prot_M-pyrifera_M_contig6959.16679.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig6959.16679.1
Unique Nameprot_M-pyrifera_M_contig6959.16679.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length424
Homology
BLAST of mRNA_M-pyrifera_M_contig6959.16679.1 vs. uniprot
Match: D7FJQ3_ECTSI (PHD-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJQ3_ECTSI)

HSP 1 Score: 385 bits (990), Expect = 2.910e-125
Identity = 212/319 (66.46%), Postives = 243/319 (76.18%), Query Frame = 0
Query:    1 QVYEQDGWKSSGREKLKPTAELLKATERLRRVKAELRELTKGLTEMNAGGPRWGALQEDPEGFIEVAEIVCTKCNRGDSDDKDDILLCDYAGCFRAYHQNCLLPPIKPEAFPGEEEDWFCWQCECLADCLEILEKEFPQGSKFASWEDVFPDAKDGAGTGAGEQQGVISLADSDDSDDPNDESFKDDDTRWMSDAESVGSDEVAKLHSEAADFAESDDNADMGFGGGSSRAG---GSRGSRAIERRVKRNAALGLSDDGMVEALREKRAIAAALAGNGKIDSANICGRRTRRKRSVDYVKLNETVFGDEYVDGDQLSSD 316
            QVY+QDGWKSSGREKLKPTAEL KA ER+R ++AELRE+T+ LTEMN GG RWGA+QED EG IEV EI+CTKC +GDSDD DDILLCDYAGCFRAYHQNCL PPIKPE FP EEEDWFCWQCECL DC E+LE EF QG KF SW+DVFP  + GA  GA  QQ V+      DSD+ +DESFK D   W+SDAESVGSDEV+KL+SEA D A S +  D   G  ++  G   G R SRA+ RR KR AALGL  D + +   +KR I AALAGN  +D+ANI   RTRR++SVDYVKLN+TVFGDE VDGD +SSD
Sbjct:   43 QVYQQDGWKSSGREKLKPTAELEKARERIRGIQAELREVTRRLTEMNPGGLRWGAIQEDGEGNIEVDEIMCTKCGQGDSDDHDDILLCDYAGCFRAYHQNCLSPPIKPEVFPEEEEDWFCWQCECLTDCFEMLENEF-QGEKFTSWKDVFPVVETGAEGGAAGQQDVLPT----DSDEDDDESFKAD---WLSDAESVGSDEVSKLYSEAGDLACSGETDDGDVGSTAAEEGSLGGGRRSRALARRSKRYAALGLGGDHVAQMQLKKRDITAALAGN-TVDTANIIESRTRRRKSVDYVKLNKTVFGDESVDGDHVSSD 352          
BLAST of mRNA_M-pyrifera_M_contig6959.16679.1 vs. uniprot
Match: A0A6H5KZT3_9PHAE (PHD-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZT3_9PHAE)

HSP 1 Score: 352 bits (904), Expect = 1.440e-110
Identity = 209/382 (54.71%), Postives = 238/382 (62.30%), Query Frame = 0
Query:    1 QVYEQDGWKSSGREKLKPTAELLKATERLRRVKAELRELTKGLTEMNAGGPRWGALQEDPEGFIEVAEIVCTKCNRGDSDDKDDILLCDYAGCFRAYHQNCLLPPIKPEAFPGEEEDWFCWQCECLADCLEILEKEFPQGSKFASWEDVFPDAKDGAGTGAGEQQGVISLADSDDSDDPNDESF----------------------------------------------------------KDDDTRWMSDAESVGSDEVAKLHSEAADFAESDDNADMGFG-----GGSSRAGGSRGSRAIERRVKRNAALGLSDDGMVEALREKRAIAAALAGNGKIDSANICGRRTRRKRSVDYVKLNETVFGDEYVDGDQLSSDAHD 319
            QVY+QDGWKSSGREKLKPTAEL KA E++R ++AELRE+T+ LTEMN GG RWGA+QED EG IEV EI+CTKC +GDSDD DDILLCDYAGCFRAYHQNCL PPIKPE FP EEEDWFCWQCECL DC E+LE EF QG KF SW+DVFP  + GA  GA  QQ V+          P D                                                              + +  W+SDAESVGSDEV+KL+SEA D A S +  D   G     GGS   GG R SRA+ RR KR AALGL  D + +   EKR I AALAGN  +D+ANI   RTRR++SVDYVKLN+TVFGDE VDGD +SSD  D
Sbjct:  178 QVYQQDGWKSSGREKLKPTAELEKAREKIRGIQAELREVTRRLTEMNPGGLRWGAIQEDGEGNIEVDEIMCTKCGQGDSDDHDDILLCDYAGCFRAYHQNCLSPPIKPEVFPEEEEDWFCWQCECLTDCFEMLENEF-QGEKFTSWKDVFPVVETGAEGGAAGQQDVL----------PTDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNNSEADWLSDAESVGSDEVSKLYSEAGDLACSAETDDGDVGSTAAEGGS--LGGGRRSRALARRSKRYAALGLGGDHVAQMQLEKRDITAALAGN-TMDTANIIESRTRRRKSVDYVKLNQTVFGDESVDGDHVSSDEQD 545          
BLAST of mRNA_M-pyrifera_M_contig6959.16679.1 vs. uniprot
Match: L1JX63_GUITC (PHD-type domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JX63_GUITC)

HSP 1 Score: 119 bits (297), Expect = 2.760e-26
Identity = 64/160 (40.00%), Postives = 91/160 (56.88%), Query Frame = 0
Query:    2 VYEQDGWKSSGREKLKPTAELLKATERLRRVKAELRELTKGL----TEMNAGGPRWGALQEDPEGFIEVAEIVCTKCNRGDSDDKDDILLCDYAGCFRAYHQNCLLPPIKPEAFPGEEEDWFCWQCECLADCLEILEKEFPQGSKFASWEDVFPDAKDGA 157
             YEQDGW  S   KLKPT EL K++E L   K E++EL K +     E+     R    + + EG     +IVC+ C  GD+   +DILLCDY+ C RA+HQ C  P +     P ++EDWFC  C C  DC+E + + F  G+ + +WE +FP+ ++ A
Sbjct:  155 AYEQDGWGPSSHRKLKPTEELKKSSESLIHAKKEIKELLKQMDPASNELAQKETRIDEREYEAEGLA-FEKIVCSICGTGDARRGNDILLCDYSECNRAFHQKCHHPQVTE--LPHDDEDWFCTHCLCYTDCIEAVNELF--GTHYTTWEKMFPELEENA 309          
BLAST of mRNA_M-pyrifera_M_contig6959.16679.1 vs. uniprot
Match: A0A7S4NP67_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4NP67_GUITH)

HSP 1 Score: 119 bits (297), Expect = 1.300e-25
Identity = 64/160 (40.00%), Postives = 91/160 (56.88%), Query Frame = 0
Query:    2 VYEQDGWKSSGREKLKPTAELLKATERLRRVKAELRELTKGL----TEMNAGGPRWGALQEDPEGFIEVAEIVCTKCNRGDSDDKDDILLCDYAGCFRAYHQNCLLPPIKPEAFPGEEEDWFCWQCECLADCLEILEKEFPQGSKFASWEDVFPDAKDGA 157
             YEQDGW  S   KLKPT EL K++E L   K E++EL K +     E+     R    + + EG     +IVC+ C  GD+   +DILLCDY+ C RA+HQ C  P +     P ++EDWFC  C C  DC+E + + F  G+ + +WE +FP+ ++ A
Sbjct:  155 AYEQDGWGPSSHRKLKPTEELKKSSESLIHAKKEIKELLKQMDPASNELAQKETRIDEREYEAEGLA-FEKIVCSICGTGDARRGNDILLCDYSECNRAFHQKCHHPQVTE--LPHDDEDWFCTHCLCYTDCIEAVNELF--GTHYTTWEKMFPELEENA 309          
BLAST of mRNA_M-pyrifera_M_contig6959.16679.1 vs. uniprot
Match: C1EG75_MICCC (Uncharacterized protein n=3 Tax=Micromonas TaxID=38832 RepID=C1EG75_MICCC)

