prot_M-pyrifera_M_contig70009.16753.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig70009.16753.1
Unique Nameprot_M-pyrifera_M_contig70009.16753.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length164
Homology
BLAST of mRNA_M-pyrifera_M_contig70009.16753.1 vs. uniprot
Match: M1AYA4_SOLTU (GTP-binding 2 n=79 Tax=Pentapetalae TaxID=1437201 RepID=M1AYA4_SOLTU)

HSP 1 Score: 153 bits (386), Expect = 6.740e-44
Identity = 80/158 (50.63%), Postives = 103/158 (65.19%), Query Frame = 0
Query:    8 LCKVIVVGDTGSGKSAFLTRVTSARFLSEHCVTIGVEFASRTVVLDGKAVKLQIWDTAGQERFRSITRSYYRGAGGVILTVDVTDPDCMAGLGHWISECCKHSANSSLPILLLATKVDGEH--AVSLDTIRQYATKEGLLFTACSSRTGEGVEDAIIQ 163
            L K I++GDTG GKS  L + T  RF   H +TIGVEF +R V +DGK +KLQIWDTAGQE FRSITRSYYRGA G +L  D+T  +    L  W+ +  +H AN ++ I+L+  K D  H  AVS +   Q+A + GLLF   S+RT + VE+A IQ
Sbjct:    6 LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQH-ANPNMTIMLIGNKSDLSHRRAVSKEEGEQFAKENGLLFLEASARTAQSVEEAFIQ 162          
BLAST of mRNA_M-pyrifera_M_contig70009.16753.1 vs. uniprot
Match: A0A6U5LA03_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5LA03_9STRA)

HSP 1 Score: 152 bits (385), Expect = 1.100e-43
Identity = 78/157 (49.68%), Postives = 105/157 (66.88%), Query Frame = 0
Query:    8 LCKVIVVGDTGSGKSAFLTRVTSARFLSEHCVTIGVEFASRTVVLDGKAVKLQIWDTAGQERFRSITRSYYRGAGGVILTVDVTDPDCMAGLGHWISECCKHSANSSLPILLLATKVDGEH--AVSLDTIRQYATKEGLLFTACSSRTGEGVEDAII 162
            L K I++GDTG GKS  L + T  RF   H +TIGVEF +RTV +DG+ VKLQIWDTAGQE FRSITRSYYRGA G +L  DVT  D    +G W+ E  + +A S++ ++L+  K D EH  AV+ +  + +A + GL+F   S++T +GVE A +
Sbjct:    6 LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARTVTVDGRDVKLQIWDTAGQESFRSITRSYYRGAAGALLVYDVTRRDTFEHVGRWLEEA-RQNAQSNMVVMLIGNKNDLEHRRAVTTEEGKAFAEENGLIFAETSAKTADGVEGAFV 161          
BLAST of mRNA_M-pyrifera_M_contig70009.16753.1 vs. uniprot
Match: A0A0V0HLN6_SOLCH (Putative ras-related protein RABB1b-like n=2 Tax=lamiids TaxID=91888 RepID=A0A0V0HLN6_SOLCH)

HSP 1 Score: 152 bits (385), Expect = 1.740e-43
Identity = 80/158 (50.63%), Postives = 103/158 (65.19%), Query Frame = 0
Query:    8 LCKVIVVGDTGSGKSAFLTRVTSARFLSEHCVTIGVEFASRTVVLDGKAVKLQIWDTAGQERFRSITRSYYRGAGGVILTVDVTDPDCMAGLGHWISECCKHSANSSLPILLLATKVDGEH--AVSLDTIRQYATKEGLLFTACSSRTGEGVEDAIIQ 163
            L K I++GDTG GKS  L + T  RF   H +TIGVEF +R V +DGK +KLQIWDTAGQE FRSITRSYYRGA G +L  D+T  +    L  W+ +  +H AN ++ I+L+  K D  H  AVS +   Q+A + GLLF   S+RT + VE+A IQ
Sbjct:    6 LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQH-ANPNMTIMLVGNKSDLSHRRAVSKEEGEQFAKENGLLFLEASARTAQSVEEAFIQ 162          
BLAST of mRNA_M-pyrifera_M_contig70009.16753.1 vs. uniprot
Match: A0A0K9RFG8_SPIOL (Uncharacterized protein n=4 Tax=Chenopodiaceae TaxID=1804623 RepID=A0A0K9RFG8_SPIOL)

HSP 1 Score: 151 bits (382), Expect = 2.710e-43
Identity = 76/158 (48.10%), Postives = 104/158 (65.82%), Query Frame = 0
Query:    8 LCKVIVVGDTGSGKSAFLTRVTSARFLSEHCVTIGVEFASRTVVLDGKAVKLQIWDTAGQERFRSITRSYYRGAGGVILTVDVTDPDCMAGLGHWISECCKHSANSSLPILLLATKVDGEH--AVSLDTIRQYATKEGLLFTACSSRTGEGVEDAIIQ 163
            L K I++GDTG GKS  L + T  RF   H +TIGVEF +R + +D K +KLQIWDTAGQE FRSITRSYYRGA G +L  D+T  +    L  W+ +  +H AN+++ I+L+  K D  H  AVS +   Q+A + GL+F  CS++T + VE+A I+
Sbjct:    6 LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQH-ANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMECSAKTAQNVEEAFIK 162          
BLAST of mRNA_M-pyrifera_M_contig70009.16753.1 vs. uniprot
Match: A0A0M0K455_9EUKA (Rab family gtpase n=4 Tax=Prymnesiophyceae TaxID=2608131 RepID=A0A0M0K455_9EUKA)

HSP 1 Score: 150 bits (380), Expect = 5.590e-43
Identity = 77/157 (49.04%), Postives = 103/157 (65.61%), Query Frame = 0
Query:    8 LCKVIVVGDTGSGKSAFLTRVTSARFLSEHCVTIGVEFASRTVVLDGKAVKLQIWDTAGQERFRSITRSYYRGAGGVILTVDVTDPDCMAGLGHWISECCKHSANSSLPILLLATKVDGEH--AVSLDTIRQYATKEGLLFTACSSRTGEGVEDAII 162
            L K I++GDTG GKS  L + T  RF   H +TIGVEF +R + +D K +KLQIWDTAGQE FRSITRSYYRGA G +L  D+T  +    L  W+ +  +HS NS++ I+L+  K D EH  AVS +  +Q+A + GL+F   S++T   VE+A I
Sbjct:    6 LFKYIIIGDTGVGKSCLLLQFTDKRFQQVHDLTIGVEFGARMITIDNKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLDDARQHS-NSNMTIMLIGNKTDLEHRRAVSFEEGQQFANEHGLIFLETSAKTAANVEEAFI 161          
BLAST of mRNA_M-pyrifera_M_contig70009.16753.1 vs. uniprot
Match: UPI0008FEBFF4 (ras-related protein RABB1b isoform X1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=UPI0008FEBFF4)

HSP 1 Score: 150 bits (379), Expect = 9.410e-43
Identity = 78/158 (49.37%), Postives = 103/158 (65.19%), Query Frame = 0
Query:    8 LCKVIVVGDTGSGKSAFLTRVTSARFLSEHCVTIGVEFASRTVVLDGKAVKLQIWDTAGQERFRSITRSYYRGAGGVILTVDVTDPDCMAGLGHWISECCKHSANSSLPILLLATKVDGEH--AVSLDTIRQYATKEGLLFTACSSRTGEGVEDAIIQ 163
            L K I++GDTG GKS  L + T  RF   H +TIGVEF +R V +DG+ +KLQIWDTAGQE FRSITRSYYRGA G +L  D+T  +    L  W+ +  +H AN ++ I+L+  K D  H  AVS +   Q+A + GLLF   S+RT + VE+A I+
Sbjct:    6 LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQH-ANPNMTIMLIGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIK 162          
BLAST of mRNA_M-pyrifera_M_contig70009.16753.1 vs. uniprot
Match: R1DKC2_EMIHU (Rab2, rab family GTPase n=2 Tax=Eukaryota TaxID=2759 RepID=R1DKC2_EMIHU)

