prot_M-pyrifera_M_contig69514.16665.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig69514.16665.1
Unique Nameprot_M-pyrifera_M_contig69514.16665.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length82
Homology
BLAST of mRNA_M-pyrifera_M_contig69514.16665.1 vs. uniprot
Match: A0A3S3SG01_9ACAR (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Dinothrombium tinctorium TaxID=1965070 RepID=A0A3S3SG01_9ACAR)

HSP 1 Score: 58.9 bits (141), Expect = 2.800e-8
Identity = 34/80 (42.50%), Postives = 46/80 (57.50%), Query Frame = 0
Query:    3 HGLRIVTWNV-GLRGLVRTAVFFGGMEGMFTAVGMPDVLCFQEVKVPMSEIDEPVAFVPGYRAFFHFSG-KPMYAGVVTY 80
            + L+IVTWNV GLR    T +       +       D+ CFQE K+  ++ID+ +AFVP Y A+F F   K  Y+GVVTY
Sbjct:    2 NSLKIVTWNVNGLRSAKHTVLQMLESHDV-------DIYCFQETKISRNQIDDSIAFVPDYSAYFSFPKVKSGYSGVVTY 74          
BLAST of mRNA_M-pyrifera_M_contig69514.16665.1 vs. uniprot
Match: A0A482R265_9EURY (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Methanosarcinales archaeon TaxID=2250255 RepID=A0A482R265_9EURY)

HSP 1 Score: 55.8 bits (133), Expect = 1.400e-7
Identity = 37/83 (44.58%), Postives = 48/83 (57.83%), Query Frame = 0
Query:    4 GLRIVTWNVGLRGLVRT-AVFFGGMEGMFTAVGMPDVLCFQEVKVPM-SEIDEPVAFVPGYRAFF--HFSGKPMYAGVVTYVR 82
            G+R+V+WN+GL+GL RT A   GG       +   DVLC QE K    S++DE  A   G  +FF  H +GK  Y+GV T VR
Sbjct:  103 GVRVVSWNIGLKGLHRTLASVAGGRLATLLDMLHADVLCLQETKHGRRSDLDEEDALCAGCTSFFSAHHAGK-QYSGVATIVR 184          
BLAST of mRNA_M-pyrifera_M_contig69514.16665.1 vs. uniprot
Match: A0A356J8I8_9BACT (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Candidatus Uhrbacteria bacterium TaxID=2053634 RepID=A0A356J8I8_9BACT)

HSP 1 Score: 53.1 bits (126), Expect = 5.560e-7
Identity = 29/83 (34.94%), Postives = 46/83 (55.42%), Query Frame = 0
Query:    5 LRIVTWNV-GLRGLVRTAVFFGGMEGMFT---AVGMPDVLCFQEVKVPMSEIDEPVAFVPGYRAFF-HFSGKPMYAGVVTYVR 82
            ++I++WN  GLR  V+        +G FT   A   PD++CFQE K  + ++DE    + GY ++F H  G+  Y+GV  Y +
Sbjct:    1 MKIISWNTNGLRATVK--------QGNFTPLFAFNNPDIVCFQETKCEIDQLDEKTRNLKGYHSYFSHSKGRKGYSGVAMYTK 75          
BLAST of mRNA_M-pyrifera_M_contig69514.16665.1 vs. uniprot
Match: G1KKZ7_ANOCA (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Anolis carolinensis TaxID=28377 RepID=G1KKZ7_ANOCA)

HSP 1 Score: 53.9 bits (128), Expect = 1.650e-6
Identity = 31/80 (38.75%), Postives = 49/80 (61.25%), Query Frame = 0
Query:    5 LRIVTWNV-GLRGLVRTAVFFGGMEGMFTAVGMPDVLCFQEVKVPMSEIDEPVAFVPGYRAFFHFSG-KPMYAGVVTYVR 82
            +R+++WNV GLR     A    G++ +  A+G  DV+C QE K+    ++EP+A V GY A+F FS  +  Y+GV T+ +
Sbjct:    1 MRLLSWNVNGLRAGAGAA----GLKPLLDALGA-DVICLQETKITRDLLEEPLAVVEGYNAYFSFSRTRSGYSGVATFCK 75          
BLAST of mRNA_M-pyrifera_M_contig69514.16665.1 vs. uniprot
Match: A0A1W0WI20_HYPDU (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Hypsibius dujardini TaxID=232323 RepID=A0A1W0WI20_HYPDU)

HSP 1 Score: 53.9 bits (128), Expect = 1.660e-6
Identity = 33/83 (39.76%), Postives = 47/83 (56.63%), Query Frame = 0
Query:    5 LRIVTWNVG----LRGLVRTAVFFGGMEGMFTAVGMPDVLCFQEVKVPMSEIDEPVAFVPGYRAFFHFSGKPM-YAGVVTYVR 82
            ++IVTWN+     +RG ++T +        F A    D++C QE KV    +DE +A V GY A+F +S K   Y+GVVTY R
Sbjct:    1 MKIVTWNINGIRTVRGPLKTLL------DSFDA----DIICLQETKVTREMLDEGIAVVDGYNAYFSYSRKKSGYSGVVTYCR 73          
BLAST of mRNA_M-pyrifera_M_contig69514.16665.1 vs. uniprot
Match: A0A358F7U4_9BACT (Exodeoxyribonuclease III n=1 Tax=Candidatus Nomurabacteria bacterium TaxID=2052152 RepID=A0A358F7U4_9BACT)

HSP 1 Score: 53.1 bits (126), Expect = 2.500e-6
Identity = 29/83 (34.94%), Postives = 46/83 (55.42%), Query Frame = 0
Query:    5 LRIVTWNV-GLRGLVRTAVFFGGMEGMFT---AVGMPDVLCFQEVKVPMSEIDEPVAFVPGYRAFF-HFSGKPMYAGVVTYVR 82
            ++I++WN  GLR  V+        +G FT   A   PD++CFQE K  + ++DE    + GY ++F H  G+  Y+GV  Y +
Sbjct:    1 MKIISWNTNGLRATVK--------QGNFTPLFAFNNPDIVCFQETKCEIDQLDEKTRNLKGYHSYFSHSKGRKGYSGVAMYTK 75          
BLAST of mRNA_M-pyrifera_M_contig69514.16665.1 vs. uniprot
Match: A0A0L6ZBA4_9CLOT (Exodeoxyribonuclease n=1 Tax=Clostridium homopropionicum DSM 5847 TaxID=1121318 RepID=A0A0L6ZBA4_9CLOT)

HSP 1 Score: 52.0 bits (123), Expect = 6.220e-6
Identity = 26/79 (32.91%), Postives = 47/79 (59.49%), Query Frame = 0
Query:    5 LRIVTWNV-GLRGLVRTAVFFGGMEGMFTAVGMPDVLCFQEVKVPMSEIDEPVAFVPGYRAFFHFSGKPMYAGVVTYVR 82
            +++ +WNV GLR + +     G ++ ++     PD+LC QE K+ + +IDE    + GY+A+F  + K  Y+GV T+ +
Sbjct:    1 MKVYSWNVNGLRAIEKK----GFIQWIYDE--KPDILCIQESKIQLDQIDEKFKSIKGYKAYFSCAEKKGYSGVATFTK 73          
BLAST of mRNA_M-pyrifera_M_contig69514.16665.1 vs. uniprot
Match: A0A1D1VKU5_RAMVA (DNA-(apurinic or apyrimidinic site) endonuclease 2 n=1 Tax=Ramazzottius varieornatus TaxID=947166 RepID=A0A1D1VKU5_RAMVA)

HSP 1 Score: 50.1 bits (118), Expect = 3.780e-5
Identity = 32/79 (40.51%), Postives = 46/79 (58.23%), Query Frame = 0
Query:    5 LRIVTWNVGLRGLVRTAVFFGGMEGMFTAVGMPDVLCFQEVKVPMSEIDEPVAFVPGYRAFFHFSGKPM-YAGVVTYVR 82
            ++IVTWN+     +RTA   G ++ +  +    DV+C QE KV  S +D+ +A V GY A+F  S K   Y+GV TY R
Sbjct:    1 MKIVTWNING---IRTAR--GPLKSLLDSFDA-DVICLQETKVARSMLDQTIAEVDGYSAYFSCSRKRGGYSGVATYCR 73          
BLAST of mRNA_M-pyrifera_M_contig69514.16665.1 vs. uniprot
Match: UPI000F8DBAF2 (exodeoxyribonuclease III n=1 Tax=Muricauda beolgyonensis TaxID=864064 RepID=UPI000F8DBAF2)

HSP 1 Score: 49.7 bits (117), Expect = 4.280e-5
Identity = 30/73 (41.10%), Postives = 45/73 (61.64%), Query Frame = 0
Query:    5 LRIVTWNV-GLRGLVRTAVFFGGMEGMFTAVGMPDVLCFQEVKVPMSEIDEPVAFVPGYRAFFHFSGKPMYAG 76
            +RIV+WNV G+R + +   FF  ++    A+G PDVLC QE K    E++  +A + GY AFF+ + K  Y+G
Sbjct:    1 MRIVSWNVNGIRAVAKKD-FFKNID----ALG-PDVLCLQETKAQDHEVENELAKMTGYEAFFNSAEKKGYSG 67          
BLAST of mRNA_M-pyrifera_M_contig69514.16665.1 vs. uniprot
Match: M7NV45_9GAMM (Exodeoxyribonuclease III n=1 Tax=Methylophaga lonarensis MPL TaxID=1286106 RepID=M7NV45_9GAMM)

HSP 1 Score: 49.7 bits (117), Expect = 4.320e-5
Identity = 28/79 (35.44%), Postives = 41/79 (51.90%), Query Frame = 0
Query:    5 LRIVTWNV-GLRGLVRTAVFFGGMEGMFTAVGMPDVLCFQEVKVPMSEIDEPVAFVPGYRAFFHFSGKPMYAGVVTYVR 82
            +RI+T NV G+R   R   F       + A    DV+C QE K  + ++D+P+    GY  F+H + K  Y+GV  Y R
Sbjct:    1 MRIITVNVNGIRAAARKGFFD------WLAKQNADVVCIQETKAQLPQLDDPIYHPTGYHCFYHDAEKKGYSGVAIYSR 73          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig69514.16665.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A3S3SG01_9ACAR2.800e-842.50DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
A0A482R265_9EURY1.400e-744.58Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A356J8I8_9BACT5.560e-734.94Endo/exonuclease/phosphatase domain-containing pro... [more]
G1KKZ7_ANOCA1.650e-638.75DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
A0A1W0WI20_HYPDU1.660e-639.76DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
A0A358F7U4_9BACT2.500e-634.94Exodeoxyribonuclease III n=1 Tax=Candidatus Nomura... [more]
A0A0L6ZBA4_9CLOT6.220e-632.91Exodeoxyribonuclease n=1 Tax=Clostridium homopropi... [more]
A0A1D1VKU5_RAMVA3.780e-540.51DNA-(apurinic or apyrimidinic site) endonuclease 2... [more]
UPI000F8DBAF24.280e-541.10exodeoxyribonuclease III n=1 Tax=Muricauda beolgyo... [more]
M7NV45_9GAMM4.320e-535.44Exodeoxyribonuclease III n=1 Tax=Methylophaga lona... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10coord: 1..82
e-value: 8.4E-15
score: 56.9
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 5..82
IPR004808AP endonuclease 1PANTHERPTHR22748AP ENDONUCLEASEcoord: 5..82
NoneNo IPR availablePANTHERPTHR22748:SF4DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE 2coord: 5..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig69514contigM-pyrifera_M_contig69514:3..248 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig69514.16665.1mRNA_M-pyrifera_M_contig69514.16665.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig69514 3..248 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig69514.16665.1 ID=prot_M-pyrifera_M_contig69514.16665.1|Name=mRNA_M-pyrifera_M_contig69514.16665.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=82bp
MKHGLRIVTWNVGLRGLVRTAVFFGGMEGMFTAVGMPDVLCFQEVKVPMS
EIDEPVAFVPGYRAFFHFSGKPMYAGVVTYVR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf
IPR004808AP_endonuc_1