prot_M-pyrifera_M_contig67872.16372.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig67872.16372.1
Unique Nameprot_M-pyrifera_M_contig67872.16372.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length75
Homology
BLAST of mRNA_M-pyrifera_M_contig67872.16372.1 vs. uniprot
Match: D8LCK6_ECTSI (Protein transport protein SEC23 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCK6_ECTSI)

HSP 1 Score: 155 bits (391), Expect = 2.670e-42
Identity = 68/75 (90.67%), Postives = 73/75 (97.33%), Query Frame = 0
Query:    1 MDVWDVRGAEERDAVRFSWNVWPSSRLEATRVVVPVGCLYSPMKSRHDAPPPLSYDPVRCNGCGAILNPYAQVRF 75
            M+VWDV GAEERDAVRFSWNVWPSSRLEATR+VVPVGCLY+PMKSRHDAPPPL+YDP+RCNGCGAILNPYAQV F
Sbjct:    1 MEVWDVLGAEERDAVRFSWNVWPSSRLEATRIVVPVGCLYTPMKSRHDAPPPLAYDPIRCNGCGAILNPYAQVDF 75          
BLAST of mRNA_M-pyrifera_M_contig67872.16372.1 vs. uniprot
Match: A0A7S2Y1K9_9STRA (Protein transport protein SEC23 (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1K9_9STRA)

HSP 1 Score: 129 bits (325), Expect = 6.710e-36
Identity = 55/75 (73.33%), Postives = 63/75 (84.00%), Query Frame = 0
Query:    1 MDVWDVRGAEERDAVRFSWNVWPSSRLEATRVVVPVGCLYSPMKSRHDAPPPLSYDPVRCNGCGAILNPYAQVRF 75
            M+ WD   AEERD  RFSWNVWPSSRLEATR+VVPVGCLY+P+K   + PPPL+YDP+RCNGCGAILNPY Q+ F
Sbjct:    1 MEGWDWGAAEERDGARFSWNVWPSSRLEATRIVVPVGCLYTPLKRLENMPPPLAYDPIRCNGCGAILNPYCQIDF 75          
BLAST of mRNA_M-pyrifera_M_contig67872.16372.1 vs. uniprot
Match: A0A7S4D7Q8_HETAK (Protein transport protein SEC23 (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D7Q8_HETAK)

HSP 1 Score: 124 bits (310), Expect = 6.230e-34
Identity = 51/75 (68.00%), Postives = 61/75 (81.33%), Query Frame = 0
Query:    1 MDVWDVRGAEERDAVRFSWNVWPSSRLEATRVVVPVGCLYSPMKSRHDAPPPLSYDPVRCNGCGAILNPYAQVRF 75
            M+ WDV  AEERD  RFSWNVWPSS+LEATR+VVP+GCLY+P+K     PP L+YDP+RCNGCG ILNP+ Q+ F
Sbjct:    1 MEGWDVHAAEERDGARFSWNVWPSSKLEATRIVVPLGCLYTPLKKIEGMPPALAYDPIRCNGCGGILNPFCQIDF 75          
BLAST of mRNA_M-pyrifera_M_contig67872.16372.1 vs. uniprot
Match: A0A835YT42_9STRA (Protein transport protein SEC23 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT42_9STRA)

HSP 1 Score: 127 bits (318), Expect = 2.440e-32
Identity = 53/72 (73.61%), Postives = 62/72 (86.11%), Query Frame = 0
Query:    4 WDVRGAEERDAVRFSWNVWPSSRLEATRVVVPVGCLYSPMKSRHDAPPPLSYDPVRCNGCGAILNPYAQVRF 75
            WD++G EERD VRFSWNVWPSS+LEATR+VVP GCLYSP+K     PP L+YDP+RCNGCGAILNPYAQ+ +
Sbjct:   10 WDLQGNEERDGVRFSWNVWPSSKLEATRIVVPTGCLYSPLKRLEGMPPALAYDPIRCNGCGAILNPYAQIDY 81          
BLAST of mRNA_M-pyrifera_M_contig67872.16372.1 vs. uniprot
Match: A0A482RVW2_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RVW2_9ARCH)

HSP 1 Score: 112 bits (281), Expect = 3.070e-31
Identity = 46/70 (65.71%), Postives = 55/70 (78.57%), Query Frame = 0
Query:    1 MDVWDVRGAEERDAVRFSWNVWPSSRLEATRVVVPVGCLYSPMKSRHDAPPPLSYDPVRCNGCGAILNPY 70
            M  WD  G E+RD VRFSWNVWP++RLEATR+V P+GC+YSP+K     P  L+YDP+RCNGC AILNPY
Sbjct:    1 MQQWDFYGPEQRDGVRFSWNVWPTTRLEATRIVAPIGCMYSPLKKIEGMPDSLAYDPIRCNGCSAILNPY 70          
BLAST of mRNA_M-pyrifera_M_contig67872.16372.1 vs. uniprot
Match: A0A7S3HKU0_9STRA (Protein transport protein SEC23 (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HKU0_9STRA)

HSP 1 Score: 114 bits (284), Expect = 2.260e-30
Identity = 47/72 (65.28%), Postives = 57/72 (79.17%), Query Frame = 0
Query:    4 WDVRGAEERDAVRFSWNVWPSSRLEATRVVVPVGCLYSPMKSRHDAPPPLSYDPVRCNGCGAILNPYAQVRF 75
            WD  G E+RD +R SWN WPSSR+EATR+VVP+GCLYSP+K   + P  L+YDP+RCNGC A+LNPY QV F
Sbjct:    5 WDFHGPEQRDGIRNSWNTWPSSRIEATRIVVPLGCLYSPLKRIENMPGSLAYDPIRCNGCTAVLNPYVQVDF 76          
BLAST of mRNA_M-pyrifera_M_contig67872.16372.1 vs. uniprot
Match: F0XWM5_AURAN (Protein transport protein SEC23 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWM5_AURAN)

HSP 1 Score: 114 bits (285), Expect = 7.080e-28
Identity = 49/75 (65.33%), Postives = 61/75 (81.33%), Query Frame = 0
Query:    1 MDVWDVRGAEERDAVRFSWNVWPSSRLEATRVVVPVGCLYSPMKSRHDAPPPLSYDPVRCNGCGAILNPYAQVRF 75
            MD+  ++  EERD VR SWNVWPSSRLEATR+V+P+G LY+P+K   + PPPL YDP+RCNGCGA+LNPY QV +
Sbjct:    1 MDISSIQAQEERDGVRLSWNVWPSSRLEATRIVIPIGALYTPLKPIGN-PPPLIYDPIRCNGCGALLNPYCQVDY 74          
BLAST of mRNA_M-pyrifera_M_contig67872.16372.1 vs. uniprot
Match: A0A8J2WHU7_9STRA (Protein transport protein SEC23 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WHU7_9STRA)

HSP 1 Score: 114 bits (284), Expect = 9.650e-28
Identity = 50/75 (66.67%), Postives = 61/75 (81.33%), Query Frame = 0
Query:    1 MDVWDVRGAEERDAVRFSWNVWPSSRLEATRVVVPVGCLYSPMKSRHDAPPPLSYDPVRCNGCGAILNPYAQVRF 75
            MD+  ++  EERD VR SWNVWPSSRLEATR+VVP+G LY+P+K   + PPPL YDP+RCNGCGA+LNPY Q+ F
Sbjct:    1 MDMSSIQAQEERDGVRLSWNVWPSSRLEATRIVVPIGALYTPLKPIGN-PPPLVYDPIRCNGCGALLNPYCQLDF 74          
BLAST of mRNA_M-pyrifera_M_contig67872.16372.1 vs. uniprot
Match: A0A6U3YQE8_9STRA (Protein transport protein SEC23 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3YQE8_9STRA)

HSP 1 Score: 114 bits (284), Expect = 9.670e-28
Identity = 50/76 (65.79%), Postives = 57/76 (75.00%), Query Frame = 0
Query:    2 DVWDVRGAEERDAVRFSWNVWPSSRLEATRVVVPVGCLYSPMKSRHDAPPP--LSYDPVRCNGCGAILNPYAQVRF 75
            + WDV   EERD  R SWNVWPSSRLEATR+VVPVGCLY+P+K     PP   L YDP+RCN CGA+LNPY Q+ F
Sbjct:   14 EPWDVLAMEERDGARLSWNVWPSSRLEATRIVVPVGCLYTPLKRLGSMPPTGALPYDPIRCNNCGAVLNPYCQIDF 89          
BLAST of mRNA_M-pyrifera_M_contig67872.16372.1 vs. uniprot
Match: T1HWT2_RHOPR (Protein transport protein SEC23 n=1 Tax=Rhodnius prolixus TaxID=13249 RepID=T1HWT2_RHOPR)

HSP 1 Score: 102 bits (255), Expect = 1.420e-26
Identity = 48/72 (66.67%), Postives = 58/72 (80.56%), Query Frame = 0
Query:    6 VRGAEERDAVRFSWNVWPSSRLEATRVVVPVGCLYSPMKSRHDAPPPLSYDPVRC--NGCGAILNPYAQVRF 75
            ++ +EERD +RF+WNVWPSSRLEATR+VVPVGCLY P+K R+D PP L YDPV+C  N C AILNP  QV +
Sbjct:    8 IQQSEERDGIRFTWNVWPSSRLEATRLVVPVGCLYQPLKERYDLPPIL-YDPVQCTRNTCRAILNPMCQVDY 78          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig67872.16372.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCK6_ECTSI2.670e-4290.67Protein transport protein SEC23 n=2 Tax=Ectocarpus... [more]
A0A7S2Y1K9_9STRA6.710e-3673.33Protein transport protein SEC23 (Fragment) n=1 Tax... [more]
A0A7S4D7Q8_HETAK6.230e-3468.00Protein transport protein SEC23 (Fragment) n=1 Tax... [more]
A0A835YT42_9STRA2.440e-3273.61Protein transport protein SEC23 n=1 Tax=Tribonema ... [more]
A0A482RVW2_9ARCH3.070e-3165.71Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S3HKU0_9STRA2.260e-3065.28Protein transport protein SEC23 (Fragment) n=1 Tax... [more]
F0XWM5_AURAN7.080e-2865.33Protein transport protein SEC23 n=1 Tax=Aureococcu... [more]
A0A8J2WHU7_9STRA9.650e-2866.67Protein transport protein SEC23 n=1 Tax=Pelagomona... [more]
A0A6U3YQE8_9STRA9.670e-2865.79Protein transport protein SEC23 n=1 Tax=Dictyocha ... [more]
T1HWT2_RHOPR1.420e-2666.67Protein transport protein SEC23 n=1 Tax=Rhodnius p... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.40.1670coord: 4..75
e-value: 1.2E-22
score: 82.6
NoneNo IPR availablePANTHERPTHR11141:SF10PROTEIN TRANSPORT PROTEIN SEC23Bcoord: 8..75
NoneNo IPR availableSUPERFAMILY81995beta-sandwich domain of Sec23/24coord: 7..69
IPR037364Protein transport protein Sec23PANTHERPTHR11141PROTEIN TRANSPORT PROTEIN SEC23coord: 8..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig67872contigM-pyrifera_M_contig67872:886..1110 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig67872.16372.1mRNA_M-pyrifera_M_contig67872.16372.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig67872 886..1110 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig67872.16372.1 ID=prot_M-pyrifera_M_contig67872.16372.1|Name=mRNA_M-pyrifera_M_contig67872.16372.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=75bp
MDVWDVRGAEERDAVRFSWNVWPSSRLEATRVVVPVGCLYSPMKSRHDAP
PPLSYDPVRCNGCGAILNPYAQVRF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037364Sec23