prot_M-pyrifera_M_contig67489.16294.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig67489.16294.1
Unique Nameprot_M-pyrifera_M_contig67489.16294.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length178
Homology
BLAST of mRNA_M-pyrifera_M_contig67489.16294.1 vs. uniprot
Match: A0A836CIT6_9STRA (Exonuclease-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIT6_9STRA)

HSP 1 Score: 162 bits (410), Expect = 2.790e-45
Identity = 88/179 (49.16%), Postives = 115/179 (64.25%), Query Frame = 0
Query:    3 ALVAVDVEFVMVATPRTVLRADGTFARQSPARLTVARVSAVDADGKTLLDDFILPCEPVVDCLTRFSGILPSDLDP---SGPRTLLLPRALLKIRALVDSGCTIVGHGLDGDFSALGIRPHPDQVRDTLQLLRLPAHRALSLRFLAAHLLGERVQEGAHDSVEDARTALRLFQAYHTLK 178
            A+VA+D EFV +      LR+DG+     PAR  +ARVS VDA+G+ ++DD+I+  EPV+D LTRFSG++  DL+P     P  + L  A LK+R LVD GC +VGHGL  D   + +   P QV DT ++  LP  R  SLRFL+ +LL ER+QE  HDSVED+R AL L Q Y  LK
Sbjct:  169 AVVALDAEFVCLEMEEVRLRSDGSRVVTKPARQGLARVSVVDAEGQVIIDDYIIQTEPVLDHLTRFSGVVAEDLNPFLSQRPSLVPLRAAYLKLRCLVDRGCVLVGHGLAKDLRVINLVVPPSQVLDTAEMWSLPGRRKASLRFLSHYLLSERIQESTHDSVEDSRMALALCQKYEKLK 347          
BLAST of mRNA_M-pyrifera_M_contig67489.16294.1 vs. uniprot
Match: A0A7S3LR56_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LR56_9STRA)

HSP 1 Score: 161 bits (408), Expect = 3.870e-44
Identity = 87/177 (49.15%), Postives = 118/177 (66.67%), Query Frame = 0
Query:    4 LVAVDVEFVMVATPRTVLRADGTFARQSPARLTVARVSAVDADGKTLLDDFILPCEPVVDCLTRFSGILPSDLDPSGPRTLLLPR--ALLKIRALVDSGCTIVGHGLDGDFSALGIRPHPDQVRDTLQLLRLPAHRALSLRFLAAHLLGERVQEGAHDSVEDARTALRLFQAYHTLK 178
            LVA+D EFV ++T    + ADGT    +P RL++ARVS +  DG   +DD+I+  E V D LTRFSG++P DLDP   +  L+P   A +K+R LVD GC  VGHGL+ DF  + I   P+ + DT++L  L  HR LSL FLA++LL E++Q   HDS+EDARTAL+L+Q Y T +
Sbjct:  296 LVAIDCEFVALSTEEFKVLADGTRVVTAPPRLSLARVSCLSGDGTVFIDDYIVTPENVEDHLTRFSGLVPGDLDPKSSKHHLIPLRIAYMKLRHLVDRGCIFVGHGLNKDFRVINIFVPPENILDTVELFYL-GHRKLSLAFLASYLLEEKIQGRIHDSIEDARTALKLYQKYETFR 471          
BLAST of mRNA_M-pyrifera_M_contig67489.16294.1 vs. uniprot
Match: A0A7S2XJ56_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XJ56_9STRA)

HSP 1 Score: 153 bits (386), Expect = 1.450e-43
Identity = 85/171 (49.71%), Postives = 113/171 (66.08%), Query Frame = 0
Query:    4 LVAVDVEFVMVATPRTVLRADGTFARQSPARLTVARVSAVDA-DGKTLLDDFILPCEPVVDCLTRFSGILPSDLDPS-GPRTLLLPR-ALLKIRALVDSGCTIVGHGLDGDFSALGIRPHPDQVRDTLQLLRLPAHRALSLRFLAAHLLGERVQEGAHDSVEDARTALRLF 171
            L+AVD EFV V   ++ L A G+    S ARL +AR+S +D   G  ++DD +LP EPVVD LTRFSGI+ SDL+PS  PR L+  R A LK+R L+D GC  VGHGL+ DF  + +   P Q+ DT+++ R    R +SLRFLA H+LG  +Q+  HDS+EDAR A  L+
Sbjct:   14 LIAVDAEFVSVQHEQSALAATGSKETISEARLALARISVIDCRTGNVIIDDHVLPREPVVDYLTRFSGIVKSDLEPSTSPRHLVTTRNAYLKLRLLLDRGCIFVGHGLNQDFFIVNLFVPPSQIIDTVEIFRQDRMRKISLRFLANHVLGRDMQQNTHDSIEDARAAFELY 184          
BLAST of mRNA_M-pyrifera_M_contig67489.16294.1 vs. uniprot
Match: A0A2H8TLC2_9HEMI (PAB-dependent poly(A)-specific ribonuclease subunit 2 (Fragment) n=1 Tax=Melanaphis sacchari TaxID=742174 RepID=A0A2H8TLC2_9HEMI)

