prot_M-pyrifera_M_contig6975.16704.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig6975.16704.1
Unique Nameprot_M-pyrifera_M_contig6975.16704.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length63
Homology
BLAST of mRNA_M-pyrifera_M_contig6975.16704.1 vs. uniprot
Match: D8LMP4_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMP4_ECTSI)

HSP 1 Score: 54.7 bits (130), Expect = 3.570e-7
Identity = 22/38 (57.89%), Postives = 28/38 (73.68%), Query Frame = 0
Query:    9 GHVFCFVCIHKWSKKETKCPACRRKFSTISKTLPLEEL 46
             HVFCF CIHKW+K E+ CP CR +  +I+KTL L E+
Sbjct:   59 NHVFCFKCIHKWTKTESACPVCRVEVRSITKTLSLREI 96          
BLAST of mRNA_M-pyrifera_M_contig6975.16704.1 vs. uniprot
Match: A0A843U288_COLES (Uncharacterized protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843U288_COLES)

HSP 1 Score: 53.9 bits (128), Expect = 7.820e-7
Identity = 21/36 (58.33%), Postives = 27/36 (75.00%), Query Frame = 0
Query:    9 GHVFCFVCIHKWSKKETKCPACRRKFSTISKTLPLE 44
             H FCF CI +WSK E+KCP C+R+F T+SK+  LE
Sbjct:  335 AHYFCFACIMEWSKVESKCPVCKRRFMTVSKSARLE 370          
BLAST of mRNA_M-pyrifera_M_contig6975.16704.1 vs. uniprot
Match: A0A2H9ZYQ4_9ASPA (Methyl-CpG-binding domain-containing protein 9 n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2H9ZYQ4_9ASPA)

HSP 1 Score: 53.9 bits (128), Expect = 7.820e-7
Identity = 25/46 (54.35%), Postives = 33/46 (71.74%), Query Frame = 0
Query:    9 GHVFCFVCIHKWSKKETKCPACRRKFSTISKTL---PLEELRRELI 51
             H FCF CI +WSK E++CP C+R+FSTI+KT    P  E+RR +I
Sbjct:  372 SHYFCFACIMEWSKVESRCPLCKRRFSTITKTSRSDPGLEIRRPVI 417          
BLAST of mRNA_M-pyrifera_M_contig6975.16704.1 vs. uniprot
Match: S8CIV9_9LAMI (Uncharacterized protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8CIV9_9LAMI)

HSP 1 Score: 53.1 bits (126), Expect = 9.910e-7
Identity = 19/34 (55.88%), Postives = 28/34 (82.35%), Query Frame = 0
Query:    9 GHVFCFVCIHKWSKKETKCPACRRKFSTISKTLP 42
             H FCF CI++W+K E++CP C+++FSTI KT+P
Sbjct:   89 SHYFCFSCINEWAKVESRCPVCKKRFSTIIKTVP 122          
BLAST of mRNA_M-pyrifera_M_contig6975.16704.1 vs. uniprot
Match: UPI001C4B30AD (uncharacterized protein LOC121989484 n=1 Tax=Zingiber officinale TaxID=94328 RepID=UPI001C4B30AD)

HSP 1 Score: 52.8 bits (125), Expect = 1.980e-6
Identity = 20/38 (52.63%), Postives = 28/38 (73.68%), Query Frame = 0
Query:    9 GHVFCFVCIHKWSKKETKCPACRRKFSTISKTLPLEEL 46
             H FC  CI +WSK ET+CP C+R+FST++KT  L+ +
Sbjct:  292 AHFFCSACIMEWSKVETRCPVCKRRFSTVTKTSKLDPM 329          
BLAST of mRNA_M-pyrifera_M_contig6975.16704.1 vs. uniprot
Match: A0A0D9VT38_9ORYZ (Uncharacterized protein n=1 Tax=Leersia perrieri TaxID=77586 RepID=A0A0D9VT38_9ORYZ)

HSP 1 Score: 52.8 bits (125), Expect = 2.000e-6
Identity = 20/33 (60.61%), Postives = 27/33 (81.82%), Query Frame = 0
Query:    9 GHVFCFVCIHKWSKKETKCPACRRKFSTISKTL 41
             H FCF CI +WSK E+KCP C+R+F+TI+K+L
Sbjct:  430 SHYFCFACIMQWSKVESKCPLCKRRFTTITKSL 462          
BLAST of mRNA_M-pyrifera_M_contig6975.16704.1 vs. uniprot
Match: A0A7J7NEV4_9MAGN (Uncharacterized protein n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7NEV4_9MAGN)

HSP 1 Score: 51.6 bits (122), Expect = 5.120e-6
Identity = 20/35 (57.14%), Postives = 27/35 (77.14%), Query Frame = 0
Query:    9 GHVFCFVCIHKWSKKETKCPACRRKFSTISKTLPL 43
             H FCF CI +WSK E++CPAC+R+F TI+K+  L
Sbjct:  434 NHFFCFACIMEWSKVESRCPACKRRFITITKSAKL 468          
BLAST of mRNA_M-pyrifera_M_contig6975.16704.1 vs. uniprot
Match: A0A2I0XD59_9ASPA (Methyl-CpG-binding domain-containing protein 9 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0XD59_9ASPA)

HSP 1 Score: 51.6 bits (122), Expect = 5.120e-6
Identity = 23/46 (50.00%), Postives = 33/46 (71.74%), Query Frame = 0
Query:    9 GHVFCFVCIHKWSKKETKCPACRRKFSTISKTL---PLEELRRELI 51
             H FCF CI +WSK E++CP C+R+F TI+K+    P+ E+RR +I
Sbjct:  375 SHYFCFSCIMEWSKVESRCPLCKRRFVTITKSSRSDPMLEMRRPVI 420          
BLAST of mRNA_M-pyrifera_M_contig6975.16704.1 vs. uniprot
Match: A0A7I8IWM2_SPIIN (Hypothetical protein n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8IWM2_SPIIN)

HSP 1 Score: 51.2 bits (121), Expect = 6.930e-6
Identity = 18/33 (54.55%), Postives = 26/33 (78.79%), Query Frame = 0
Query:    9 GHVFCFVCIHKWSKKETKCPACRRKFSTISKTL 41
             H FCF CI +WSK E++CP C+R+F T+SK++
Sbjct:  203 SHFFCFACIMEWSKVESRCPVCKRRFKTVSKSV 235          
BLAST of mRNA_M-pyrifera_M_contig6975.16704.1 vs. uniprot
Match: A0A7I8KL25_SPIIN (Hypothetical protein n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8KL25_SPIIN)

HSP 1 Score: 51.2 bits (121), Expect = 6.980e-6
Identity = 18/33 (54.55%), Postives = 26/33 (78.79%), Query Frame = 0
Query:    9 GHVFCFVCIHKWSKKETKCPACRRKFSTISKTL 41
             H FCF CI +WSK E++CP C+R+F T+SK++
Sbjct:  349 SHFFCFACIMEWSKVESRCPVCKRRFKTVSKSV 381          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6975.16704.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMP4_ECTSI3.570e-757.89RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A843U288_COLES7.820e-758.33Uncharacterized protein n=1 Tax=Colocasia esculent... [more]
A0A2H9ZYQ4_9ASPA7.820e-754.35Methyl-CpG-binding domain-containing protein 9 n=1... [more]
S8CIV9_9LAMI9.910e-755.88Uncharacterized protein (Fragment) n=1 Tax=Genlise... [more]
UPI001C4B30AD1.980e-652.63uncharacterized protein LOC121989484 n=1 Tax=Zingi... [more]
A0A0D9VT38_9ORYZ2.000e-660.61Uncharacterized protein n=1 Tax=Leersia perrieri T... [more]
A0A7J7NEV4_9MAGN5.120e-657.14Uncharacterized protein n=1 Tax=Kingdonia uniflora... [more]
A0A2I0XD59_9ASPA5.120e-650.00Methyl-CpG-binding domain-containing protein 9 n=1... [more]
A0A7I8IWM2_SPIIN6.930e-654.55Hypothetical protein n=1 Tax=Spirodela intermedia ... [more]
A0A7I8KL25_SPIIN6.980e-654.55Hypothetical protein n=1 Tax=Spirodela intermedia ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 9..31
e-value: 2.4E-6
score: 27.8
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 2..62
e-value: 2.1E-10
score: 42.2
NoneNo IPR availablePANTHERPTHR47177FAMILY NOT NAMEDcoord: 10..40
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 9..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig6975contigM-pyrifera_M_contig6975:77..265 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig6975.16704.1mRNA_M-pyrifera_M_contig6975.16704.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig6975 77..265 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig6975.16704.1 ID=prot_M-pyrifera_M_contig6975.16704.1|Name=mRNA_M-pyrifera_M_contig6975.16704.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=63bp
MKYVSRVQGHVFCFVCIHKWSKKETKCPACRRKFSTISKTLPLEELRREL
ILRMVSGEKVKLR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD