prot_M-pyrifera_M_contig69514.16666.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig69514.16666.1
Unique Nameprot_M-pyrifera_M_contig69514.16666.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length185
Homology
BLAST of mRNA_M-pyrifera_M_contig69514.16666.1 vs. uniprot
Match: A0A5C3MPZ3_9AGAM (Ribosomal RNA-processing protein 43 n=1 Tax=Heliocybe sulcata TaxID=5364 RepID=A0A5C3MPZ3_9AGAM)

HSP 1 Score: 107 bits (266), Expect = 7.830e-25
Identity = 66/181 (36.46%), Postives = 95/181 (52.49%), Query Frame = 0
Query:    1 MEAGAFKEIRPKEYLFRFLEKGVRPDHRTPDTTRDMIQSVGISTVCHGSSMVRCGETTVVCGIQGMVTSPLEESPREGALEVEVELSRLSEGLSEDTLGFSVLRWQDG--------LCASVRRSYLESGCLDLSGLCIVAGKAVWVLKATVTVLEHGGGVEGVAGYALGLALADTRLPHVT 173
            ++A  F+ + P+ YL RFL + VRPD R  D TRD+  +VG  T   GSS+VR GETTVVCG++  +  P  +SP EG +   ++L  +              R++ G        L   +  +++ SG +D + LCI  GKAVWVL    T + + G     A  A+  AL +TRLP  T
Sbjct:   19 LKAATFQRLHPRIYLERFLAENVRPDGRAFDQTRDVTVNVGSITTADGSSLVRLGETTVVCGVKAEIAEPELDSPDEGYIVPNLDLPAMCSP-----------RFKPGPPSEEAQVLSDRLNEAFIASGIVDPTSLCIHPGKAVWVLYIDATCINYDGNAFDAALIAMVSALRNTRLPKTT 188          
BLAST of mRNA_M-pyrifera_M_contig69514.16666.1 vs. uniprot
Match: A0A165VD55_9AGAM (Ribosomal RNA-processing protein 43 n=1 Tax=Neolentinus lepideus HHB14362 ss-1 TaxID=1314782 RepID=A0A165VD55_9AGAM)

HSP 1 Score: 105 bits (262), Expect = 3.020e-24
Identity = 64/181 (35.36%), Postives = 94/181 (51.93%), Query Frame = 0
Query:    1 MEAGAFKEIRPKEYLFRFLEKGVRPDHRTPDTTRDMIQSVGISTVCHGSSMVRCGETTVVCGIQGMVTSPLEESPREGALEVEVELSRLSEGLSEDTLGFSVLRWQDG--------LCASVRRSYLESGCLDLSGLCIVAGKAVWVLKATVTVLEHGGGVEGVAGYALGLALADTRLPHVT 173
            ++A  F+ + P+ YL RFL + VRPD R  +  RD+  +VG  T   GSS+VR G+TT+VCG++  +  P  +SP EG +   ++L  +              R++ G        L   +  ++L S  +DLS LCI +GKAVWVL    T + + G     A  AL  AL +T LP  T
Sbjct:   19 LKAATFQRLHPRIYLERFLAESVRPDGRALEQARDITVNVGSITTADGSSLVRLGDTTIVCGVKAEIAEPELDSPNEGYIVPNLDLPAICSP-----------RFKPGPPSEEAQVLSDRLNEAFLASKIIDLSSLCIHSGKAVWVLYVDATCINYDGNAFDAALIALVAALRNTHLPKAT 188          
BLAST of mRNA_M-pyrifera_M_contig69514.16666.1 vs. uniprot
Match: S7RZK4_GLOTA (Ribosomal RNA-processing protein 43 (Fragment) n=1 Tax=Gloeophyllum trabeum (strain ATCC 11539 / FP-39264 / Madison 617) TaxID=670483 RepID=S7RZK4_GLOTA)

HSP 1 Score: 102 bits (254), Expect = 4.220e-23
Identity = 63/181 (34.81%), Postives = 93/181 (51.38%), Query Frame = 0
Query:    1 MEAGAFKEIRPKEYLFRFLEKGVRPDHRTPDTTRDMIQSVGISTVCHGSSMVRCGETTVVCGIQGMVTSPLEESPREGALEVEVELSRLSEGLSEDTLGFSVLRWQDG--------LCASVRRSYLESGCLDLSGLCIVAGKAVWVLKATVTVLEHGGGVEGVAGYALGLALADTRLPHVT 173
            ++A  F+ + P+ YL RFL + VRPD R  D  RD+  +VG  T   GSS+VR G+TT+VCG++  +  P  + P EG +   ++L  +              R++ G        L   +  ++L SG +D S L I +GKAVWVL    T + + G     A  A+  AL +TRLP  T
Sbjct:   16 LKAATFQRLHPRIYLERFLAENVRPDGRNVDQWRDVTVNVGSITTADGSSLVRVGDTTIVCGVKAEIAEPELDYPEEGYIVPNLDLPAICSP-----------RFKPGPPSEEAQVLSDRLNEAFLASGIVDTSSLSIRSGKAVWVLYIDATCINYDGNAFDAALIAMVAALRNTRLPRAT 185          
BLAST of mRNA_M-pyrifera_M_contig69514.16666.1 vs. uniprot
Match: A0A1C7NLM7_9FUNG (Ribosomal RNA-processing protein 43 n=1 Tax=Choanephora cucurbitarum TaxID=101091 RepID=A0A1C7NLM7_9FUNG)