HSP 1 Score: 149 bits (377), Expect = 2.950e-42
Identity = 84/181 (46.41%), Postives = 110/181 (60.77%), Query Frame = 0
Query:    4 LVAVDVEFVMVATPRTVLRADGTFARQSPARLTVARVSAVDADG----KTLLDDFILPCEPVVDCLTRFSGILPSDLD--PSGPRTLLLPRALLKIRALVDSGCTIVGHGLDGDFSALGIRPHPDQVRDTLQLLRLPAHRALSLRFLAAHLLGERVQEGAHDSVEDARTALRLFQAYHTLK 178
            LVA+D EFV +    + LR+DG  A   P ++ VAR+S +  +G    K  +DD+I   E VVD LT+FSGI P DLD   S      L    +K+R LVD+G   +GHGL  DF  + +   P+QV DT+ L RLP  R +SLRFLA H LG ++Q   HDSVEDAR AL+L+Q Y  L+
Sbjct:   10 LVAIDAEFVTLNQEESELRSDGRLATIKPVQMAVARISCIRGEGPNEGKPFIDDYISTQEQVVDYLTKFSGINPGDLDISKSSKNLTTLKSTYMKLRYLVDNGIKFIGHGLYNDFRMINLMVPPEQVIDTVALFRLPHQRNVSLRFLAWHFLGNKIQSLTHDSVEDARAALQLYQCYKKLE 190          
BLAST of mRNA_M-pyrifera_M_contig67489.16294.1 vs. uniprot
Match: A0A7S0PQM6_9CHLO (Hypothetical protein (Fragment) n=2 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0PQM6_9CHLO)

HSP 1 Score: 158 bits (399), Expect = 1.760e-41
Identity = 89/184 (48.37%), Postives = 116/184 (63.04%), Query Frame = 0
Query:    1 PPALVAVDVEFVMVATPRTVLRADGTFARQSPARLTVARVSAVDADGKT----LLDDFILPCEPVVDCLTRFSGILPSDLDPS-GPRTLL-LPRALLKIRALVDSGCTIVGHGLDGDFSALGIRPHPDQVRDTLQLLRLPAHRALSLRFLAAHLLGERVQEGAHDSVEDARTALRLFQAYHTLK 178
            P  L+ +D EFV +A P   +R DGT     PARL +ARVS V   G      ++DD+I   EPV D LTRFSG++P DLDPS  P  +  L  A LK+R L+D+GC  VGHGL  DF  + I   P+QV DT++L      R LSL+FLA +LLGE +Q   HDS+EDARTA++L++ Y  L+
Sbjct:  927 PGVLLGIDAEFVSLAPPVMAMRDDGTEYESVPARLGLARVSVVRGQGDKKLTPIIDDYIRAVEPVHDYLTRFSGLVPGDLDPSMSPHFITQLKHAYLKLRYLIDAGCIFVGHGLKQDFKMINIVVPPEQVIDTVELFHFKRQRKLSLKFLATYLLGEDIQAETHDSIEDARTAVKLYEKYLDLQ 1110          
BLAST of mRNA_M-pyrifera_M_contig67489.16294.1 vs. uniprot
Match: A0A7R9XRA7_9CHLO (Hypothetical protein n=2 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A0A7R9XRA7_9CHLO)

HSP 1 Score: 157 bits (396), Expect = 4.450e-41
Identity = 88/184 (47.83%), Postives = 115/184 (62.50%), Query Frame = 0
Query:    1 PPALVAVDVEFVMVATPRTVLRADGTFARQSPARLTVARVSAVDADGKT----LLDDFILPCEPVVDCLTRFSGILPSDLDPSGPRTLL--LPRALLKIRALVDSGCTIVGHGLDGDFSALGIRPHPDQVRDTLQLLRLPAHRALSLRFLAAHLLGERVQEGAHDSVEDARTALRLFQAYHTLK 178
            P  L+ +D EFV +A P    R DGT     PARL +ARVS V   G      ++DD+I   EPV D LTRFSG++P DLDP+  R  +  L  A LK+R L+D+GC  VGHGL  DF  + I   P+QV DT++L      R LSL+FLA +LLGE +Q   HDS+EDARTA++L++ Y  L+
Sbjct:  851 PGVLLGIDAEFVSLAPPIMSTRDDGTEYESVPARLGLARVSVVRGHGDKKLTPIIDDYIRAVEPVHDYLTRFSGLVPGDLDPATSRHFITQLKHAYLKLRYLIDAGCIFVGHGLKQDFKMINIVVPPEQVIDTVELFHFKRQRKLSLKFLATYLLGEDIQGETHDSIEDARTAVKLYEKYLDLQ 1034          
BLAST of mRNA_M-pyrifera_M_contig67489.16294.1 vs. uniprot
Match: A0A090M395_OSTTA (Exonuclease, RNase T/DNA polymerase III n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090M395_OSTTA)