HSP 1 Score: 150 bits (378), Expect = 9.990e-43
Identity = 79/157 (50.32%), Postives = 101/157 (64.33%), Query Frame = 0
Query:    8 LCKVIVVGDTGSGKSAFLTRVTSARFLSEHCVTIGVEFASRTVVLDGKAVKLQIWDTAGQERFRSITRSYYRGAGGVILTVDVTDPDCMAGLGHWISECCKHSANSSLPILLLATKVDGEH--AVSLDTIRQYATKEGLLFTACSSRTGEGVEDAII 162
            L K I++GDTG GKS  L + T  RF   H +TIGVEF +R V LDGK +KLQIWDTAGQE FRSITRSYYRGA G +L  D+T  +    L  W+ +   HS NS++ I+L+  K D EH  AV+ +    +A + GL+F   S++T   VEDA I
Sbjct:    6 LFKYIIIGDTGVGKSCLLLQFTDKRFQQVHDLTIGVEFGARMVTLDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLDDARTHS-NSNMTIMLIGNKSDMEHRRAVTAEEGEAFAQEHGLIFLETSAKTAANVEDAFI 161          
BLAST of mRNA_M-pyrifera_M_contig70009.16753.1 vs. uniprot
Match: RAB1B_ARATH (Ras-related protein RABB1b n=4 Tax=Arabidopsis thaliana TaxID=3702 RepID=RAB1B_ARATH)

HSP 1 Score: 150 bits (378), Expect = 1.090e-42
Identity = 78/157 (49.68%), Postives = 103/157 (65.61%), Query Frame = 0
Query:    8 LCKVIVVGDTGSGKSAFLTRVTSARFLSEHCVTIGVEFASRTVVLDGKAVKLQIWDTAGQERFRSITRSYYRGAGGVILTVDVTDPDCMAGLGHWISECCKHSANSSLPILLLATKVDGEH--AVSLDTIRQYATKEGLLFTACSSRTGEGVEDAII 162
            L K I++GDTG GKS  L + T  RF   H +TIGVEF +R V +DG+ +KLQIWDTAGQE FRSITRSYYRGA G +L  D+T  +    L  W+ +  +H AN ++ I+L+  K D  H  AVS +  +Q+A + GLLF   S+RT + VE+A I
Sbjct:    6 LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQH-ANPNMSIMLIGNKCDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFI 161          
BLAST of mRNA_M-pyrifera_M_contig70009.16753.1 vs. uniprot
Match: A0A4S8IIS8_MUSBA (Uncharacterized protein n=2 Tax=Musa TaxID=4640 RepID=A0A4S8IIS8_MUSBA)

HSP 1 Score: 150 bits (378), Expect = 1.090e-42
Identity = 77/157 (49.04%), Postives = 102/157 (64.97%), Query Frame = 0
Query:    8 LCKVIVVGDTGSGKSAFLTRVTSARFLSEHCVTIGVEFASRTVVLDGKAVKLQIWDTAGQERFRSITRSYYRGAGGVILTVDVTDPDCMAGLGHWISECCKHSANSSLPILLLATKVDGEH--AVSLDTIRQYATKEGLLFTACSSRTGEGVEDAII 162
            L K I++GDTG GKS  L + T  RF   H +TIGVEF +R + +D K +KLQIWDTAGQE FRSITRSYYRGA G +L  D+T  +    L  W+ E  +H ANS++ I+L+  K D  H  AVS +   Q+A + GL+F   S++T + VE+A I
Sbjct:    6 LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEEARQH-ANSNMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFI 161          
BLAST of mRNA_M-pyrifera_M_contig70009.16753.1 vs. uniprot
Match: A0A803L2U0_CHEQI (Uncharacterized protein n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803L2U0_CHEQI)