HSP 1 Score: 101 bits (251), Expect = 9.630e-23
Identity = 72/186 (38.71%), Postives = 91/186 (48.92%), Query Frame = 0
Query:    6 FKEIRPKEYLFRFLEKGVRPDHRTPDTTRDMIQSVGISTVCHGSSMVRCGETTVVCGIQGMVTSPLEESPREGALEVEVELSRLSEGL------SEDTLGFSVLRWQDGLCASVRRSYLESGCLDLSGLCIVAGKAVWVLKATVTVLEHGGGVEGVAGYALGLALADTRLPHVTPVPGGGVREHPT 185
            F  I+P EYL RFL + VRPD R+    R  + + G  T   GS+MVR G TTVVCGI+  V  P  E+P +G L   VELS L          SE     S L         + + +L+S    L  LCI  GKAVWVL A +  L + G +   +  AL +AL + RLP     P   V   PT
Sbjct:   13 FSRIQPHEYLKRFLGQQVRPDGRSLHEFRKTMITSGSITTADGSAMVRLGGTTVVCGIKAEVCEPKIETPNQGYLVPNVELSPLCSPKFKPGPPSEKAQAISEL---------INQLFLKSHLFPLESLCIEEGKAVWVLYADIVCLNYDGNILDASLLALSIALKNLRLPKAAVSPSLVVEADPT 189          
BLAST of mRNA_M-pyrifera_M_contig69514.16666.1 vs. uniprot
Match: A0A0D7A7Z3_9AGAR (Ribosomal RNA-processing protein 43 n=1 Tax=Fistulina hepatica ATCC 64428 TaxID=1128425 RepID=A0A0D7A7Z3_9AGAR)

HSP 1 Score: 101 bits (251), Expect = 1.160e-22
Identity = 63/175 (36.00%), Postives = 89/175 (50.86%), Query Frame = 0
Query:    1 MEAGAFKEIRPKEYLFRFLEKGVRPDHRTPDTTRDMIQSVGISTVCHGSSMVRCGETTVVCGIQGMVTSPLEESPREGALEVEVELS-----RLSEGLSEDTLGFSVLRWQDGLCASVRRSYLESGCLDLSGLCIVAGKAVWVLKATVTVLEHGGGVEGVAGYALGLALADTRLP 170
            + A  F+ +RP+ YL RF+ + +RPD R  DT RD+  +VG  +  +GSS+VR G TTVVCG++  +  P  +SP++G L   V+L      +   G   D            L   +  +   S  L LS LCI  GKAVW L    T + H G     A  A+  AL +T+LP
Sbjct:    9 LRASVFQRLRPRAYLERFVAESIRPDGREFDTWRDVSVNVGSVSTANGSSLVRIGNTTVVCGVKAEIAEPDLDSPKDGFLVPNVDLPAICSPKFKPGPPTDEAQV--------LSERLNSTLTLSNILPLSSLCIQEGKAVWALYVDATCINHDGNAFDAALIAMVAALRNTKLP 175          
BLAST of mRNA_M-pyrifera_M_contig69514.16666.1 vs. uniprot
Match: UPI001EE543AB (exosome complex component RRP43-like n=2 Tax=Haliotis TaxID=6452 RepID=UPI001EE543AB)

HSP 1 Score: 100 bits (249), Expect = 4.790e-22
Identity = 63/170 (37.06%), Postives = 86/170 (50.59%), Query Frame = 0
Query:    3 AGAFKEIRPKEYLFRFLEKGVRPDHRTPDTTRDMIQSVGISTVCHGSSMVRCGETTVVCGIQGMVTSPLEESPREGALEVEVELSRLSEGLSEDTLGFSVLRWQDGLCASVRRSYLESGCLDLSGLCIVAGKAVWVLKATVTVLEHGGGVEGVAGYALGLALADTRLPHV 172
            A  FK   P+EY  RFLEK VRPD R     R  + ++G  T   GSS+VR G TTV+CGI+  + +P  ++P++G +   VELS L              +    L A V  S   S C++L  LC+V  K VWVL   +  L + G +      AL  A  +T+LP V
Sbjct:   61 AADFKTAHPREYYRRFLEKDVRPDGRELGEFRSTVLNIGCVTTAEGSSLVRLGNTTVMCGIKAELATPKTDAPKQGYIVPNVELSPLCSPQFRPGPPGEQAQVLSQLMAEVVSS---SNCIELEDLCVVPHKLVWVLHCDMVCLNYDGNITDACVLALLAAFRNTQLPGV 227          
BLAST of mRNA_M-pyrifera_M_contig69514.16666.1 vs. uniprot
Match: A0A6A5BK23_NAEFO (Ribosomal RNA-processing protein 43 n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5BK23_NAEFO)

