prot_M-pyrifera_M_contig6608.16042.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig6608.16042.1
Unique Nameprot_M-pyrifera_M_contig6608.16042.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length566
Homology
BLAST of mRNA_M-pyrifera_M_contig6608.16042.1 vs. uniprot
Match: D7FHX8_ECTSI (PA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHX8_ECTSI)

HSP 1 Score: 277 bits (708), Expect = 2.460e-82
Identity = 231/606 (38.12%), Postives = 289/606 (47.69%), Query Frame = 0
Query:    1 QEHALWHLAYSTGPLSAEKANVSVSAFGSKPHGCDTLPVVVAHPEDGCSPLHNAEQVVGAHVLVRRGGCSFLAKAIRISNAGGRSLVVIDEGAGRLKMEAEQRQTVDIPVVMVSKLKGESLANMATSTSRATGKVTAMLVMTAVCLSQNA-APQHHRISAQHPPSIVGGTNFVPVGFGRAFGGNGSGGAVPTAVTG-QRIEASIEPAANEEL------ASPART-TLDKEARAENTETSE----EVAVVTGAGAIRRGSGG-----EG------FVPCRQKPSGPLRGGDLILGLSIEFVSTSV-------SGQLLSVDRQDGESRHEGNSADNPDALPAHSAAKGT-MLLLPPDPACSITNQMRTGVKLGAAVLIIIAGETDENMAAAASSATKSAFTDVFSSSESPPSERIENGVDTISAPREDRPHSERAGQSGKAGGGREARAEAGGGVLGSVADHANGASAVPEEPPVDACPPLIVVVGHAEGNRVLEWLRGVRSAVTGDRTDDDDGGDNR---VTASLAAREDVGRLWGDVLWASDPRNWPAGAKQRQRILNRLRKTHSTEHAGR---GSRTASAIRWSLLERAYAALDGA--AGGSSRP 566
            QE A WHL+ STGPL +   +V+V+AFG +   C  LPVV A PEDGC PL NA+QV GAHVLVRRG CSFLAKA+ +SN+GG S+VV DEGAGRL+MEAE+ QTV IPVVMVSKL GE+L  +A STSRATGKVTA LV+ A CL +   AP   R   +  P +  G+  +P+   R    N + G    A T  +R   +IE AA E++       SP+   T   +  AE  +T      +V V+T  G      GG     EG         CRQ+ SG LRGGDL   L++E  ST++       SG   +V    G   +  +  ++    PA S  KGT +LLLPPDPACSI +Q                                                                                                                           EG  +L W+  VR    G  + +   G N    VT  +  R ++G+LWGDV+WASD  NWP G+KQR+RILNRLRKTHS EH GR    SRT SA RWSL+ERAYAAL     AG S++P
Sbjct:   56 QEQAPWHLSLSTGPLPSGTVDVTVAAFGGEADSCAALPVVSAIPEDGCLPLLNAQQVKGAHVLVRRGRCSFLAKALAVSNSGGASVVVADEGAGRLRMEAEEGQTVGIPVVMVSKLDGEALQKLAASTSRATGKVTATLVINAACLHRGKPAPSPRR---EISPPLERGSRRLPIPGAR----NPASGEEDKAPTDDKRGPPAIEMAAGEKINNQRGDVSPSLVATPPGQGEAEVADTPAAARADVEVITNRGGEEDRGGGKEVEEEGGKERLTLPECRQRSSGQLRGGDLT-PLNLEEESTTIPEMDSPGSGTTATVAILGGPCDNTRSPHEDETTSPAVSKMKGTTVLLLPPDPACSIESQ---------------------------------------------------------------------------------------------------------------------------EGKHLLGWVLRVRGGGDGSGSGERSFGGNGGGVVTVDMVERHELGKLWGDVVWASDLTNWPKGSKQRRRILNRLRKTHSPEHVGRDGASSRTESATRWSLVERAYAALQDTDDAGDSTKP 530          
BLAST of mRNA_M-pyrifera_M_contig6608.16042.1 vs. uniprot
Match: A0A8J4XVE5_CHIOP (Protease-associated domain-containing protein 1 n=1 Tax=Chionoecetes opilio TaxID=41210 RepID=A0A8J4XVE5_CHIOP)

HSP 1 Score: 57.0 bits (136), Expect = 3.220e-6
Identity = 26/52 (50.00%), Postives = 39/52 (75.00%), Query Frame = 0
Query:   39 VVVAHPEDGCSPLHNAEQVVGAHVLVRRGGCSFLAKAIRISNAGGRSLVVID 90
            +V+A P D CSP +NA ++ GA VLV RGGCSF++KA++   AG  +++V+D
Sbjct:   48 LVLADPLDSCSPPYNALELQGAVVLVARGGCSFVSKAVKAEAAGALAVIVMD 99          
BLAST of mRNA_M-pyrifera_M_contig6608.16042.1 vs. uniprot
Match: UPI001B7E159A (protease-associated domain-containing protein 1-like n=1 Tax=Polyodon spathula TaxID=7913 RepID=UPI001B7E159A)

HSP 1 Score: 57.4 bits (137), Expect = 3.730e-6
Identity = 25/52 (48.08%), Postives = 37/52 (71.15%), Query Frame = 0
Query:   39 VVVAHPEDGCSPLHNAEQVVGAHVLVRRGGCSFLAKAIRISNAGGRSLVVID 90
            +V+A P DGC+ L NA  + G   L+ RGGCSFL+KA R+  AGG+++++ D
Sbjct:   69 LVLAEPPDGCTDLRNAALLEGQITLLERGGCSFLSKARRVEEAGGKAVLIAD 120          
BLAST of mRNA_M-pyrifera_M_contig6608.16042.1 vs. uniprot
Match: UPI00145A91F1 (protease-associated domain-containing protein 1-like n=2 Tax=Acipenser ruthenus TaxID=7906 RepID=UPI00145A91F1)

HSP 1 Score: 57.0 bits (136), Expect = 1.040e-5
Identity = 25/52 (48.08%), Postives = 37/52 (71.15%), Query Frame = 0
Query:   39 VVVAHPEDGCSPLHNAEQVVGAHVLVRRGGCSFLAKAIRISNAGGRSLVVID 90
            +V+A P DGC+ L NA  + G   L+ RGGCSFL+KA R+  AGG+++++ D
Sbjct:   69 LVLAEPPDGCAELRNAAFLEGQVTLLERGGCSFLSKARRVEEAGGKAVLIAD 120          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6608.16042.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FHX8_ECTSI2.460e-8238.12PA domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A8J4XVE5_CHIOP3.220e-650.00Protease-associated domain-containing protein 1 n=... [more]
UPI001B7E159A3.730e-648.08protease-associated domain-containing protein 1-li... [more]
UPI00145A91F11.040e-548.08protease-associated domain-containing protein 1-li... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003137PA domainPFAMPF02225PAcoord: 38..121
e-value: 3.1E-6
score: 27.1
NoneNo IPR availableGENE3D3.50.30.30coord: 7..142
e-value: 1.7E-18
score: 68.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig6608contigM-pyrifera_M_contig6608:6824..11429 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig6608.16042.1mRNA_M-pyrifera_M_contig6608.16042.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig6608 6824..11429 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig6608.16042.1 ID=prot_M-pyrifera_M_contig6608.16042.1|Name=mRNA_M-pyrifera_M_contig6608.16042.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=566bp
QEHALWHLAYSTGPLSAEKANVSVSAFGSKPHGCDTLPVVVAHPEDGCSP
LHNAEQVVGAHVLVRRGGCSFLAKAIRISNAGGRSLVVIDEGAGRLKMEA
EQRQTVDIPVVMVSKLKGESLANMATSTSRATGKVTAMLVMTAVCLSQNA
APQHHRISAQHPPSIVGGTNFVPVGFGRAFGGNGSGGAVPTAVTGQRIEA
SIEPAANEELASPARTTLDKEARAENTETSEEVAVVTGAGAIRRGSGGEG
FVPCRQKPSGPLRGGDLILGLSIEFVSTSVSGQLLSVDRQDGESRHEGNS
ADNPDALPAHSAAKGTMLLLPPDPACSITNQMRTGVKLGAAVLIIIAGET
DENMAAAASSATKSAFTDVFSSSESPPSERIENGVDTISAPREDRPHSER
AGQSGKAGGGREARAEAGGGVLGSVADHANGASAVPEEPPVDACPPLIVV
VGHAEGNRVLEWLRGVRSAVTGDRTDDDDGGDNRVTASLAAREDVGRLWG
DVLWASDPRNWPAGAKQRQRILNRLRKTHSTEHAGRGSRTASAIRWSLLE
RAYAALDGAAGGSSRP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003137PA_domain