prot_M-pyrifera_M_contig69674.16692.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig69674.16692.1
Unique Nameprot_M-pyrifera_M_contig69674.16692.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length133
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig69674.16692.1 vs. uniprot
Match: A0A6H5JMA1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMA1_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 4.510e-7
Identity = 32/101 (31.68%), Postives = 55/101 (54.46%), Query Frame = 0 
Query:   32 LVRMGNERMPERVVFGEVEGGKGYLGGQEQGWMGCINGEHDLSLFDLPTEET--QWTLVAKKSGKWFRGVEETAEQYMKRCFVKKKENVAKRRALEGKNAQ 130
            ++RM + R+P+R++ GE+ GG GY GGQE  W+  +    DL  F +  E+   +W   AK    W+  +E+ A  +M++   ++ E  AKR     + A+
Sbjct:  141 IMRMEDNRLPKRMLLGEMAGGAGYRGGQESDWVYRLG--EDLVAFGMKEEKEGGRWKESAKDQEAWYDKIEDGAAWFMRKWHRQEAEASAKRXXXRAEEAE 239
[Close]
BLAST of mRNA_M-pyrifera_M_contig69674.16692.1 vs. uniprot
Match: A0A6H5L144_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L144_9PHAE)

HSP 1 Score: 54.7 bits (130), Expect = 5.250e-6
Identity = 27/81 (33.33%), Postives = 47/81 (58.02%), Query Frame = 0 
Query:   31 WLVRMGNERMPERVVFGEVEGGKGYLGGQEQGWMGCINGEHDLSLFDLPTEET--QWTLVAKKSGKWFRGVEETAEQYMKR 109
            +++RMG+ R+P+R++ G + GG GY GGQE  W+  +    DL  F +  E+   +W   AK    W+  +E+ A  +M++
Sbjct:  801 FVMRMGDNRLPKRMLLGAMAGGTGYRGGQESDWVYRLG--EDLVAFGMKEEKEGGRWKESAKDQEAWYDKIEDGAAWFMRK 879
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig69674.16692.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JMA1_9PHAE4.510e-731.68Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L144_9PHAE5.250e-633.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig69674contigM-pyrifera_M_contig69674:697..1095 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig69674.16692.1mRNA_M-pyrifera_M_contig69674.16692.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig69674 697..1097 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig69674.16692.1 ID=prot_M-pyrifera_M_contig69674.16692.1|Name=mRNA_M-pyrifera_M_contig69674.16692.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=133bp
CFHTQTHWPRPAVRMSRRRCESGGHFSRGSWLVRMGNERMPERVVFGEVE
GGKGYLGGQEQGWMGCINGEHDLSLFDLPTEETQWTLVAKKSGKWFRGVE
ETAEQYMKRCFVKKKENVAKRRALEGKNAQQLN
back to top