prot_M-pyrifera_M_contig69663.16686.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig69663.16686.1
Unique Nameprot_M-pyrifera_M_contig69663.16686.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length104
Homology
BLAST of mRNA_M-pyrifera_M_contig69663.16686.1 vs. uniprot
Match: A0A3A4PNC6_9BACT (Sigma-70 family RNA polymerase sigma factor n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A3A4PNC6_9BACT)

HSP 1 Score: 91.3 bits (225), Expect = 1.580e-20
Identity = 50/99 (50.51%), Postives = 66/99 (66.67%), Query Frame = 0
Query:    1 FDRAWAAGVLSQARRLLEERARGADADSRRHCELLDLRFNEGLPIRTIAARWDVPAESLHREYAKARVEFKDALEETLRFENQNAPLDLDAELRELLEL 99
            FDRAWA  V+ +A   + +RA  ADA++ R  ELL LRF+EGLPIR IAARW+  A  +HR+YA+AR EFK AL E + F +  A  D + E  +LL +
Sbjct:  125 FDRAWARSVVREAAERMAQRAADADAEAVRRVELLRLRFHEGLPIRDIAARWNRDAVLVHRDYARARKEFKRALIEVMSFYHPGAAEDAERECAQLLAM 223          
BLAST of mRNA_M-pyrifera_M_contig69663.16686.1 vs. uniprot
Match: A0A2D6PQ20_9BACT (RNA polymerase subunit sigma-24 n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D6PQ20_9BACT)

HSP 1 Score: 87.4 bits (215), Expect = 5.110e-19
Identity = 44/99 (44.44%), Postives = 62/99 (62.63%), Query Frame = 0
Query:    1 FDRAWAAGVLSQARRLLEERARGADADSRRHCELLDLRFNEGLPIRTIAARWDVPAESLHREYAKARVEFKDALEETLRFENQNAPLDLDAELRELLEL 99
            FDRAWA  ++ QA   L+E AR      RR  ELL LRF +G+P+R +A RWD+    +H++YA+AR EF++AL E + +   +A   +D E R LL L
Sbjct:  128 FDRAWAGSIMEQAADRLDELARDGSPAFRRRAELLRLRFRDGVPLRDVAVRWDLQPARIHKDYARAREEFREALREVIAWHLPDAADGIDEECRNLLAL 226          
BLAST of mRNA_M-pyrifera_M_contig69663.16686.1 vs. uniprot
Match: A0A7Y2MY67_9BACT (Sigma-70 family RNA polymerase sigma factor n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Y2MY67_9BACT)

HSP 1 Score: 87.0 bits (214), Expect = 6.660e-19
Identity = 50/99 (50.51%), Postives = 63/99 (63.64%), Query Frame = 0
Query:    1 FDRAWAAGVLSQARRLLEERARGADADSRRHCELLDLRFNEGLPIRTIAARWDVPAESLHREYAKARVEFKDALEETLRFENQNAPLDLDAELRELLEL 99
            FDRAWA  V+ +A     ERA GA  D+ +  ELL LRF+E LPIR IA  W    E+LHREYA+AR EF+ AL + + F +  AP  +DAE  EL+ L
Sbjct:  124 FDRAWARTVMREAAARQRERAAGAP-DAEQRVELLRLRFHEDLPIRRIAELWGADPEALHREYARARREFRAALTDVVAFHHPGAPAAIDAECVELVRL 221          
BLAST of mRNA_M-pyrifera_M_contig69663.16686.1 vs. uniprot
Match: A0A7Y4SUQ5_9BACT (Sigma-70 family RNA polymerase sigma factor n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7Y4SUQ5_9BACT)

HSP 1 Score: 82.0 bits (201), Expect = 5.890e-17
Identity = 47/99 (47.47%), Postives = 62/99 (62.63%), Query Frame = 0
Query:    1 FDRAWAAGVLSQARRLLEERARGADADSRRHCELLDLRFNEGLPIRTIAARWDVPAESLHREYAKARVEFKDALEETLRFENQNAPLDLDAELRELLEL 99
            FDRAWAA ++ +A  L E+ AR    D+ R  ELL L F++ L I  IA RW V AE LH+E A+A+ EFK+AL   + F +  AP  ++ E RELL L
Sbjct:  127 FDRAWAASIMREALDLQEDLARSQGEDATRRFELLRLLFDQELSIPKIAERWGVDAELLHKEAARAKREFKEALRSVVAFHHPEAPELVERECRELLTL 225          
BLAST of mRNA_M-pyrifera_M_contig69663.16686.1 vs. uniprot
Match: L0DR64_SINAD (DNA-directed RNA polymerase specialized sigma subunit, sigma24 n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) TaxID=886293 RepID=L0DR64_SINAD)

HSP 1 Score: 82.0 bits (201), Expect = 5.990e-17
Identity = 46/99 (46.46%), Postives = 58/99 (58.59%), Query Frame = 0
Query:    1 FDRAWAAGVLSQARRLLEERARGADADSRRHCELLDLRFNEGLPIRTIAARWDVPAESLHREYAKARVEFKDALEETLRFENQNAPLDLDAELRELLEL 99
            FDRAWA  V+ +A     E A      + R  ELL LRF+E +PIR IA  W V   SLH EYA+AR EF+ ALE+ +   +  AP D+D E  +LL L
Sbjct:  128 FDRAWAKAVMREAAERQSELAAQRGEAALRRVELLRLRFHEEMPIREIAQLWGVDTPSLHHEYARARQEFRSALEQVVALHHPGAPEDVDRECAQLLSL 226          
BLAST of mRNA_M-pyrifera_M_contig69663.16686.1 vs. uniprot
Match: A0A2D5Z591_9BACT (RNA polymerase subunit sigma-24 n=1 Tax=Phycisphaeraceae bacterium TaxID=2026777 RepID=A0A2D5Z591_9BACT)

HSP 1 Score: 65.1 bits (157), Expect = 1.670e-10
Identity = 39/101 (38.61%), Postives = 60/101 (59.41%), Query Frame = 0
Query:    1 FDRAWAAGVLSQARRLLEERARGADADSRRHCELLDLRFNEGLPIRTIAARWDVP-AESLHREYAKARVEFKDALEETLRFENQNAPL-DLDAELRELLEL 99
            FDR WA  ++ +A +  EE AR A  +  +  ELL +RF +GLP+R IAAR      +++HRE  +AR+EF++AL+E + +    A   D++ E   L  L
Sbjct:  129 FDRGWAKTIVREAAQRHEELARAAGREHLQRLELLRMRFGDGLPVREIAARLGKEDKDAIHRELRRARLEFRNALQEIVAYHQPTASAGDVERECERLQAL 229          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig69663.16686.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A3A4PNC6_9BACT1.580e-2050.51Sigma-70 family RNA polymerase sigma factor n=1 Ta... [more]
A0A2D6PQ20_9BACT5.110e-1944.44RNA polymerase subunit sigma-24 n=1 Tax=Planctomyc... [more]
A0A7Y2MY67_9BACT6.660e-1950.51Sigma-70 family RNA polymerase sigma factor n=1 Ta... [more]
A0A7Y4SUQ5_9BACT5.890e-1747.47Sigma-70 family RNA polymerase sigma factor n=1 Ta... [more]
L0DR64_SINAD5.990e-1746.46DNA-directed RNA polymerase specialized sigma subu... [more]
A0A2D5Z591_9BACT1.670e-1038.61RNA polymerase subunit sigma-24 n=1 Tax=Phycisphae... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 56..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig69663contigM-pyrifera_M_contig69663:39..350 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig69663.16686.1mRNA_M-pyrifera_M_contig69663.16686.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig69663 39..350 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig69663.16686.1 ID=prot_M-pyrifera_M_contig69663.16686.1|Name=mRNA_M-pyrifera_M_contig69663.16686.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=104bp
FDRAWAAGVLSQARRLLEERARGADADSRRHCELLDLRFNEGLPIRTIAA
RWDVPAESLHREYAKARVEFKDALEETLRFENQNAPLDLDAELRELLELS
SSR*
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