prot_M-pyrifera_M_contig67800.16361.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig67800.16361.1
Unique Nameprot_M-pyrifera_M_contig67800.16361.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length50
Homology
BLAST of mRNA_M-pyrifera_M_contig67800.16361.1 vs. uniprot
Match: D8LEI3_ECTSI (CAF1C_H4-bd domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEI3_ECTSI)

HSP 1 Score: 100 bits (250), Expect = 1.290e-24
Identity = 47/48 (97.92%), Postives = 48/48 (100.00%), Query Frame = 0
Query:    2 VKINHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVPPANSG 49
            VKINHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVPP+NSG
Sbjct:   28 VKINHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVPPSNSG 75          
BLAST of mRNA_M-pyrifera_M_contig67800.16361.1 vs. uniprot
Match: A0A6H5JAT4_9PHAE (CAF1C_H4-bd domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAT4_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 1.010e-23
Identity = 47/48 (97.92%), Postives = 48/48 (100.00%), Query Frame = 0
Query:    2 VKINHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVPPANSG 49
            VKINHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVPP+NSG
Sbjct:  190 VKINHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVPPSNSG 237          
BLAST of mRNA_M-pyrifera_M_contig67800.16361.1 vs. uniprot
Match: A0A7S2XZP9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZP9_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 5.780e-19
Identity = 39/47 (82.98%), Postives = 44/47 (93.62%), Query Frame = 0
Query:    2 VKINHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVPPANS 48
            V+INHDGEVNRARYMPQN FVIATKSPS+DV VFD++KHPSVPP N+
Sbjct:  129 VRINHDGEVNRARYMPQNPFVIATKSPSSDVFVFDVTKHPSVPPPNT 175          
BLAST of mRNA_M-pyrifera_M_contig67800.16361.1 vs. uniprot
Match: A0A835ZEH9_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEH9_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 1.350e-17
Identity = 37/47 (78.72%), Postives = 42/47 (89.36%), Query Frame = 0
Query:    2 VKINHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVPPANS 48
            VK+NH+GEVNRARYMPQN FVIATK P ADVCVFD+S+HPSVP  N+
Sbjct:  131 VKLNHEGEVNRARYMPQNPFVIATKGPHADVCVFDVSRHPSVPANNT 177          
BLAST of mRNA_M-pyrifera_M_contig67800.16361.1 vs. uniprot
Match: A0A7S4E6Q4_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E6Q4_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 2.900e-16
Identity = 34/43 (79.07%), Postives = 41/43 (95.35%), Query Frame = 0
Query:    2 VKINHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVP 44
            +KINH+GE+NRARYMPQN F++ATKSPS+DV VFDISKHPS+P
Sbjct:  105 IKINHEGEINRARYMPQNPFILATKSPSSDVFVFDISKHPSLP 147          
BLAST of mRNA_M-pyrifera_M_contig67800.16361.1 vs. uniprot
Match: C1EE39_MICCC (NURF complex component n=3 Tax=Micromonas TaxID=38832 RepID=C1EE39_MICCC)

HSP 1 Score: 79.3 bits (194), Expect = 4.390e-16
Identity = 38/46 (82.61%), Postives = 40/46 (86.96%), Query Frame = 0
Query:    4 INHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVPPANSG 49
            INHDGEVNRARY PQNEFVIATK+ SADV VFD SKHPS PPA+ G
Sbjct:  121 INHDGEVNRARYCPQNEFVIATKTISADVYVFDYSKHPSKPPADGG 166          
BLAST of mRNA_M-pyrifera_M_contig67800.16361.1 vs. uniprot
Match: F0YI25_AURAN (Uncharacterized protein MUT11 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YI25_AURAN)