HSP 1 Score: 111 bits (278), Expect = 4.620e-23
Identity = 56/152 (36.84%), Postives = 89/152 (58.55%), Query Frame = 0
Query:    2 VYEQDGWKSSGREKLKPTAELLKATERLRRVKAELRELTKGLTEMNAGGPRWGALQEDPEGFIEVAEIVCTKCNRGDSDDKDDILLCDYAGCFRAYHQNCLLPPIKPEAFPGEEEDWFCWQCECLADCLEILEKEFPQ--GSKFASWEDVFP 151
             YE DGWK + REKL+P  E+ K+  ++   K ++R++ + + +M+ G   +    E+  G ++V ++VC +C  GD+ D++DIL+CD   C RA+HQ C++PP+K +  P E   W C  C+   DC   L  +F     +  ASW DVFP
Sbjct:   93 AYEMDGWKGASREKLRPADEIRKSQVKIFNCKLKVRDMFRDI-DMDTGEVSFRDRIEEDTGEVDVEDVVCARCADGDATDENDILICD-GYCDRAFHQRCVVPPVKADEIPDE---WLCPLCDARVDCFYTLNADFDLELDAADASWRDVFP 239          
BLAST of mRNA_M-pyrifera_M_contig6959.16679.1 vs. uniprot
Match: A0A7S1G4N2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G4N2_9STRA)

HSP 1 Score: 103 bits (257), Expect = 1.510e-21
Identity = 58/144 (40.28%), Postives = 80/144 (55.56%), Query Frame = 0
Query:    2 VYEQDGWKSSGREKLKPTAELLKATERLRRVKAELRELTKGLTEMNAGGPRWGA-----LQEDPEG--FIEVAEIVCTKCNRGDSDDKDDILLCDYAGCFRAYHQNCLLPPIKPEAFPGEEED-WFCWQCECLADCLEILEKEF 137
             Y  +GW+ + RE +KP +E+ KA + LR  K  LR +   L   N  G    A     L+ D  G   + + ++ C++C + D+DD +DILLCD+AGC RAYHQ C+ PP   E  P EE D WFC +C C   CLE +   F
Sbjct:   43 AYASNGWQDAKRESVKPKSEISKARQSLRAAKRLLRTILTAL--WNEDGADRAAVTTDLLRADAAGRELVLMEDMPCSRCGQVDADDDNDILLCDHAGCNRAYHQLCMDPPFPTECIPQEELDPWFCNRCRCFLMCLEDVNLAF 184          
BLAST of mRNA_M-pyrifera_M_contig6959.16679.1 vs. uniprot
Match: A4SB05_OSTLU (Uncharacterized protein (Fragment) n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4SB05_OSTLU)

HSP 1 Score: 104 bits (260), Expect = 3.710e-21
Identity = 61/151 (40.40%), Postives = 86/151 (56.95%), Query Frame = 0
Query:    2 VYEQDGWKSSGREKLKPTAELLKATERLRRVKAELRELTKGLTEMNAGGPRWGALQEDPEGFIEVAEIVCTKCNRGDSDDKDDILLCDYAGCFRAYHQNCLLPPIKPEAFPGEEEDWFCWQCECLADCLEILEKEFPQ--GSKFASWEDVF 150
             Y  DGW+ +  +K KP  EL  A E++ + K ++REL KGL E +    R     ED  G  + A+I C+KC   D  ++DDILLCD   C RAYHQ+C++P +K E  P ++E W C  C+   D + +L  E+ Q  G K  + EDVF
Sbjct:   21 AYAGDGWRGAASQKPKPLGELALAREKIFKGKVKIRELFKGL-EFDPN-EREITTVEDELGETDAADIFCSKCAMADDREEDDILLCD-GFCDRAYHQSCVVPAVKTEDIPPDDEGWLCPLCDARVDVIYVLNDEYEQDLGQKCVA-EDVF 167          
BLAST of mRNA_M-pyrifera_M_contig6959.16679.1 vs. uniprot
Match: A0A445D8A8_ARAHY (PHD-type domain-containing protein n=4 Tax=Arachis TaxID=3817 RepID=A0A445D8A8_ARAHY)

