prot_M-pyrifera_M_contig6951.16661.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig6951.16661.1
Unique Nameprot_M-pyrifera_M_contig6951.16661.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length80
Homology
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BLAST of mRNA_M-pyrifera_M_contig6951.16661.1 vs. uniprot
Match: A0A6H5JRN1_9PHAE (CYTOSOL_AP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRN1_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 2.220e-17
Identity = 48/77 (62.34%), Postives = 53/77 (68.83%), Query Frame = 0 
Query:    4 ALSRRGGGVAXXXXXXGGASDVKPVPHLSVADMTYTPESKVEISASAVSDAGAWEGDTLVLLAFEQEDKEALAVIAG 80
            ALS RGGGV       G A+   PVP LSV DM YT ESK  +S S VS A +WEGD LVLLAF+QEDKEA AV+AG
Sbjct:   94 ALSTRGGGVVAMMSTSGAAT---PVPPLSVGDMCYTAESKASVSVSPVSKADSWEGDMLVLLAFQQEDKEAFAVLAG 167
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6951.16661.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JRN1_9PHAE2.220e-1762.34CYTOSOL_AP domain-containing protein n=2 Tax=Ectoc... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig6951contigM-pyrifera_M_contig6951:472..2456 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig6951.16661.1mRNA_M-pyrifera_M_contig6951.16661.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig6951 470..2456 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig6951.16661.1 ID=prot_M-pyrifera_M_contig6951.16661.1|Name=mRNA_M-pyrifera_M_contig6951.16661.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=80bp
VWSALSRRGGGVAMMSSSSGGASDVKPVPHLSVADMTYTPESKVEISASA
VSDAGAWEGDTLVLLAFEQEDKEALAVIAG
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