HSP 1 Score: 151 bits (382), Expect = 1.090e-42
Identity = 76/158 (48.10%), Postives = 104/158 (65.82%), Query Frame = 0
Query:    8 LCKVIVVGDTGSGKSAFLTRVTSARFLSEHCVTIGVEFASRTVVLDGKAVKLQIWDTAGQERFRSITRSYYRGAGGVILTVDVTDPDCMAGLGHWISECCKHSANSSLPILLLATKVDGEH--AVSLDTIRQYATKEGLLFTACSSRTGEGVEDAIIQ 163
            L K I++GDTG GKS  L + T  RF   H +TIGVEF +R + +D K +KLQIWDTAGQE FRSITRSYYRGA G +L  D+T  +    L  W+ +  +H AN+++ I+L+  K D  H  AVS +   Q+A + GL+F  CS++T + VE+A I+
Sbjct:    6 LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQH-ANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMECSAKTAQNVEEAFIK 162          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig70009.16753.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
M1AYA4_SOLTU6.740e-4450.63GTP-binding 2 n=79 Tax=Pentapetalae TaxID=1437201 ... [more]
A0A6U5LA03_9STRA1.100e-4349.68Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A0V0HLN6_SOLCH1.740e-4350.63Putative ras-related protein RABB1b-like n=2 Tax=l... [more]
A0A0K9RFG8_SPIOL2.710e-4348.10Uncharacterized protein n=4 Tax=Chenopodiaceae Tax... [more]
A0A0M0K455_9EUKA5.590e-4349.04Rab family gtpase n=4 Tax=Prymnesiophyceae TaxID=2... [more]
UPI0008FEBFF49.410e-4349.37ras-related protein RABB1b isoform X1 n=1 Tax=Viti... [more]
R1DKC2_EMIHU9.990e-4350.32Rab2, rab family GTPase n=2 Tax=Eukaryota TaxID=27... [more]
RAB1B_ARATH1.090e-4249.68Ras-related protein RABB1b n=4 Tax=Arabidopsis tha... [more]
A0A4S8IIS8_MUSBA1.090e-4249.04Uncharacterized protein n=2 Tax=Musa TaxID=4640 Re... [more]
A0A803L2U0_CHEQI1.090e-4248.10Uncharacterized protein n=1 Tax=Chenopodium quinoa... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 32..48
score: 31.54
coord: 9..30
score: 39.48
coord: 113..126
score: 31.38
coord: 50..72
score: 57.64
coord: 146..164
score: 21.53
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 6..164
e-value: 6.4E-8
score: 0.5
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 11..164
e-value: 4.3E-6
score: -39.7
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 9..164
e-value: 1.6E-49
score: 180.5
NoneNo IPR availableGENE3D3.40.50.300coord: 4..164
e-value: 3.6E-48
score: 165.5
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 7..163
NoneNo IPR availablePANTHERPTHR24073:SF972RAS-RELATED PROTEIN RABB1Bcoord: 7..163
NoneNo IPR availablePROSITEPS51419RABcoord: 4..164
score: 23.83
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 10..160
e-value: 1.3E-22
score: 78.3
IPR001806Small GTPasePFAMPF00071Rascoord: 10..163
e-value: 3.5E-40
score: 137.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 6..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig70009contigM-pyrifera_M_contig70009:409..951 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig70009.16753.1mRNA_M-pyrifera_M_contig70009.16753.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig70009 409..951 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig70009.16753.1 ID=prot_M-pyrifera_M_contig70009.16753.1|Name=mRNA_M-pyrifera_M_contig70009.16753.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=164bp
MLTHESVLCKVIVVGDTGSGKSAFLTRVTSARFLSEHCVTIGVEFASRTV
VLDGKAVKLQIWDTAGQERFRSITRSYYRGAGGVILTVDVTDPDCMAGLG
HWISECCKHSANSSLPILLLATKVDGEHAVSLDTIRQYATKEGLLFTACS
SRTGEGVEDAIIQL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005225Small_GTP-bd_dom
IPR001806Small_GTPase
IPR027417P-loop_NTPase