HSP 1 Score: 156 bits (394), Expect = 8.360e-41
Identity = 88/184 (47.83%), Postives = 116/184 (63.04%), Query Frame = 0
Query:    1 PPALVAVDVEFVMVATPRTVLRADGTFARQSPARLTVARVSAVDADGKT----LLDDFILPCEPVVDCLTRFSGILPSDLDPS-GPRTLL-LPRALLKIRALVDSGCTIVGHGLDGDFSALGIRPHPDQVRDTLQLLRLPAHRALSLRFLAAHLLGERVQEGAHDSVEDARTALRLFQAYHTLK 178
            P  L+ +D EFV +A     +R DGT     PARL +ARVS V   G+     ++DD+I   EPV D LTRFSG++P DLDP+  P  +  L  A LK+R L+D+GC  VGHGL  DF  + I   PDQV DT++L      R LSL+FLA +LLGE +Q   HDS+EDARTA++L++ Y  L+
Sbjct:  931 PGMLLGIDAEFVSLAPAIMAVRDDGTEYESVPARLGLARVSVVRGQGQQKLTPIIDDYIRAVEPVHDYLTRFSGLVPGDLDPATSPHFITQLKHAYLKLRYLIDAGCIFVGHGLKQDFKMINIVVPPDQVIDTVELFHFKRQRKLSLKFLATNLLGEEIQGETHDSIEDARTAIKLYETYLDLQ 1114          
BLAST of mRNA_M-pyrifera_M_contig67489.16294.1 vs. uniprot
Match: A0A1Y1IDX2_KLENI (USP domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IDX2_KLENI)

HSP 1 Score: 154 bits (390), Expect = 2.880e-40
Identity = 87/180 (48.33%), Postives = 114/180 (63.33%), Query Frame = 0
Query:    4 LVAVDVEFVMVATPRTVLRADGTFARQSPARLTVARVSAVDADGK----TLLDDFILPCEPVVDCLTRFSGILPSDLDP--SGPRTLLLPRALLKIRALVDSGCTIVGHGLDGDFSALGIRPHPDQVRDTLQLLRLPAHRALSLRFLAAHLLGERVQEGAHDSVEDARTALRLFQAYHTL 177
            L+ +D EFV +A   T LR DG+ A   PARL +ARVS V  +G+      +DD+I   EPV D LTR+SG+ P DLDP  S      L +A LK+R LVD+GC  VGHGL  DF  + +   P+Q+ DT++L  L   R +SLRFLA++LL   +Q+  HDS+EDARTALRL+  Y  L
Sbjct: 1051 LLGIDAEFVALAPAETELREDGSAAVLRPARLGLARVSVVRGEGERAGGACMDDYIRAVEPVYDYLTRYSGLRPGDLDPGVSAHHITTLKKAYLKLRYLVDTGCRFVGHGLKKDFRMINLVVPPEQIVDTVELFHLKRQRKISLRFLASYLLKLDIQKETHDSIEDARTALRLYAMYKQL 1230          
BLAST of mRNA_M-pyrifera_M_contig67489.16294.1 vs. uniprot
Match: A0A7S2HCV8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HCV8_9STRA)

HSP 1 Score: 146 bits (368), Expect = 3.380e-40
Identity = 86/177 (48.59%), Postives = 110/177 (62.15%), Query Frame = 0
Query:    5 VAVDVEFVMVATPRTVLRADGTFARQSPARLTVARVSAVDA-DGKTLLDDFILPCEPVVDCLTRFSGILPSDLDP--SGPRTLLLPRALLKIRALVDSGCTIVGHGLDGDFSALGIRPHPDQVRDTLQLLRLPAHRALSLRFLAAHLLGERVQEGAHDSVEDARTALRLFQAYHTLK 178
            VA+D EFV VA   + + ADG       AR  +ARVSA+DA   + ++DD+ILP EP+VD  TRFSG+  +DLDP  S    + L  A LK+R LVD G   VGHGL GDF  + +   P Q+ DT+ L  LP  R +SLRFLAA LL   +Q   HDS+EDAR AL L++ Y  L+
Sbjct:   59 VALDTEFVSVAVEESFIDADGAEHVNVEARQMLARVSAIDARTNEVIIDDYILPTEPIVDYKTRFSGLTATDLDPLTSHHHLVHLRTAYLKLRLLVDKGAIFVGHGLRGDFRVVNMFVPPSQIADTVDLWYLPGQRKISLRFLAACLLDTDIQGETHDSIEDARGALLLYKRYIELQ 235          
BLAST of mRNA_M-pyrifera_M_contig67489.16294.1 vs. uniprot
Match: A0A2S2RB83_9HEMI (PAB-dependent poly(A)-specific ribonuclease subunit 2 n=1 Tax=Sipha flava TaxID=143950 RepID=A0A2S2RB83_9HEMI)

