPIT6.190e-1134.91Zinc finger MYND domain-containing protein 17 n=1 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR28069FAMILY NOT NAMEDcoord: 174..285

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig71193contigM-pyrifera_M_contig71193:175..1158 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig71193.16980.1mRNA_M-pyrifera_M_contig71193.16980.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig71193 172..1158 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig71193.16980.1 ID=prot_M-pyrifera_M_contig71193.16980.1|Name=mRNA_M-pyrifera_M_contig71193.16980.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=287bp
MVGTLRWPIDHVYGDVPVEERECVIGPNLGWGKWLGTRLGGRGVGMDGDV
IGCVKDERGGWKVHPSVVDGLSWALTAELGLEKVGWTPAWPKEEKGVEGV
VTFVLMGGSWNVEQRIVKYFRELRPWAMGKGIQHLRVVVVGPEARSLSPK
QVWIGGVKGLGEEWLRGEGCAFQDSPSSTVFMLFNPGFGNTNIALRQAWA
PTLVSLLDSNASILIACANDHGDLAGEVPILQSVLHAKFLLPPTKNPFPA
ASTFVPEDTRSTPRSEAEKGARWSCANSFFYLIQGYK
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