HSP 1 Score: 104 bits (259), Expect = 2.140e-20
Identity = 67/177 (37.85%), Postives = 93/177 (52.54%), Query Frame = 0
Query:    2 VYEQDGWKSSGREKLKPTAELLKATERLRRVKAELRELTKGLTEMNAGGPRWGALQEDPEGFIEVAEIVCTKCNRGDSDDKDDILLCDYAGCFRAYHQNCLLPPIKPEAFPGEEEDWFCWQCECLADCLEILEKEFPQGSKFA-SWEDVFPDAKDGAGTGAGEQQGVISLADSDDSD 177
             Y  +GWK    EKLKP  EL +A   + R K ++R+L   L  + A G    +L  D EG I   +I C KC   +    +DI+LCD A C R +HQ CL PP+  +  P   + W C  C C  +C+++L            +WE VFP+A + AGT AG   G+ S+ DSDD+D
Sbjct:  349 AYSGEGWKGYSIEKLKPEKELQRAKSEILRRKLKIRDLFWNLGLLCAEGKLPESLF-DSEGAIRSDDIFCAKCGSKELTTDNDIILCDGA-CDRGFHQCCLNPPLLTKDIPPGHDIWLCPGCNCKLECIKLLNDFLGTSLSIRDTWERVFPEATEAAGTNAGHNLGLPSV-DSDDND 522          
BLAST of mRNA_M-pyrifera_M_contig6959.16679.1 vs. uniprot
Match: A0A835Q8R9_VANPL (Uncharacterized protein n=2 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835Q8R9_VANPL)

HSP 1 Score: 103 bits (258), Expect = 3.950e-20
Identity = 58/153 (37.91%), Postives = 83/153 (54.25%), Query Frame = 0
Query:    2 VYEQDGWKSSGREKLKPTAELLKATERLRRVKAELRELTKGLTEMNAGGPRWGALQEDPEGFIEVAEIVCTKCNRGDSDDKDDILLCDYAGCFRAYHQNCLLPPIKPEAFPGEEEDWFCWQCECLADCLEILEKEFPQGSKFA-SWEDVFPDA 153
             Y  +GWK    EK++P  EL +A   + R K ++RE+ K L  + A G    +L  DP+G I    I C KC   +    +DI+LCD   C R +HQ CL PP+  E  P  ++DW C QC+C ADC+++L +          SWE +FP+A
Sbjct:  177 AYVGEGWKGLSAEKIRPEKELERARSEINRCKLKMREIFKNLDSLMAEGRLPDSLF-DPDG-IYSENIFCGKCGLEEVSADNDIILCDGI-CQRGFHQKCLNPPLLSEYIPAGDDDWLCPQCDCKADCIDLLSELGGMDLSIEDSWERIFPEA 326          
BLAST of mRNA_M-pyrifera_M_contig6959.16679.1 vs. uniprot
Match: A0A482SG36_9ARCH (PHD-type domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SG36_9ARCH)