HSP 1 Score: 99.4 bits (246), Expect = 5.370e-22
Identity = 66/178 (37.08%), Postives = 98/178 (55.06%), Query Frame = 0
Query:    1 MEAGAFKEIRPKEYLFRFLEKGVRPDHRTPDTTRDMIQSVGISTVCHGSSMVRCGETTVVCGIQGMVTSPLEESPREGALEVEVELSRLSEGLSEDTLGFSVLRWQD---GLCASVRR-SYLESGC--LDLSGLCIVAGKAVWVLKATVTVLEHGGGVEGVAGYALGLALADTRLPHV 172
            ++A AF+++ P E+  +FL +G+RPD R+ +  R+ + S G    C GSS+V+ G T+VVCGI+  V  P EE+PR+G + +  +   +    + D  G     W++     C   +R + +   C  LDLS LCI  GKA WVL A +  LE+ G V   A  AL  AL +  LP V
Sbjct:    5 LDAEAFRKVHPLEFYKKFLPEGIRPDGRSLNMIRESLISSGSLRNCEGSSLVKTGNTSVVCGIKAEVMIPTEEAPRDGRVVISFDFPSIC---ASDVTG----NWEEVNERKCTIQQRLASVLYNCEVLDLSQLCIEEGKASWVLYADLYCLENDGNVFDAALIALLTALRNVSLPKV 175          
BLAST of mRNA_M-pyrifera_M_contig69514.16666.1 vs. uniprot
Match: A0A1A5ZWK4_9TREE (Ribosomal RNA-processing protein 43 n=1 Tax=Kwoniella dejecticola CBS 10117 TaxID=1296121 RepID=A0A1A5ZWK4_9TREE)

HSP 1 Score: 99.4 bits (246), Expect = 9.940e-22
Identity = 62/169 (36.69%), Postives = 87/169 (51.48%), Query Frame = 0
Query:    3 AGAFKEIRPKEYLFRFLEKGVRPDHRTPDTTRDMIQSVGISTVCHGSSMVRCGETTVVCGIQGMVTSPLEESPREGALEVEVELSRL-SEGLSEDTLGFSVLRWQDGLCASVRRSYLESGCLDLSGLCIVAGKAVWVLKATVTVLEHGGGVEGVAGYALGLALADTRLP 170
            A  FK++ P +YL RFL KG RPD R     RD+  +VG  +  HGSS+VR G+TT+VCGI+  +  P  ++P EG +   ++L  L S        G     + + L        + S  L  S L I +GKAVWV+   V  + + G     A  A+  AL +TRLP
Sbjct:   31 AEVFKKLHPSQYLSRFLNKGYRPDGRKLKAWRDVSINVGSVSTAHGSSLVRMGDTTMVCGIKAEIAEPTAQAPNEGYVVPNIDLPALCSPNFKPGPPGDEAQTYSNWL----NDLLVSSSTLPPSSLVIASGKAVWVIYIDVVCINYDGNAFDAAVLAVMAALKNTRLP 195          
BLAST of mRNA_M-pyrifera_M_contig69514.16666.1 vs. uniprot
Match: A0A397JNE6_9GLOM (Ribosomal RNA-processing protein 43 n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397JNE6_9GLOM)

HSP 1 Score: 97.8 bits (242), Expect = 2.210e-21
Identity = 64/172 (37.21%), Postives = 90/172 (52.33%), Query Frame = 0
Query:    2 EAGAFKEIRPKEYLFRFLEKGVRPDHRTPDTTRDMIQSVGISTVCHGSSMVRCGETTVVCGIQGMVTSPLEESPREGALEVEVELSRLSEGLSEDTLGFSVLRWQDGLCASVRRSYLESGCLDLSGLCIVAGKAVWVLKATVTVLEHGGGVEGVAGYALGLALADTRLPHVT 173
            EA  F++++P+EYL +FL K VRPD R     R    ++G  +  +GSS+VR G TTVVCGI+  V+ P + S +EG L   VELS +    S              L  ++ R    +  LDL+ LCI  G AVWVL A +  + + G V       L  AL++ +LP  T
Sbjct:    7 EAETFRKLQPQEYLRKFLLKEVRPDGRELKQFRQTTVNLGCISTTNGSSLVRIGNTTVVCGIKAEVSVPKQTSTKEGYLVPNVELSPMC---SPKFKPGPPSEHAQVLSENINRLLKSASILDLNTLCIHEGSAVWVLYADIVCVNYDGNVFDACVIGLITALSNVKLPKAT 175          
BLAST of mRNA_M-pyrifera_M_contig69514.16666.1 vs. uniprot
Match: D2UXP2_NAEGR (Ribosomal RNA-processing protein 43 n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2UXP2_NAEGR)