HSP 1 Score: 150 bits (378), Expect = 4.810e-40
Identity = 84/181 (46.41%), Postives = 110/181 (60.77%), Query Frame = 0
Query:    4 LVAVDVEFVMVATPRTVLRADGTFARQSPARLTVARVSAVDADG----KTLLDDFILPCEPVVDCLTRFSGILPSDLD--PSGPRTLLLPRALLKIRALVDSGCTIVGHGLDGDFSALGIRPHPDQVRDTLQLLRLPAHRALSLRFLAAHLLGERVQEGAHDSVEDARTALRLFQAYHTLK 178
            LVA+D EFV +    + LR+DG  A   P ++ VAR+S +  +G    K  +DD+I   E VVD LT+FSGI P DLD   S      L    +K+R LVD+G   +GHGL  DF  + +   P+QV DT+ L RLP  R +SLRFLA H LG ++Q   HDSVEDAR AL+L+Q Y  L+
Sbjct:  248 LVAIDAEFVTLNQEESELRSDGRLATIKPVQMAVARISCIRGEGQHEGKPFIDDYISTQEQVVDYLTKFSGINPGDLDISKSSKNLTTLKSTYMKLRYLVDNGIKFIGHGLYNDFRMINLMVSPEQVIDTVALFRLPHQRNVSLRFLAWHFLGNKIQSLTHDSVEDARAALQLYQCYKKLE 428          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig67489.16294.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CIT6_9STRA2.790e-4549.16Exonuclease-domain-containing protein n=1 Tax=Trib... [more]
A0A7S3LR56_9STRA3.870e-4449.15Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A7S2XJ56_9STRA1.450e-4349.71Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A2H8TLC2_9HEMI2.950e-4246.41PAB-dependent poly(A)-specific ribonuclease subuni... [more]
A0A7S0PQM6_9CHLO1.760e-4148.37Hypothetical protein (Fragment) n=2 Tax=Ostreococc... [more]
A0A7R9XRA7_9CHLO4.450e-4147.83Hypothetical protein n=2 Tax=Ostreococcus sp. 'luc... [more]
A0A090M395_OSTTA8.360e-4147.83Exonuclease, RNase T/DNA polymerase III n=2 Tax=Os... [more]
A0A1Y1IDX2_KLENI2.880e-4048.33USP domain-containing protein n=1 Tax=Klebsormidiu... [more]
A0A7S2HCV8_9STRA3.380e-4048.59Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A2S2RB83_9HEMI4.810e-4046.41PAB-dependent poly(A)-specific ribonuclease subuni... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013520Exonuclease, RNase T/DNA polymerase IIISMARTSM00479exoiiienduscoord: 3..178
e-value: 4.2E-15
score: 66.2
IPR013520Exonuclease, RNase T/DNA polymerase IIIPFAMPF00929RNase_Tcoord: 5..171
e-value: 3.3E-11
score: 44.0
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 3..178
e-value: 2.1E-37
score: 130.3
NoneNo IPR availablePANTHERPTHR15728UBIQUITIN SPECIFIC PROTEASE 52 / POLY A RIBONUCLEASE SUBUNIT PAN2coord: 3..178
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 3..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig67489contigM-pyrifera_M_contig67489:1..534 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig67489.16294.1mRNA_M-pyrifera_M_contig67489.16294.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig67489 1..534 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig67489.16294.1 ID=prot_M-pyrifera_M_contig67489.16294.1|Name=mRNA_M-pyrifera_M_contig67489.16294.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=178bp
PPALVAVDVEFVMVATPRTVLRADGTFARQSPARLTVARVSAVDADGKTL
LDDFILPCEPVVDCLTRFSGILPSDLDPSGPRTLLLPRALLKIRALVDSG
CTIVGHGLDGDFSALGIRPHPDQVRDTLQLLRLPAHRALSLRFLAAHLLG
ERVQEGAHDSVEDARTALRLFQAYHTLK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013520Exonuclease_RNaseT/DNA_pol3
IPR036397RNaseH_sf
IPR012337RNaseH-like_sf