prot_M-pyrifera_M_contig69583.16678.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig69583.16678.1
Unique Nameprot_M-pyrifera_M_contig69583.16678.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length55
Homology
BLAST of mRNA_M-pyrifera_M_contig69583.16678.1 vs. uniprot
Match: A0DDN7_PARTE (RING-type domain-containing protein n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0DDN7_PARTE)

HSP 1 Score: 57.0 bits (136), Expect = 4.540e-8
Identity = 22/36 (61.11%), Postives = 26/36 (72.22%), Query Frame = 0
Query:   10 SRACKHVLCTACWTQWLSKRLECPLCRAKCRERYLI 45
            S  C HV C  CW QWL  +LECPLCRA+ RE++LI
Sbjct:  793 SEKCGHVACQDCWKQWLQTKLECPLCRARVREKFLI 828          
BLAST of mRNA_M-pyrifera_M_contig69583.16678.1 vs. uniprot
Match: A0E8J9_PARTE (RING-type domain-containing protein n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0E8J9_PARTE)

HSP 1 Score: 57.0 bits (136), Expect = 4.540e-8
Identity = 22/36 (61.11%), Postives = 26/36 (72.22%), Query Frame = 0
Query:   10 SRACKHVLCTACWTQWLSKRLECPLCRAKCRERYLI 45
            S  C HV C  CW QWL  +LECPLCRA+ RE++LI
Sbjct:  797 SEKCGHVACQDCWKQWLQTKLECPLCRARVREKFLI 832          
BLAST of mRNA_M-pyrifera_M_contig69583.16678.1 vs. uniprot
Match: A0A2A9M7M1_9APIC (DNA helicase n=1 Tax=Besnoitia besnoiti TaxID=94643 RepID=A0A2A9M7M1_9APIC)

HSP 1 Score: 54.7 bits (130), Expect = 2.990e-7
Identity = 22/42 (52.38%), Postives = 29/42 (69.05%), Query Frame = 0
Query:    6 PWAMSRACKHVLCTACWTQWLSKRLECPLCRAKCRERYLIPS 47
            P   S  C H  C ACWT  L +RLECP+CRA+ RE++L+P+
Sbjct: 1547 PLHRSLNCGHEFCLACWTAQLQRRLECPVCRARTREKHLVPA 1588          
BLAST of mRNA_M-pyrifera_M_contig69583.16678.1 vs. uniprot
Match: F0V878_NEOCL (DNA helicase n=1 Tax=Neospora caninum (strain Liverpool) TaxID=572307 RepID=F0V878_NEOCL)

HSP 1 Score: 53.5 bits (127), Expect = 7.650e-7
Identity = 21/42 (50.00%), Postives = 28/42 (66.67%), Query Frame = 0
Query:    6 PWAMSRACKHVLCTACWTQWLSKRLECPLCRAKCRERYLIPS 47
            P   S  C H  C  CWT+ L  RLECP+CRA+ RE++L+P+
Sbjct: 1628 PLHRSLNCGHEFCLVCWTEQLKNRLECPVCRARTREKHLVPA 1669          
BLAST of mRNA_M-pyrifera_M_contig69583.16678.1 vs. uniprot
Match: F0ZD88_DICPU (RING-type domain-containing protein (Fragment) n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZD88_DICPU)

HSP 1 Score: 48.5 bits (114), Expect = 3.330e-6
Identity = 18/34 (52.94%), Postives = 22/34 (64.71%), Query Frame = 0
Query:   13 CKHVLCTACWTQWLSKRLECPLCRAKCRERYLIP 46
            C HV C  CW QWLS +LECP+CR + R +   P
Sbjct:   17 CNHVCCYECWNQWLSLKLECPVCRERTRVKQCKP 50          
BLAST of mRNA_M-pyrifera_M_contig69583.16678.1 vs. uniprot
Match: D3BQU7_POLPP (RING-type domain-containing protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BQU7_POLPP)

HSP 1 Score: 49.7 bits (117), Expect = 5.100e-6
Identity = 19/34 (55.88%), Postives = 23/34 (67.65%), Query Frame = 0
Query:   13 CKHVLCTACWTQWLSKRLECPLCRAKCRERYLIP 46
            C HV C  CW QWLS +LECP+CR K R + + P
Sbjct:  102 CGHVCCWDCWNQWLSLKLECPICREKTRLKQIKP 135          
BLAST of mRNA_M-pyrifera_M_contig69583.16678.1 vs. uniprot
Match: Q54ML7_DICDI (RING-type domain-containing protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54ML7_DICDI)