HSP 1 Score: 97.1 bits (240), Expect = 4.100e-21
Identity = 62/179 (34.64%), Postives = 96/179 (53.63%), Query Frame = 0
Query:    1 MEAGAFKEIRPKEYLFRFLEKGVRPDHRTPDTTRDMIQSVGISTVCHGSSMVRCGETTVVCGIQGMVTSPLEESPREGALEVEVELSRLSEGLSEDTLGFSVLRWQDGLCASVRRSYLES---------GCLDLSGLCIVAGKAVWVLKATVTVLEHGGGVEGVAGYALGLALADTRLP 170
            ++A AF+++ P E+  +FL +GVRPD R  +  R+ + S G    C GSS+V+ G T+VVCGI+  V  P E++P+ G + +  +   +    + D  G     W++    + ++S ++            +DLS LCI  GKAVWVL A +  LE+ G V   A  AL  AL +  LP
Sbjct:    5 LDAEAFRKVHPLEFYNKFLPEGVRPDGRPLNMIRETVVSSGSLGNCEGSSLVKTGNTSVVCGIKAEVMIPTEDAPKNGKVVISFDFPSIC---AADVTG----NWEE---INEKKSVIQQRLAGIFYNCNVMDLSQLCIEEGKAVWVLYADLYCLENDGNVFDAALIALLTALKNVSLP 173          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig69514.16666.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5C3MPZ3_9AGAM7.830e-2536.46Ribosomal RNA-processing protein 43 n=1 Tax=Helioc... [more]
A0A165VD55_9AGAM3.020e-2435.36Ribosomal RNA-processing protein 43 n=1 Tax=Neolen... [more]
S7RZK4_GLOTA4.220e-2334.81Ribosomal RNA-processing protein 43 (Fragment) n=1... [more]
A0A1C7NLM7_9FUNG9.630e-2338.71Ribosomal RNA-processing protein 43 n=1 Tax=Choane... [more]
A0A0D7A7Z3_9AGAR1.160e-2236.00Ribosomal RNA-processing protein 43 n=1 Tax=Fistul... [more]
UPI001EE543AB4.790e-2237.06exosome complex component RRP43-like n=2 Tax=Halio... [more]
A0A6A5BK23_NAEFO5.370e-2237.08Ribosomal RNA-processing protein 43 n=2 Tax=Naegle... [more]
A0A1A5ZWK4_9TREE9.940e-2236.69Ribosomal RNA-processing protein 43 n=1 Tax=Kwonie... [more]
A0A397JNE6_9GLOM2.210e-2137.21Ribosomal RNA-processing protein 43 n=1 Tax=Divers... [more]
D2UXP2_NAEGR4.100e-2134.64Ribosomal RNA-processing protein 43 n=1 Tax=Naegle... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027408PNPase/RNase PH domain superfamilyGENE3D3.30.230.70coord: 2..184
e-value: 1.1E-41
score: 145.1
IPR001247Exoribonuclease, phosphorolytic domain 1PFAMPF01138RNase_PHcoord: 34..170
e-value: 1.8E-15
score: 57.6
NoneNo IPR availablePANTHERPTHR11097EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEINcoord: 12..174
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 5..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig69514contigM-pyrifera_M_contig69514:433..1184 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig69514.16666.1mRNA_M-pyrifera_M_contig69514.16666.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig69514 433..1184 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig69514.16666.1 ID=prot_M-pyrifera_M_contig69514.16666.1|Name=mRNA_M-pyrifera_M_contig69514.16666.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=185bp
MEAGAFKEIRPKEYLFRFLEKGVRPDHRTPDTTRDMIQSVGISTVCHGSS
MVRCGETTVVCGIQGMVTSPLEESPREGALEVEVELSRLSEGLSEDTLGF
SVLRWQDGLCASVRRSYLESGCLDLSGLCIVAGKAVWVLKATVTVLEHGG
GVEGVAGYALGLALADTRLPHVTPVPGGGVREHPT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027408PNPase/RNase_PH_dom_sf
IPR001247ExoRNase_PH_dom1
IPR020568Ribosomal_S5_D2-typ_fold