HSP 1 Score: 78.6 bits (192), Expect = 7.800e-16
Identity = 36/48 (75.00%), Postives = 40/48 (83.33%), Query Frame = 0
Query:    2 VKINHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVPPANSG 49
            +KI H GEVNRARYMPQN F++ATKSP ADV VFD+SKHPSVP A  G
Sbjct:  111 IKILHQGEVNRARYMPQNPFIVATKSPCADVFVFDMSKHPSVPSAGKG 158          
BLAST of mRNA_M-pyrifera_M_contig67800.16361.1 vs. uniprot
Match: A0A7M5V8C8_9CNID (CAF1C_H4-bd domain-containing protein n=3 Tax=Hydroidolina TaxID=37516 RepID=A0A7M5V8C8_9CNID)

HSP 1 Score: 78.6 bits (192), Expect = 8.300e-16
Identity = 34/48 (70.83%), Postives = 42/48 (87.50%), Query Frame = 0
Query:    2 VKINHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVPPANSG 49
            +KINH+GEVNRARYMPQN +VIATK+P++DV +FD +KHPS P  NSG
Sbjct:  120 IKINHEGEVNRARYMPQNPYVIATKTPTSDVLIFDYTKHPSKPDPNSG 167          
BLAST of mRNA_M-pyrifera_M_contig67800.16361.1 vs. uniprot
Match: A0A662XCD8_9STRA (CAF1C_H4-bd domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XCD8_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 1.210e-15
Identity = 35/48 (72.92%), Postives = 41/48 (85.42%), Query Frame = 0
Query:    2 VKINHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVPPANSG 49
            ++INHDGEVNRARYMP NEF++ATK+P A+V VFDISK PS P  NSG
Sbjct:  161 IRINHDGEVNRARYMPSNEFIVATKTPHAEVHVFDISKRPSQPEENSG 208          
BLAST of mRNA_M-pyrifera_M_contig67800.16361.1 vs. uniprot
Match: A0A3Q7ITN9_SOLLC (Uncharacterized protein n=1 Tax=Solanum lycopersicum TaxID=4081 RepID=A0A3Q7ITN9_SOLLC)

HSP 1 Score: 78.2 bits (191), Expect = 1.240e-15
Identity = 35/43 (81.40%), Postives = 39/43 (90.70%), Query Frame = 0
Query:    3 KINHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVPP 45
            +INHDGEVNRARYMPQN F+IATK+ SA+VCVFD SKHPS PP
Sbjct:  218 QINHDGEVNRARYMPQNPFIIATKTVSAEVCVFDYSKHPSKPP 260          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig67800.16361.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEI3_ECTSI1.290e-2497.92CAF1C_H4-bd domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5JAT4_9PHAE1.010e-2397.92CAF1C_H4-bd domain-containing protein n=1 Tax=Ecto... [more]
A0A7S2XZP9_9STRA5.780e-1982.98Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A835ZEH9_9STRA1.350e-1778.72WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A7S4E6Q4_9STRA2.900e-1679.07Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
C1EE39_MICCC4.390e-1682.61NURF complex component n=3 Tax=Micromonas TaxID=38... [more]
F0YI25_AURAN7.800e-1675.00Uncharacterized protein MUT11 n=1 Tax=Aureococcus ... [more]
A0A7M5V8C8_9CNID8.300e-1670.83CAF1C_H4-bd domain-containing protein n=3 Tax=Hydr... [more]
A0A662XCD8_9STRA1.210e-1572.92CAF1C_H4-bd domain-containing protein n=2 Tax=Noth... [more]
A0A3Q7ITN9_SOLLC1.240e-1581.40Uncharacterized protein n=1 Tax=Solanum lycopersic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..48
e-value: 1.5E-12
score: 49.3
NoneNo IPR availablePANTHERPTHR22850:SF82HISTONE-BINDING PROTEIN RBBP7coord: 2..45
NoneNo IPR availablePANTHERPTHR22850WD40 REPEAT FAMILYcoord: 2..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig67800contigM-pyrifera_M_contig67800:711..860 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig67800.16361.1mRNA_M-pyrifera_M_contig67800.16361.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig67800 699..860 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig67800.16361.1 ID=prot_M-pyrifera_M_contig67800.16361.1|Name=mRNA_M-pyrifera_M_contig67800.16361.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=50bp
MVKINHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVPPANSG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf