prot_M-pyrifera_M_contig69984.16747.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig69984.16747.1
Unique Nameprot_M-pyrifera_M_contig69984.16747.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length49
Homology
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BLAST of mRNA_M-pyrifera_M_contig69984.16747.1 vs. uniprot
Match: K5D638_RHOBT (Uncharacterized protein n=2 Tax=Rhodopirellula baltica TaxID=265606 RepID=K5D638_RHOBT)

HSP 1 Score: 67.8 bits (164), Expect = 7.810e-14
Identity = 36/48 (75.00%), Postives = 38/48 (79.17%), Query Frame = 0 
Query:    1 MRQDGVDQNRRLAIFPVPPLSKSLRHSFKGLSKGLQRGKQVEVSFETF 48
            MR   VDQNRRLAIFPVPPLSK+LR S K  S  LQRGKQVEVS ET+
Sbjct:    1 MRLIEVDQNRRLAIFPVPPLSKALRGSSKEPSSVLQRGKQVEVSSETY 48
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig69984.16747.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
K5D638_RHOBT7.810e-1475.00Uncharacterized protein n=2 Tax=Rhodopirellula bal... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig69984contigM-pyrifera_M_contig69984:376..522 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig69984.16747.1mRNA_M-pyrifera_M_contig69984.16747.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig69984 376..593 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig69984.16747.1 ID=prot_M-pyrifera_M_contig69984.16747.1|Name=mRNA_M-pyrifera_M_contig69984.16747.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=49bp
MRQDGVDQNRRLAIFPVPPLSKSLRHSFKGLSKGLQRGKQVEVSFETF*
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