HSP 1 Score: 98.6 bits (244), Expect = 4.890e-20
Identity = 49/111 (44.14%), Postives = 68/111 (61.26%), Query Frame = 0
Query:   24 KATERLRRVKAELRELTKGLTEMNAGGPRWGAL-QEDPEGFIEVAEIVCTKCNRGDSDDKDDILLCDYAGCFRAYHQNCLLPPIKPEAFPGEEEDWFCWQCECLADCLEIL 133
            K+ E++   K  +    + ++E N     W  L Q D E  I+V EI+C+KC +G+  + +DILLCD AGC RAYHQ CL P I  E     E+DWFCWQCEC+ DC++ +
Sbjct:   94 KSAEKILEAKKGILRTFQAISEENQDHVCWPQLAQGDEEDMIDVGEIMCSKC-QGEEVEGNDILLCDRAGCLRAYHQLCLEPAIDLEKM-DMEKDWFCWQCECIDDCMDYV 202          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6959.16679.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJQ3_ECTSI2.910e-12566.46PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KZT3_9PHAE1.440e-11054.71PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
L1JX63_GUITC2.760e-2640.00PHD-type domain-containing protein n=1 Tax=Guillar... [more]
A0A7S4NP67_GUITH1.300e-2540.00Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
C1EG75_MICCC4.620e-2336.84Uncharacterized protein n=3 Tax=Micromonas TaxID=3... [more]
A0A7S1G4N2_9STRA1.510e-2140.28Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A4SB05_OSTLU3.710e-2140.40Uncharacterized protein (Fragment) n=1 Tax=Ostreoc... [more]
A0A445D8A8_ARAHY2.140e-2037.85PHD-type domain-containing protein n=4 Tax=Arachis... [more]
A0A835Q8R9_VANPL3.950e-2037.91Uncharacterized protein n=2 Tax=Vanilla planifolia... [more]
A0A482SG36_9ARCH4.890e-2044.14PHD-type domain-containing protein n=1 Tax=archaeo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 22..42
NoneNo IPR availablePANTHERPTHR12628POLYCOMB-LIKE TRANSCRIPTION FACTORcoord: 1..344
IPR017956AT hook, DNA-binding motifPRINTSPR00929ATHOOKcoord: 412..422
score: 58.71
coord: 389..400
score: 43.4
coord: 358..368
score: 69.32
IPR017956AT hook, DNA-binding motifSMARTSM00384AT_hook_2coord: 414..424
e-value: 150.0
score: 3.0
coord: 391..403
e-value: 6.6
score: 10.7
coord: 358..370
e-value: 0.8
score: 15.8
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 70..124
e-value: 3.3E-10
score: 49.9
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 71..125
e-value: 4.6E-8
score: 32.8
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 68..126
score: 10.077
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 65..127
e-value: 1.4E-11
score: 45.7
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 71..123
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 60..129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig6959contigM-pyrifera_M_contig6959:3635..13288 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig6959.16679.1mRNA_M-pyrifera_M_contig6959.16679.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig6959 3635..13288 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig6959.16679.1 ID=prot_M-pyrifera_M_contig6959.16679.1|Name=mRNA_M-pyrifera_M_contig6959.16679.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=424bp
QVYEQDGWKSSGREKLKPTAELLKATERLRRVKAELRELTKGLTEMNAGG
PRWGALQEDPEGFIEVAEIVCTKCNRGDSDDKDDILLCDYAGCFRAYHQN
CLLPPIKPEAFPGEEEDWFCWQCECLADCLEILEKEFPQGSKFASWEDVF
PDAKDGAGTGAGEQQGVISLADSDDSDDPNDESFKDDDTRWMSDAESVGS
DEVAKLHSEAADFAESDDNADMGFGGGSSRAGGSRGSRAIERRVKRNAAL
GLSDDGMVEALREKRAIAAALAGNGKIDSANICGRRTRRKRSVDYVKLNE
TVFGDEYVDGDQLSSDAHDPESSEASESESDGSCFSVKPKRQPARRKIPF
IDPLTGQKRKRGRPRKDKGQPGSAIAARWGKPCVDPATGEKRKPGRPRKI
KNGVESDAGMVAVKRKRGRPRKVE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017956AT_hook_DNA-bd_motif
IPR001965Znf_PHD
IPR019787Znf_PHD-finger
IPR013083Znf_RING/FYVE/PHD
IPR019786Zinc_finger_PHD-type_CS
IPR011011Znf_FYVE_PHD