HSP 1 Score: 50.4 bits (119), Expect = 9.270e-6
Identity = 18/34 (52.94%), Postives = 22/34 (64.71%), Query Frame = 0
Query:   13 CKHVLCTACWTQWLSKRLECPLCRAKCRERYLIP 46
            C H  C  CW QWLS +LECP+CR +CR +   P
Sbjct:  471 CNHTCCFECWNQWLSLKLECPVCRERCRIKQCKP 504          
BLAST of mRNA_M-pyrifera_M_contig69583.16678.1 vs. uniprot
Match: A0A2C6KJT7_9APIC (Helicase n=1 Tax=Cystoisospora suis TaxID=483139 RepID=A0A2C6KJT7_9APIC)

HSP 1 Score: 48.5 bits (114), Expect = 4.480e-5
Identity = 17/38 (44.74%), Postives = 25/38 (65.79%), Query Frame = 0
Query:   10 SRACKHVLCTACWTQWLSKRLECPLCRAKCRERYLIPS 47
            S  C H  C  CW   L +RLECP+CR + RE++++P+
Sbjct:  738 SLKCGHEFCQTCWLSQLKRRLECPVCRERTREKHIVPA 775          
BLAST of mRNA_M-pyrifera_M_contig69583.16678.1 vs. uniprot
Match: A0A8J4PKK7_9MYCE (RING-type domain-containing protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PKK7_9MYCE)

HSP 1 Score: 48.1 bits (113), Expect = 6.070e-5
Identity = 17/34 (50.00%), Postives = 23/34 (67.65%), Query Frame = 0
Query:   13 CKHVLCTACWTQWLSKRLECPLCRAKCRERYLIP 46
            C H+ C  CW QWLS +LECP+CR + R + + P
Sbjct:  397 CGHICCFECWCQWLSLKLECPVCRERARIKLIKP 430          
BLAST of mRNA_M-pyrifera_M_contig69583.16678.1 vs. uniprot
Match: UPI000644AA0C (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644AA0C)

HSP 1 Score: 47.8 bits (112), Expect = 8.320e-5
Identity = 18/34 (52.94%), Postives = 23/34 (67.65%), Query Frame = 0
Query:   13 CKHVLCTACWTQWLSKRLECPLCRAKCRERYLIP 46
            C H+ C  CW QWLS +LECP+CR K R + + P
Sbjct:  460 CGHICCWECWGQWLSIKLECPVCREKTRLKQVKP 493          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig69583.16678.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0DDN7_PARTE4.540e-861.11RING-type domain-containing protein n=1 Tax=Parame... [more]
A0E8J9_PARTE4.540e-861.11RING-type domain-containing protein n=1 Tax=Parame... [more]
A0A2A9M7M1_9APIC2.990e-752.38DNA helicase n=1 Tax=Besnoitia besnoiti TaxID=9464... [more]
F0V878_NEOCL7.650e-750.00DNA helicase n=1 Tax=Neospora caninum (strain Live... [more]
F0ZD88_DICPU3.330e-652.94RING-type domain-containing protein (Fragment) n=1... [more]
D3BQU7_POLPP5.100e-655.88RING-type domain-containing protein n=1 Tax=Polysp... [more]
Q54ML7_DICDI9.270e-652.94RING-type domain-containing protein n=1 Tax=Dictyo... [more]
A0A2C6KJT7_9APIC4.480e-544.74Helicase n=1 Tax=Cystoisospora suis TaxID=483139 R... [more]
A0A8J4PKK7_9MYCE6.070e-550.00RING-type domain-containing protein n=1 Tax=Polysp... [more]
UPI000644AA0C8.320e-552.94hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..46
e-value: 1.6E-9
score: 39.1
NoneNo IPR availablePFAMPF13923zf-C3HC4_2coord: 9..35
e-value: 7.8E-8
score: 32.0
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 8..42
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 13..36
score: 8.919

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig69583contigM-pyrifera_M_contig69583:439..603 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig69583.16678.1mRNA_M-pyrifera_M_contig69583.16678.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig69583 439..615 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig69583.16678.1 ID=prot_M-pyrifera_M_contig69583.16678.1|Name=mRNA_M-pyrifera_M_contig69583.16678.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=55bp
MDTSGPWAMSRACKHVLCTACWTQWLSKRLECPLCRAKCRERYLIPSPPP
KPPS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING